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The map label for this gene is sepF [H]

Identifier: 125624830

GI number: 125624830

Start: 2040903

End: 2041493

Strand: Reverse

Name: sepF [H]

Synonym: llmg_2058

Alternate gene names: 125624830

Gene position: 2041493-2040903 (Counterclockwise)

Preceding gene: 125624831

Following gene: 125624829

Centisome position: 80.71

GC content: 41.29

Gene sequence:

>591_bases
ATGGCATTTAAAGATTGGATGAATAATCTACGAGATTATTTTGTAGAGGATGATGAAGAGTTCAACGAACCTACACGTCC
TGTGCAAGAATCTAGGCCAACGGTGGCATCTACGCCAAAACCAAAGGTTGAAGAGCGGAAAGTGCAAGCAGACTATCAAA
GTCGTCGCCCAGCACAAACAACTCCAAAACCGCAAACACAAACAGCAGCGCCAAAACGCTCTGCTTCAACTTTCTCAAAA
CCTATGCCTGAAAAAATCGTACAACAACAAACCGTTTCGCAAGCTCAATCATTAGCTGCAACGGTCTCTACTATTGCAAT
TAAAGAACCACGTGCCTATGCAGACATCATGGAATCAGCACGCATCGTCAAAAATGGCGAATGTGTACTTGTCAATTTTA
AATTTATGGGTGACGCTCAAGCGCGTCGTTCAATTGACTTCATGACTGGGGTGGTCTTTACCCTTGATGGTGATATTCAA
AATGTGGGTGGTCAAATTTTCTTGATGACTCCAGCGAATATTACAGTTGATGCAGCAAAAGAAATGTCTATCTTAGCTGG
TCAAAATTTTGAAAGTTATGATATTTACTAA

Upstream 100 bases:

>100_bases
TGAAATTGCCATTAAAAATGGAGCAACTTTTGTTCGAATCGGCACAGAATTTTTTAAAGATTTATAAGCTTAAAGATTAA
CGTAAACAACGGAGGAAAAT

Downstream 100 bases:

>100_bases
TGCCTATTATAATTACAATAATAAACTGGCTTTTACGTTTATTGGATTTTTATTCAATTATTTTAATAATTTATGCCTTG
ATGAGTTGGATTCCAAATCT

Product: Ycf50-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MAFKDWMNNLRDYFVEDDEEFNEPTRPVQESRPTVASTPKPKVEERKVQADYQSRRPAQTTPKPQTQTAAPKRSASTFSK
PMPEKIVQQQTVSQAQSLAATVSTIAIKEPRAYADIMESARIVKNGECVLVNFKFMGDAQARRSIDFMTGVVFTLDGDIQ
NVGGQIFLMTPANITVDAAKEMSILAGQNFESYDIY

Sequences:

>Translated_196_residues
MAFKDWMNNLRDYFVEDDEEFNEPTRPVQESRPTVASTPKPKVEERKVQADYQSRRPAQTTPKPQTQTAAPKRSASTFSK
PMPEKIVQQQTVSQAQSLAATVSTIAIKEPRAYADIMESARIVKNGECVLVNFKFMGDAQARRSIDFMTGVVFTLDGDIQ
NVGGQIFLMTPANITVDAAKEMSILAGQNFESYDIY
>Mature_195_residues
AFKDWMNNLRDYFVEDDEEFNEPTRPVQESRPTVASTPKPKVEERKVQADYQSRRPAQTTPKPQTQTAAPKRSASTFSKP
MPEKIVQQQTVSQAQSLAATVSTIAIKEPRAYADIMESARIVKNGECVLVNFKFMGDAQARRSIDFMTGVVFTLDGDIQN
VGGQIFLMTPANITVDAAKEMSILAGQNFESYDIY

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA [H]

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023052
- InterPro:   IPR007561 [H]

Pfam domain/function: PF04472 DUF552 [H]

EC number: NA

Molecular weight: Translated: 21938; Mature: 21807

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFKDWMNNLRDYFVEDDEEFNEPTRPVQESRPTVASTPKPKVEERKVQADYQSRRPAQT
CCHHHHHHHHHHHCCCCCHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
TPKPQTQTAAPKRSASTFSKPMPEKIVQQQTVSQAQSLAATVSTIAIKEPRAYADIMESA
CCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RIVKNGECVLVNFKFMGDAQARRSIDFMTGVVFTLDGDIQNVGGQIFLMTPANITVDAAK
HEECCCCEEEEEEEECCCHHHHHHHHHHHEEEEEECCCHHHCCCEEEEEECCCEEEHHHH
EMSILAGQNFESYDIY
HHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AFKDWMNNLRDYFVEDDEEFNEPTRPVQESRPTVASTPKPKVEERKVQADYQSRRPAQT
CHHHHHHHHHHHCCCCCHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
TPKPQTQTAAPKRSASTFSKPMPEKIVQQQTVSQAQSLAATVSTIAIKEPRAYADIMESA
CCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RIVKNGECVLVNFKFMGDAQARRSIDFMTGVVFTLDGDIQNVGGQIFLMTPANITVDAAK
HEECCCCEEEEEEEECCCHHHHHHHHHHHEEEEEECCCHHHCCCEEEEEECCCEEEHHHH
EMSILAGQNFESYDIY
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]