Click here to switch to the map view.

The map label for this gene is atpH [H]

Identifier: 125624728

GI number: 125624728

Start: 1931675

End: 1932202

Strand: Reverse

Name: atpH [H]

Synonym: llmg_1949

Alternate gene names: 125624728

Gene position: 1932202-1931675 (Counterclockwise)

Preceding gene: 125624729

Following gene: 125624727

Centisome position: 76.39

GC content: 32.95

Gene sequence:

>528_bases
ATGACAAAAGTAAATTCACAAAAATACAGTAAAGCTTTACTTGAGGTCGCCCAAGAAAAAGGACAACTTGAAGCAATTCT
TACTGAAGTTAGCGAAATGATTCAGCTTTTCAAAGAAAATAACTTAGGTGCTTTTTTAGCAAATGAAGTTTATTCATTCT
CTGCTAAATCTGAATTGATTGATACTTTGCTTCAAACTTCATCAGAAGTGATGTCAAATTTCCTGAATACTATTCGTTCT
AATGGACGTCTAGCTGACCTCGGAGAAATACTTGAAGAAACTAAAAATGCAGCAGATGACATGTTCAAAATTGCTGACGT
TGAAGTTGTTTCAAGTATTGCATTGTCAGAAGCTCAAATTGAAAAATTTAAAGCAATGGCTAAATCAAAATTTGATTTAA
ACGAAGTAACAGTAATTAATACAGTCAATGAAAAAATTCTCGGAGGATTCATTGTGAACTCTCGTGGAAAAATTATTGAC
GCCTCATTAAAAACACAATTGGCTAAAATCGCCGCTGAAATCCTCTAA

Upstream 100 bases:

>100_bases
ATCTCAGTTCAAATTGCTGAAAAGCTCATTGGACAATCATTAGATGCTTCTGCACAACAGGAATTAATCGACTCTTATCT
CGCTAAGTTAGGAGAATAAG

Downstream 100 bases:

>100_bases
TCAGGATAGAAAAATTTTCTTCCTTTGTTAAAAACTTAGTGGAGAATTTTTCAAACTCAAACTGTTAAACTTTTGAAAAC
ATGCAAAGGTAATTTTAAAA

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MTKVNSQKYSKALLEVAQEKGQLEAILTEVSEMIQLFKENNLGAFLANEVYSFSAKSELIDTLLQTSSEVMSNFLNTIRS
NGRLADLGEILEETKNAADDMFKIADVEVVSSIALSEAQIEKFKAMAKSKFDLNEVTVINTVNEKILGGFIVNSRGKIID
ASLKTQLAKIAAEIL

Sequences:

>Translated_175_residues
MTKVNSQKYSKALLEVAQEKGQLEAILTEVSEMIQLFKENNLGAFLANEVYSFSAKSELIDTLLQTSSEVMSNFLNTIRS
NGRLADLGEILEETKNAADDMFKIADVEVVSSIALSEAQIEKFKAMAKSKFDLNEVTVINTVNEKILGGFIVNSRGKIID
ASLKTQLAKIAAEIL
>Mature_174_residues
TKVNSQKYSKALLEVAQEKGQLEAILTEVSEMIQLFKENNLGAFLANEVYSFSAKSELIDTLLQTSSEVMSNFLNTIRSN
GRLADLGEILEETKNAADDMFKIADVEVVSSIALSEAQIEKFKAMAKSKFDLNEVTVINTVNEKILGGFIVNSRGKIIDA
SLKTQLAKIAAEIL

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19225; Mature: 19094

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVNSQKYSKALLEVAQEKGQLEAILTEVSEMIQLFKENNLGAFLANEVYSFSAKSELI
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DTLLQTSSEVMSNFLNTIRSNGRLADLGEILEETKNAADDMFKIADVEVVSSIALSEAQI
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKFKAMAKSKFDLNEVTVINTVNEKILGGFIVNSRGKIIDASLKTQLAKIAAEIL
HHHHHHHHCCCCCCHHHEEHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TKVNSQKYSKALLEVAQEKGQLEAILTEVSEMIQLFKENNLGAFLANEVYSFSAKSELI
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DTLLQTSSEVMSNFLNTIRSNGRLADLGEILEETKNAADDMFKIADVEVVSSIALSEAQI
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKFKAMAKSKFDLNEVTVINTVNEKILGGFIVNSRGKIIDASLKTQLAKIAAEIL
HHHHHHHHCCCCCCHHHEEHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]