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The map label for this gene is yrrM [H]

Identifier: 125624691

GI number: 125624691

Start: 1886991

End: 1887683

Strand: Reverse

Name: yrrM [H]

Synonym: llmg_1908

Alternate gene names: 125624691

Gene position: 1887683-1886991 (Counterclockwise)

Preceding gene: 125624692

Following gene: 125624690

Centisome position: 74.63

GC content: 36.22

Gene sequence:

>693_bases
ATGGTTGAAACATATAAGAGCACAAGTAACCCCATGATGAATCGACCAGTTGTCAAAGCCGAGTTAGTCGAATGGATGCG
TTCAAGTCAAACACAAGTGACTGGAGAACTTGCAGAAGTCCTAAACTTTGCTAAAGAAAATAACATTCCTGTTATTCCAC
ATGAAACAGTTCTCTATTTTCAAATGCTATTGAGTCTGCTCAAGCCTAAAAGAATTCTGGAAATTGGGACAGCTATTGGT
TTTTCAGCCTTAGTAATGGCACAAGAAGTTCCAGAAGCTGAGATTGTGACCATCGATCGTAATCCTGAAATGATTGAGCT
AGCCAAGAAAAATTTAACTAAATACGATCACCGCAATCAAATTCAGCTTAAAGAAGGAGATGCTGCAGATGTTTTGCAAG
AATTAAAAGGTCCATTTGATCTTGTTTTCATGGATTCAGCCAAGTCGAAATATGTTGAATTCTTACCTAAATCACTTGAA
TTGCTTTCAGAAAATGGCCTTATCCTAATGGATGATGTTTTTCAAGCTGGTGAAATATTGTTGCCAATCATGGAAGTTAA
AAGAAATCAACGAGCTTTGGAACGAGGCTTAAGAAAACTTTTTGATGAAGTTTTTGATAATCCTAAATATATGACCAGCG
TTCTTCCGCTAGGTGATGGATTATTAATGATAAAAAAGCATAAAAATTGCTGA

Upstream 100 bases:

>100_bases
ATATGGAATCTACAGATTACTTAGAGTCTGCTTTTAAGCTTTTTGAAAAACGTTTGAATGAATTAGAAAAATTAGTTGAA
AAAGGAGTCCATCTTTAAAA

Downstream 100 bases:

>100_bases
TATAAGTCTCAGTAATTTTAGAAAGTTTTTTTGCATAAATAAAGCTTTCTTTAATTTTTTATGATATAATTACAACAACT
TAAAAATAAAAGTGTGTTTT

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MVETYKSTSNPMMNRPVVKAELVEWMRSSQTQVTGELAEVLNFAKENNIPVIPHETVLYFQMLLSLLKPKRILEIGTAIG
FSALVMAQEVPEAEIVTIDRNPEMIELAKKNLTKYDHRNQIQLKEGDAADVLQELKGPFDLVFMDSAKSKYVEFLPKSLE
LLSENGLILMDDVFQAGEILLPIMEVKRNQRALERGLRKLFDEVFDNPKYMTSVLPLGDGLLMIKKHKNC

Sequences:

>Translated_230_residues
MVETYKSTSNPMMNRPVVKAELVEWMRSSQTQVTGELAEVLNFAKENNIPVIPHETVLYFQMLLSLLKPKRILEIGTAIG
FSALVMAQEVPEAEIVTIDRNPEMIELAKKNLTKYDHRNQIQLKEGDAADVLQELKGPFDLVFMDSAKSKYVEFLPKSLE
LLSENGLILMDDVFQAGEILLPIMEVKRNQRALERGLRKLFDEVFDNPKYMTSVLPLGDGLLMIKKHKNC
>Mature_230_residues
MVETYKSTSNPMMNRPVVKAELVEWMRSSQTQVTGELAEVLNFAKENNIPVIPHETVLYFQMLLSLLKPKRILEIGTAIG
FSALVMAQEVPEAEIVTIDRNPEMIELAKKNLTKYDHRNQIQLKEGDAADVLQELKGPFDLVFMDSAKSKYVEFLPKSLE
LLSENGLILMDDVFQAGEILLPIMEVKRNQRALERGLRKLFDEVFDNPKYMTSVLPLGDGLLMIKKHKNC

Specific function: Methylates The Translation Termination Release Factor Rf1 On Gln-235 And Rf2 On Gln-252. [C]

COG id: COG4122

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI72001028, Length=219, Percent_Identity=27.8538812785388, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17565612, Length=235, Percent_Identity=25.531914893617, Blast_Score=70, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI25148771, Length=174, Percent_Identity=27.0114942528736, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002935 [H]

Pfam domain/function: PF01596 Methyltransf_3 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 26195; Mature: 26195

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVETYKSTSNPMMNRPVVKAELVEWMRSSQTQVTGELAEVLNFAKENNIPVIPHETVLYF
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
QMLLSLLKPKRILEIGTAIGFSALVMAQEVPEAEIVTIDRNPEMIELAKKNLTKYDHRNQ
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCE
IQLKEGDAADVLQELKGPFDLVFMDSAKSKYVEFLPKSLELLSENGLILMDDVFQAGEIL
EEECCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHCHHHH
LPIMEVKRNQRALERGLRKLFDEVFDNPKYMTSVLPLGDGLLMIKKHKNC
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCC
>Mature Secondary Structure
MVETYKSTSNPMMNRPVVKAELVEWMRSSQTQVTGELAEVLNFAKENNIPVIPHETVLYF
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
QMLLSLLKPKRILEIGTAIGFSALVMAQEVPEAEIVTIDRNPEMIELAKKNLTKYDHRNQ
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCE
IQLKEGDAADVLQELKGPFDLVFMDSAKSKYVEFLPKSLELLSENGLILMDDVFQAGEIL
EEECCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHCHHHH
LPIMEVKRNQRALERGLRKLFDEVFDNPKYMTSVLPLGDGLLMIKKHKNC
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]