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The map label for this gene is aldR [H]

Identifier: 125624098

GI number: 125624098

Start: 1244240

End: 1244620

Strand: Reverse

Name: aldR [H]

Synonym: llmg_1274

Alternate gene names: 125624098

Gene position: 1244620-1244240 (Counterclockwise)

Preceding gene: 125624099

Following gene: 125624097

Centisome position: 49.2

GC content: 37.53

Gene sequence:

>381_bases
ATGAACATTATTGCAACACCCAATGCTCCCGCAGCGATTGGCCCTTACGTTCAAGGGAAAATAGTAAATGGCTTACTTTA
TGCCTCTGGACAAATTCCTTTGAATCCTCTTGATGGAGAAATCGTCGGTGATACAATCGAACTTCAAACTGAACAAGTGA
TGAAAAACATTGCCGCAATTTTGAAAGAGGCTCATTCAGATTTTGATTCCGTTATTAAAACAACTTGTTTTTTAAAGAAC
ATCGAAGATTTTTCCAAGTTTAACGCGATATATTCAAAATTCTTTGATAAAAGCTTTCCAGCTCGCTCCGCTGTAGGAGT
TGCTGGATTGCCCAAAGAAGTTCTCATTGAAATCGAATTTATTGCTGAGATTAAGTCCTAA

Upstream 100 bases:

>100_bases
ATTTTTATTTGCCGACCTTGACATTGAGGCTTTGAAAAAAGATATTGATGTAGCTGAATGATAATTGCTTAAATTTCTTT
AGCTACAAAGGAGAAATTTA

Downstream 100 bases:

>100_bases
CGTAATAGCATATTAACTATAAAAATTACTGACAAAAAAGCTGTCAGTAATTTTTTTTAGTTACAATTAAATATTTTTAT
CGTATAGAAAGATATAAGCA

Product: putative regulator AldR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MNIIATPNAPAAIGPYVQGKIVNGLLYASGQIPLNPLDGEIVGDTIELQTEQVMKNIAAILKEAHSDFDSVIKTTCFLKN
IEDFSKFNAIYSKFFDKSFPARSAVGVAGLPKEVLIEIEFIAEIKS

Sequences:

>Translated_126_residues
MNIIATPNAPAAIGPYVQGKIVNGLLYASGQIPLNPLDGEIVGDTIELQTEQVMKNIAAILKEAHSDFDSVIKTTCFLKN
IEDFSKFNAIYSKFFDKSFPARSAVGVAGLPKEVLIEIEFIAEIKS
>Mature_126_residues
MNIIATPNAPAAIGPYVQGKIVNGLLYASGQIPLNPLDGEIVGDTIELQTEQVMKNIAAILKEAHSDFDSVIKTTCFLKN
IEDFSKFNAIYSKFFDKSFPARSAVGVAGLPKEVLIEIEFIAEIKS

Specific function: Implicated in the regulation of isoleucine biosynthesis [H]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=121, Percent_Identity=45.4545454545455, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI87082396, Length=122, Percent_Identity=50, Blast_Score=114, Evalue=2e-27,
Organism=Escherichia coli, GI87082213, Length=124, Percent_Identity=43.5483870967742, Blast_Score=101, Evalue=1e-23,
Organism=Escherichia coli, GI1787245, Length=123, Percent_Identity=25.2032520325203, Blast_Score=60, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71982068, Length=121, Percent_Identity=43.801652892562, Blast_Score=109, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI25148896, Length=121, Percent_Identity=43.801652892562, Blast_Score=109, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71982075, Length=121, Percent_Identity=43.801652892562, Blast_Score=109, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6322138, Length=119, Percent_Identity=42.0168067226891, Blast_Score=99, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6320899, Length=101, Percent_Identity=44.5544554455446, Blast_Score=91, Evalue=7e-20,
Organism=Drosophila melanogaster, GI19921376, Length=120, Percent_Identity=40, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13674; Mature: 13674

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIATPNAPAAIGPYVQGKIVNGLLYASGQIPLNPLDGEIVGDTIELQTEQVMKNIAAI
CCEECCCCCCCCCCCCHHHHHHHHEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHHH
LKEAHSDFDSVIKTTCFLKNIEDFSKFNAIYSKFFDKSFPARSAVGVAGLPKEVLIEIEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
IAEIKS
HHCCCC
>Mature Secondary Structure
MNIIATPNAPAAIGPYVQGKIVNGLLYASGQIPLNPLDGEIVGDTIELQTEQVMKNIAAI
CCEECCCCCCCCCCCCHHHHHHHHEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHHH
LKEAHSDFDSVIKTTCFLKNIEDFSKFNAIYSKFFDKSFPARSAVGVAGLPKEVLIEIEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
IAEIKS
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335274; 11337471 [H]