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The map label for this gene is smf [H]

Identifier: 125624097

GI number: 125624097

Start: 1243244

End: 1244092

Strand: Reverse

Name: smf [H]

Synonym: llmg_1273

Alternate gene names: 125624097

Gene position: 1244092-1243244 (Counterclockwise)

Preceding gene: 125624098

Following gene: 125624096

Centisome position: 49.18

GC content: 34.86

Gene sequence:

>849_bases
ATGATTACAAATTTTGATTTGTTTCGTTGGAAAAAAGCAGGAATGATCAATCTTGGTGTAAATAAGCTCTTAAAATTTTT
CCACAAATATGATAGAAAAATAAGCTTACGACAAATGGGACAAGTGGCTCAAGTCAAATCAATCCCTAACTTTATCGAAC
AATATAAAAATCAGGACGTAAAGAAACTCAGGATAGACTATAAAAAATTTTCCTCCTTTTCCATTCTTGATGACCTTTAT
CCCGAGCGTCTAAGAGAAATCTATAACCCACCCGTCTTAATTTTTTATCAGGGAAATATTGATTTATTAAAAAACCCTAA
ACTTGCCTTTGTTGGAAGCCGCCTAGCAGGTCAATCAGGGATAAAAGCTGTCCAAAAAATTGTGACAGAATTGAATCAAT
CCTTTACAATAGTAAGCGGACTTGCCAAAGGGATTGACACAGCCAGCCATCTGTCAGCAATTAAAACTAAAACACCAACA
ATTGCTGTTATTGGTACAGGATTGGATATTTTCTATCCACTAGAAAATCGTAAAATACAGGAATATCTAGCAAAAAATCA
ATTAGTTTTAAGTGAATATTCATTAGGCGAAAAACCACTTAAATACCACTTCCCAGAGCGCAATCGAATTATTGCTGGTC
TTTCACGGGGAGTTGTTGTCGTGGAAGCAAAATTAAGAAGTGGAAGTTTAATTACCTGTGAAAGGGCACTGGAAGAAGGA
AGAGATATCTTTGCCATCCCTGGAAATATTGCAGATGGAACATCTGATGGCTGTAATCATCTTATTCAACAAGGAGCAAA
ACTTGTTTATCAAGCTCAAGATATTTTAGAAGAATATTTGTACAATTAA

Upstream 100 bases:

>100_bases
TAATTTTTTTTAGTTACAATTAAATATTTTTATCGTATAGAAAGATATAAGCAAATTTAAAAGTGACTGACTCATCCTGT
CAGTAATATTGGAGGTAGAT

Downstream 100 bases:

>100_bases
AAAATAGCTATAAGCCCTTAAATATAAAGCTCTTAGCGGTGTTTTATTATCTCAATTAATAACAAGTTTTACTATAAGAA
AACTAAATAGCTTGACATAT

Product: Smf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MITNFDLFRWKKAGMINLGVNKLLKFFHKYDRKISLRQMGQVAQVKSIPNFIEQYKNQDVKKLRIDYKKFSSFSILDDLY
PERLREIYNPPVLIFYQGNIDLLKNPKLAFVGSRLAGQSGIKAVQKIVTELNQSFTIVSGLAKGIDTASHLSAIKTKTPT
IAVIGTGLDIFYPLENRKIQEYLAKNQLVLSEYSLGEKPLKYHFPERNRIIAGLSRGVVVVEAKLRSGSLITCERALEEG
RDIFAIPGNIADGTSDGCNHLIQQGAKLVYQAQDILEEYLYN

Sequences:

>Translated_282_residues
MITNFDLFRWKKAGMINLGVNKLLKFFHKYDRKISLRQMGQVAQVKSIPNFIEQYKNQDVKKLRIDYKKFSSFSILDDLY
PERLREIYNPPVLIFYQGNIDLLKNPKLAFVGSRLAGQSGIKAVQKIVTELNQSFTIVSGLAKGIDTASHLSAIKTKTPT
IAVIGTGLDIFYPLENRKIQEYLAKNQLVLSEYSLGEKPLKYHFPERNRIIAGLSRGVVVVEAKLRSGSLITCERALEEG
RDIFAIPGNIADGTSDGCNHLIQQGAKLVYQAQDILEEYLYN
>Mature_282_residues
MITNFDLFRWKKAGMINLGVNKLLKFFHKYDRKISLRQMGQVAQVKSIPNFIEQYKNQDVKKLRIDYKKFSSFSILDDLY
PERLREIYNPPVLIFYQGNIDLLKNPKLAFVGSRLAGQSGIKAVQKIVTELNQSFTIVSGLAKGIDTASHLSAIKTKTPT
IAVIGTGLDIFYPLENRKIQEYLAKNQLVLSEYSLGEKPLKYHFPERNRIIAGLSRGVVVVEAKLRSGSLITCERALEEG
RDIFAIPGNIADGTSDGCNHLIQQGAKLVYQAQDILEEYLYN

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=203, Percent_Identity=41.871921182266, Blast_Score=155, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 31920; Mature: 31920

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITNFDLFRWKKAGMINLGVNKLLKFFHKYDRKISLRQMGQVAQVKSIPNFIEQYKNQDV
CCCCCCHHHHHCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
KKLRIDYKKFSSFSILDDLYPERLREIYNPPVLIFYQGNIDLLKNPKLAFVGSRLAGQSG
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCEEEECCHHCCHHH
IKAVQKIVTELNQSFTIVSGLAKGIDTASHLSAIKTKTPTIAVIGTGLDIFYPLENRKIQ
HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCCHHH
EYLAKNQLVLSEYSLGEKPLKYHFPERNRIIAGLSRGVVVVEAKLRSGSLITCERALEEG
HHHHHCCEEEEHHCCCCCCCEECCCCCCCCCEECCCCEEEEEEECCCCCEEEHHHHHHCC
RDIFAIPGNIADGTSDGCNHLIQQGAKLVYQAQDILEEYLYN
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITNFDLFRWKKAGMINLGVNKLLKFFHKYDRKISLRQMGQVAQVKSIPNFIEQYKNQDV
CCCCCCHHHHHCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
KKLRIDYKKFSSFSILDDLYPERLREIYNPPVLIFYQGNIDLLKNPKLAFVGSRLAGQSG
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCEEEECCHHCCHHH
IKAVQKIVTELNQSFTIVSGLAKGIDTASHLSAIKTKTPTIAVIGTGLDIFYPLENRKIQ
HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCCHHH
EYLAKNQLVLSEYSLGEKPLKYHFPERNRIIAGLSRGVVVVEAKLRSGSLITCERALEEG
HHHHHCCEEEEHHCCCCCCCEECCCCCCCCCEECCCCEEEEEEECCCCCEEEHHHHHHCC
RDIFAIPGNIADGTSDGCNHLIQQGAKLVYQAQDILEEYLYN
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]