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The map label for this gene is xylA [H]

Identifier: 125623996

GI number: 125623996

Start: 1131976

End: 1132872

Strand: Direct

Name: xylA [H]

Synonym: llmg_1166

Alternate gene names: 125623996

Gene position: 1131976-1132872 (Clockwise)

Preceding gene: 125623995

Following gene: 125623997

Centisome position: 44.75

GC content: 37.01

Gene sequence:

>897_bases
ATGAAAAACTTATTATTAAAAGTCGCTTCAAAAGAAGCCATTGACAAGAAAGTAGAGAAAGTCTTTGAAATTCTCTTTGG
ACAAGATTCTCCTGAACGTCTCTATTTTGAAGAAGAAGACAAGGCTTATATTGTCGATACAGGCAATGATGATGTCAGAA
CAGAAGGAATGTCTTATGGAATGATGATTGCTTTGCAATTGGACAAACCAGAAATCTTTTCTCGTTTATGGGCGTGGGTA
AAAACCTATATGACAGTCCCTAAAGGGCATGAAAATGAAGGCTATTTTATCTGGTCTTGTGGACTAGATGGTCATCCCAA
TAGTGACGGCCCAGCACCAGATGGTGAAGAATATTTTGCAGCAGCACTATTGCTGGCTGAAAAGAGATGGAAAATCAAAG
AATACGGGGATGAAGCAAGAGCTTTACTTCATGCCATGGTTCATAAAGGGGAAAATCAGGATGGATATCCCATGTTTGAA
CCAAAAAACACCTATATTAAGTTTGTTGCTAATCGACAGATGACTGATCCATCATATCATTTACTACATTTTTATCAGCT
TTATGCCAAATATGGAAATCCAGAAGATTCAGCTTTTTTTCTGAAGGCTGAGGAAGAAGCACGAAAGTATTGGCTCAAAT
CAGCAAATGCTAAAACTGGACTTACGCCAGAATATGCGGATTATGATGGAAAACCCTATGATATTGATGGTCACTGGACT
TTCTTTAGCGATGCTTATCGTACGGCTGCTAATATTGGGTTGGACTGGATTTGGGAGCACAAAGATATTGGACAAAGTCA
GATTGCTTTAAATATTCAAAAATTCTTTGAAATCTATCTTAATAGTGATAAAGAAATTCCTGTTTTTAAAATAAATGGCC
AGCCTTTAAGGAAATAA

Upstream 100 bases:

>100_bases
TCTGGTCTTTCGATTACGATTGCACCCATTATTATTGTTTATCTGATTCTCTCTCGTTTTATTGTCGGTGGAGGAACAGC
AGGAGGCGTCAAAGGTTAAG

Downstream 100 bases:

>100_bases
GAACAGACCGCGGAAGGATTTCCACCTCTAAAAGTCCATCATCCGATTGGTCTATGGTCAACTTTAGCTCAAGCTTCACT
TGTCACCAATGATTTTGACT

Product: putative endoglucanase

Products: NA

Alternate protein names: RexA [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKNLLLKVASKEAIDKKVEKVFEILFGQDSPERLYFEEEDKAYIVDTGNDDVRTEGMSYGMMIALQLDKPEIFSRLWAWV
KTYMTVPKGHENEGYFIWSCGLDGHPNSDGPAPDGEEYFAAALLLAEKRWKIKEYGDEARALLHAMVHKGENQDGYPMFE
PKNTYIKFVANRQMTDPSYHLLHFYQLYAKYGNPEDSAFFLKAEEEARKYWLKSANAKTGLTPEYADYDGKPYDIDGHWT
FFSDAYRTAANIGLDWIWEHKDIGQSQIALNIQKFFEIYLNSDKEIPVFKINGQPLRK

Sequences:

>Translated_298_residues
MKNLLLKVASKEAIDKKVEKVFEILFGQDSPERLYFEEEDKAYIVDTGNDDVRTEGMSYGMMIALQLDKPEIFSRLWAWV
KTYMTVPKGHENEGYFIWSCGLDGHPNSDGPAPDGEEYFAAALLLAEKRWKIKEYGDEARALLHAMVHKGENQDGYPMFE
PKNTYIKFVANRQMTDPSYHLLHFYQLYAKYGNPEDSAFFLKAEEEARKYWLKSANAKTGLTPEYADYDGKPYDIDGHWT
FFSDAYRTAANIGLDWIWEHKDIGQSQIALNIQKFFEIYLNSDKEIPVFKINGQPLRK
>Mature_298_residues
MKNLLLKVASKEAIDKKVEKVFEILFGQDSPERLYFEEEDKAYIVDTGNDDVRTEGMSYGMMIALQLDKPEIFSRLWAWV
KTYMTVPKGHENEGYFIWSCGLDGHPNSDGPAPDGEEYFAAALLLAEKRWKIKEYGDEARALLHAMVHKGENQDGYPMFE
PKNTYIKFVANRQMTDPSYHLLHFYQLYAKYGNPEDSAFFLKAEEEARKYWLKSANAKTGLTPEYADYDGKPYDIDGHWT
FFSDAYRTAANIGLDWIWEHKDIGQSQIALNIQKFFEIYLNSDKEIPVFKINGQPLRK

Specific function: Hydrolyzes xylooligosaccharides with a degree of polymerization of greater than or equal to 3, releasing xylose from the reducing end. Has low activity on birchwood xylan, oat spelt xylan and arabinoxylan [H]

COG id: COG3405

COG function: function code G; Endoglucanase Y

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 8 (cellulase D) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR002037 [H]

Pfam domain/function: PF01270 Glyco_hydro_8 [H]

EC number: =3.2.1.156 [H]

Molecular weight: Translated: 34569; Mature: 34569

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLLLKVASKEAIDKKVEKVFEILFGQDSPERLYFEEEDKAYIVDTGNDDVRTEGMSYG
CCCHHEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCE
MMIALQLDKPEIFSRLWAWVKTYMTVPKGHENEGYFIWSCGLDGHPNSDGPAPDGEEYFA
EEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
AALLLAEKRWKIKEYGDEARALLHAMVHKGENQDGYPMFEPKNTYIKFVANRQMTDPSYH
HHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHH
LLHFYQLYAKYGNPEDSAFFLKAEEEARKYWLKSANAKTGLTPEYADYDGKPYDIDGHWT
HHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEE
FFSDAYRTAANIGLDWIWEHKDIGQSQIALNIQKFFEIYLNSDKEIPVFKINGQPLRK
EHHHHHHHHHHCCCEEEECCCCCCCHHEEHHHHHHHHHHCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MKNLLLKVASKEAIDKKVEKVFEILFGQDSPERLYFEEEDKAYIVDTGNDDVRTEGMSYG
CCCHHEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCE
MMIALQLDKPEIFSRLWAWVKTYMTVPKGHENEGYFIWSCGLDGHPNSDGPAPDGEEYFA
EEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
AALLLAEKRWKIKEYGDEARALLHAMVHKGENQDGYPMFEPKNTYIKFVANRQMTDPSYH
HHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHH
LLHFYQLYAKYGNPEDSAFFLKAEEEARKYWLKSANAKTGLTPEYADYDGKPYDIDGHWT
HHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEE
FFSDAYRTAANIGLDWIWEHKDIGQSQIALNIQKFFEIYLNSDKEIPVFKINGQPLRK
EHHHHHHHHHHCCCEEEECCCCCCCHHEEHHHHHHHHHHCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA