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The map label for this gene is yfmR [H]

Identifier: 125623788

GI number: 125623788

Start: 915370

End: 917241

Strand: Direct

Name: yfmR [H]

Synonym: llmg_0948

Alternate gene names: 125623788

Gene position: 915370-917241 (Clockwise)

Preceding gene: 125623787

Following gene: 125623789

Centisome position: 36.19

GC content: 34.94

Gene sequence:

>1872_bases
ATGGCAGACTTCATCGCACAAAATTTAAGTAAATCAGTTGGAGAAAAAACGGTTTTCAATAAAATCAATTTCATCATTCA
TGATCTTGATCGAATTGGACTTTTAGGAGTAAATGGAACAGGTAAAACAACACTCTTAAATGTTATTTCAGGAATTTCTG
GTTTTGATGGAGATAAATCGCCTTTTGACCATCCACAAAATTATAAAATTACTTATTTAACTCAAGAACCAGATTTTAAT
CCCAAAGCAAGTATTTTAGATAGTGTTTTAGATGATTCACTTCCACAAATGAGGGCAATTAAAAACTATGAAGCGGCGCT
TTTGGATTTTGAAAATTTGTCTAAATTAGAGCGTGCTCAGTCAGAAATGGATGCCTTGAATGCATGGCAAGTAGAAGCAG
ATGTCAAAACAATTTTAACTAAACTTCAACTTCCAGAAGCTACAACAATCATTGAAAGTCTTTCTGGTGGACAAAAAAGA
CGTGTTCAATTGGCTCAAGCTTTAGTCAATGATTCAGATTTGTTATTACTTGATGAACCAACCAACCACCTTGATGTTGA
GACCATTGCTTGGTTACAAAATTATCTTAAAAATTCTCGAAGAACAGTTCTTTTTGTTACCCATGACCGTTATTTTTTGG
ATAATGTTGCATCACGAATTTTTGAGCTTGAAGATGCCGGATTAAAAGAGTATCAAGGAAATTATCAAGATTATTTAGCG
AAAAAAGCAGAAGATGAAGAACGTGAAGCCGCAGCGAGTCATAAAGCCAAACAACTTTACCAGTCCGAATTAACTTGGAT
TCGTAAATCACCACAAGCTCGGGCAACCAAACAACAGGCACGTATTGACCGCTTTGAAGACCTCAAAGATTCAATGAAAA
CTTCAAAAAATCAAGAGGATTTGGAATTAAATATTGCTTCAAGTCGCTTAGGTAAAAAAGTGATTAATTTTAAGAATGCA
GGATTTTCTTACCCAGACCGACAAATTTTCAGCAATTTTGATTTAATTGTTCAACCTCATTCGCGCTTAGGGATTGTTGG
GGATAATGGCGTTGGAAAATCAACACTCCTCAATGTCATTGCTGGAGAATTAGAATTAACTGATGGGCTTTTAGAAATTG
GGGAAACCGTCAAAATTGGTTATTTCAGTCAAGAAATTCGCGGACTTGATGAAAATAAACGCATGATAAATTTCCTTGAA
GAAGTGGCTTCGGCTGCTCATAATAATAGTGGCGAGAATATTTCAATTGTTAATCTATTAGAGCAATTTCTCTTTCCAAG
AAGTAGCCACGGAACACTCATTTCTAAACTTTCTGGTGGTGAGAAAAAACGACTCTATTTACTAAAGATTTTACTATTAC
AACCTAATGTGCTTTTACTTGACGAACCAACCAATGACTTGGATATTGCAACATTAACCGTACTTGAAAATTTCCTAGGG
TCTTTCCCTGGTGCTGTTTTGACCGTTTCACATGACCGTTATTTCCAAGACAAAGTAAGTAATGAATTACTTGCCTTTGA
AAATGGAGAAATCAACCATTATTTTGGTGCTTACAGTGACTATTTAGCGGTCAAAATGGAAGAAAAAATTGCTGACAAAG
CTGTCAGCAAAACTGAAAGTCCCGTAATTGCTGACAAAAGAGAAAATACGGACAAAGCCAAACTGACTTATATGGAAAAG
AAAGAATGGGAAAACATTGAAAGTCAAATTGCTGAAATTGAAGAACGAATTTCTGAGATAGACACAGAAATGAATGAAAA
TGGTTCTAATACAGAACTCTTACTTGACTTACAAAAAGAATTAGACAATAAAACAAAAGAGCTTGAAGAAAAATATGAAC
GTTGGGAATATCTATCAGAAAGGGCCGACTAA

Upstream 100 bases:

>100_bases
AAAGAATCGCTCACTTTGCTAGTAAAAATGATACCTGTCGTTACTGACAGGCTTTTTTATGATATAATCAAAAGTAATAT
AAGAGAAATTAGGGCAAAAA

Downstream 100 bases:

>100_bases
AAGATTATGACGACACAAGAACTTATTGAAACCTTACAAAAATTTCCACCAGAAGCAACTGTAAAAATCATTCAAAATGA
TATCAGTGGAGACAGATTTT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 623; Mature: 622

Protein sequence:

>623_residues
MADFIAQNLSKSVGEKTVFNKINFIIHDLDRIGLLGVNGTGKTTLLNVISGISGFDGDKSPFDHPQNYKITYLTQEPDFN
PKASILDSVLDDSLPQMRAIKNYEAALLDFENLSKLERAQSEMDALNAWQVEADVKTILTKLQLPEATTIIESLSGGQKR
RVQLAQALVNDSDLLLLDEPTNHLDVETIAWLQNYLKNSRRTVLFVTHDRYFLDNVASRIFELEDAGLKEYQGNYQDYLA
KKAEDEEREAAASHKAKQLYQSELTWIRKSPQARATKQQARIDRFEDLKDSMKTSKNQEDLELNIASSRLGKKVINFKNA
GFSYPDRQIFSNFDLIVQPHSRLGIVGDNGVGKSTLLNVIAGELELTDGLLEIGETVKIGYFSQEIRGLDENKRMINFLE
EVASAAHNNSGENISIVNLLEQFLFPRSSHGTLISKLSGGEKKRLYLLKILLLQPNVLLLDEPTNDLDIATLTVLENFLG
SFPGAVLTVSHDRYFQDKVSNELLAFENGEINHYFGAYSDYLAVKMEEKIADKAVSKTESPVIADKRENTDKAKLTYMEK
KEWENIESQIAEIEERISEIDTEMNENGSNTELLLDLQKELDNKTKELEEKYERWEYLSERAD

Sequences:

>Translated_623_residues
MADFIAQNLSKSVGEKTVFNKINFIIHDLDRIGLLGVNGTGKTTLLNVISGISGFDGDKSPFDHPQNYKITYLTQEPDFN
PKASILDSVLDDSLPQMRAIKNYEAALLDFENLSKLERAQSEMDALNAWQVEADVKTILTKLQLPEATTIIESLSGGQKR
RVQLAQALVNDSDLLLLDEPTNHLDVETIAWLQNYLKNSRRTVLFVTHDRYFLDNVASRIFELEDAGLKEYQGNYQDYLA
KKAEDEEREAAASHKAKQLYQSELTWIRKSPQARATKQQARIDRFEDLKDSMKTSKNQEDLELNIASSRLGKKVINFKNA
GFSYPDRQIFSNFDLIVQPHSRLGIVGDNGVGKSTLLNVIAGELELTDGLLEIGETVKIGYFSQEIRGLDENKRMINFLE
EVASAAHNNSGENISIVNLLEQFLFPRSSHGTLISKLSGGEKKRLYLLKILLLQPNVLLLDEPTNDLDIATLTVLENFLG
SFPGAVLTVSHDRYFQDKVSNELLAFENGEINHYFGAYSDYLAVKMEEKIADKAVSKTESPVIADKRENTDKAKLTYMEK
KEWENIESQIAEIEERISEIDTEMNENGSNTELLLDLQKELDNKTKELEEKYERWEYLSERAD
>Mature_622_residues
ADFIAQNLSKSVGEKTVFNKINFIIHDLDRIGLLGVNGTGKTTLLNVISGISGFDGDKSPFDHPQNYKITYLTQEPDFNP
KASILDSVLDDSLPQMRAIKNYEAALLDFENLSKLERAQSEMDALNAWQVEADVKTILTKLQLPEATTIIESLSGGQKRR
VQLAQALVNDSDLLLLDEPTNHLDVETIAWLQNYLKNSRRTVLFVTHDRYFLDNVASRIFELEDAGLKEYQGNYQDYLAK
KAEDEEREAAASHKAKQLYQSELTWIRKSPQARATKQQARIDRFEDLKDSMKTSKNQEDLELNIASSRLGKKVINFKNAG
FSYPDRQIFSNFDLIVQPHSRLGIVGDNGVGKSTLLNVIAGELELTDGLLEIGETVKIGYFSQEIRGLDENKRMINFLEE
VASAAHNNSGENISIVNLLEQFLFPRSSHGTLISKLSGGEKKRLYLLKILLLQPNVLLLDEPTNDLDIATLTVLENFLGS
FPGAVLTVSHDRYFQDKVSNELLAFENGEINHYFGAYSDYLAVKMEEKIADKAVSKTESPVIADKRENTDKAKLTYMEKK
EWENIESQIAEIEERISEIDTEMNENGSNTELLLDLQKELDNKTKELEEKYERWEYLSERAD

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=540, Percent_Identity=30.3703703703704, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI10947135, Length=557, Percent_Identity=29.802513464991, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI69354671, Length=557, Percent_Identity=29.802513464991, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI27881506, Length=512, Percent_Identity=29.8828125, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI10947137, Length=512, Percent_Identity=29.8828125, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI153792144, Length=220, Percent_Identity=30.4545454545455, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI2367384, Length=537, Percent_Identity=35.9404096834264, Blast_Score=312, Evalue=4e-86,
Organism=Escherichia coli, GI1787182, Length=631, Percent_Identity=32.0126782884311, Blast_Score=301, Evalue=8e-83,
Organism=Escherichia coli, GI1789751, Length=639, Percent_Identity=29.5774647887324, Blast_Score=249, Evalue=3e-67,
Organism=Escherichia coli, GI1787041, Length=546, Percent_Identity=28.9377289377289, Blast_Score=218, Evalue=7e-58,
Organism=Escherichia coli, GI1788165, Length=213, Percent_Identity=28.6384976525822, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1787370, Length=228, Percent_Identity=29.3859649122807, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1787712, Length=211, Percent_Identity=29.3838862559242, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789593, Length=223, Percent_Identity=26.457399103139, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI48994883, Length=239, Percent_Identity=24.6861924686192, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786703, Length=215, Percent_Identity=28.3720930232558, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1788506, Length=263, Percent_Identity=23.9543726235741, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1786563, Length=206, Percent_Identity=28.6407766990291, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1787029, Length=243, Percent_Identity=27.5720164609054, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1786698, Length=194, Percent_Identity=29.8969072164948, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787164, Length=193, Percent_Identity=25.9067357512953, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=544, Percent_Identity=28.4926470588235, Blast_Score=204, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI17553372, Length=541, Percent_Identity=29.3900184842884, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17555318, Length=535, Percent_Identity=26.7289719626168, Blast_Score=165, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17541710, Length=188, Percent_Identity=32.9787234042553, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=516, Percent_Identity=30.6201550387597, Blast_Score=202, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6321121, Length=527, Percent_Identity=28.842504743833, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6323278, Length=379, Percent_Identity=27.7044854881267, Blast_Score=144, Evalue=6e-35,
Organism=Saccharomyces cerevisiae, GI6324314, Length=390, Percent_Identity=27.9487179487179, Blast_Score=130, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6325030, Length=401, Percent_Identity=26.4339152119701, Blast_Score=119, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6320266, Length=401, Percent_Identity=25.9351620947631, Blast_Score=94, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24666836, Length=554, Percent_Identity=31.2274368231047, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24641342, Length=543, Percent_Identity=29.8342541436464, Blast_Score=210, Evalue=3e-54,
Organism=Drosophila melanogaster, GI24642252, Length=534, Percent_Identity=28.4644194756554, Blast_Score=178, Evalue=1e-44,
Organism=Drosophila melanogaster, GI18859989, Length=534, Percent_Identity=28.4644194756554, Blast_Score=178, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24582014, Length=197, Percent_Identity=29.9492385786802, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24582012, Length=197, Percent_Identity=29.9492385786802, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17136662, Length=256, Percent_Identity=25.390625, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 70611; Mature: 70480

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFIAQNLSKSVGEKTVFNKINFIIHDLDRIGLLGVNGTGKTTLLNVISGISGFDGDKS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCCCCCCC
PFDHPQNYKITYLTQEPDFNPKASILDSVLDDSLPQMRAIKNYEAALLDFENLSKLERAQ
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHH
SEMDALNAWQVEADVKTILTKLQLPEATTIIESLSGGQKRRVQLAQALVNDSDLLLLDEP
HHHHHHHHHEEHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECC
TNHLDVETIAWLQNYLKNSRRTVLFVTHDRYFLDNVASRIFELEDAGLKEYQGNYQDYLA
CCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHH
KKAEDEEREAAASHKAKQLYQSELTWIRKSPQARATKQQARIDRFEDLKDSMKTSKNQED
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LELNIASSRLGKKVINFKNAGFSYPDRQIFSNFDLIVQPHSRLGIVGDNGVGKSTLLNVI
EEEEEHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEECCCCEEEECCCCCCHHHHHHHH
AGELELTDGLLEIGETVKIGYFSQEIRGLDENKRMINFLEEVASAAHNNSGENISIVNLL
HHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
EQFLFPRSSHGTLISKLSGGEKKRLYLLKILLLQPNVLLLDEPTNDLDIATLTVLENFLG
HHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHH
SFPGAVLTVSHDRYFQDKVSNELLAFENGEINHYFGAYSDYLAVKMEEKIADKAVSKTES
CCCCCEEEEECCHHHHHHHCCCEEEEECCCCCEECCCHHHHHHEEHHHHHHHHHHHCCCC
PVIADKRENTDKAKLTYMEKKEWENIESQIAEIEERISEIDTEMNENGSNTELLLDLQKE
CCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHH
LDNKTKELEEKYERWEYLSERAD
HCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADFIAQNLSKSVGEKTVFNKINFIIHDLDRIGLLGVNGTGKTTLLNVISGISGFDGDKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCCCCCCC
PFDHPQNYKITYLTQEPDFNPKASILDSVLDDSLPQMRAIKNYEAALLDFENLSKLERAQ
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHH
SEMDALNAWQVEADVKTILTKLQLPEATTIIESLSGGQKRRVQLAQALVNDSDLLLLDEP
HHHHHHHHHEEHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECC
TNHLDVETIAWLQNYLKNSRRTVLFVTHDRYFLDNVASRIFELEDAGLKEYQGNYQDYLA
CCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHH
KKAEDEEREAAASHKAKQLYQSELTWIRKSPQARATKQQARIDRFEDLKDSMKTSKNQED
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LELNIASSRLGKKVINFKNAGFSYPDRQIFSNFDLIVQPHSRLGIVGDNGVGKSTLLNVI
EEEEEHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEECCCCEEEECCCCCCHHHHHHHH
AGELELTDGLLEIGETVKIGYFSQEIRGLDENKRMINFLEEVASAAHNNSGENISIVNLL
HHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
EQFLFPRSSHGTLISKLSGGEKKRLYLLKILLLQPNVLLLDEPTNDLDIATLTVLENFLG
HHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHH
SFPGAVLTVSHDRYFQDKVSNELLAFENGEINHYFGAYSDYLAVKMEEKIADKAVSKTES
CCCCCEEEEECCHHHHHHHCCCEEEEECCCCCEECCCHHHHHHEEHHHHHHHHHHHCCCC
PVIADKRENTDKAKLTYMEKKEWENIESQIAEIEERISEIDTEMNENGSNTELLLDLQKE
CCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHH
LDNKTKELEEKYERWEYLSERAD
HCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]