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The map label for this gene is yqkD [H]

Identifier: 125623768

GI number: 125623768

Start: 896558

End: 897529

Strand: Direct

Name: yqkD [H]

Synonym: llmg_0927

Alternate gene names: 125623768

Gene position: 896558-897529 (Clockwise)

Preceding gene: 125623766

Following gene: 125623769

Centisome position: 35.44

GC content: 36.52

Gene sequence:

>972_bases
ATGAAAAAAAGGAAAAAGATGATTATATGGATTCTGGTAGTTTTATCCGTGATTTTGGTCGGAGGATATTTTGCAATCGG
AAATTATTTTTATGACATGGCTATTAATGCGCATACCAGCAAATCTTTTTTGACTGGGAATAATGATTCAAAAAAGCAAA
AAACACTCTCTAAAAAAGAAAAAGAGAGAAAAGAGCAAAATGAAGCCTTTATGGCTCAGGTTAAGCCAACAGCCTCTTAT
GTCACTTCGTCTGATAAGTTAAAATTGAAACTTTATGCGGCAGATTATATTCAAAAATCAAAGACAAATAAGGGGGCGAT
TGTTGTGCATGGTTATGGTGGTCAATCAAGTGATATGGCTAGTTGGACACGTCATTTTTATAATAAAGGATATAATGTTG
TTACTCCTGATTTAAGAGGCCATGGGAAAAGTCAGGGAGATTATATTGGTATGGGTTGGGATGACCGAAAAGACATGCTG
CTCTGGATTAACACAATCACTCAACGAGACCCTCAAGCAGAGATTGTTCTGCTAGGTGTTTCAATGGGTGGAGCTACTGT
CATGAATACCTCAGGAGAAAAACTTCCCTCTAATGTCAAAGCCATTGTGGAAGATTGTGGCTATACTTCAACCGGAGATG
TTTTTACTTATCAGCTAAAACAACTATTTGGCTTGCCTAAATTTCCTGTCCTTTATGCTGCGAATACTATGACAGAAATC
AGAGCGGGATATAATATCTTCAAGTCTTCTGCGATTAAACAAGTAGCAAAGAGTAAAACGCCAATGCTCTTTATTCATGG
GGATAAGGATACTTTTGTTCCTTTTAAAATGTTAGAACCTCTCTATAATGCGGCTAAGGTCGAAAAAGAAAAATTGGTTG
TTCACGGAGCAGGACATGGTGAATCAGAAAAAATAAATCCTGACTTATATTGGAGCCATGTTTGGAATTTTGTTGGAAAA
TATATGTCATAA

Upstream 100 bases:

>100_bases
AAATGACGTATTGTAAAATTAGTACTAAAGAATATAATAATTTGCAAAAAAAGAGGTTTTAATATTACAATAGTAAAATA
TAAATATAAAAGGGAATATT

Downstream 100 bases:

>100_bases
TTATAAAATCAGTCAATAAAATAGCAAAATAAAAAAGTTCTTTATTAAAGAGCTTTTTTATTTTAATTTTGATATTTTTG
AAGACAATTTTTAGTTGACA

Product: putative extracellular hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKKRKKMIIWILVVLSVILVGGYFAIGNYFYDMAINAHTSKSFLTGNNDSKKQKTLSKKEKERKEQNEAFMAQVKPTASY
VTSSDKLKLKLYAADYIQKSKTNKGAIVVHGYGGQSSDMASWTRHFYNKGYNVVTPDLRGHGKSQGDYIGMGWDDRKDML
LWINTITQRDPQAEIVLLGVSMGGATVMNTSGEKLPSNVKAIVEDCGYTSTGDVFTYQLKQLFGLPKFPVLYAANTMTEI
RAGYNIFKSSAIKQVAKSKTPMLFIHGDKDTFVPFKMLEPLYNAAKVEKEKLVVHGAGHGESEKINPDLYWSHVWNFVGK
YMS

Sequences:

>Translated_323_residues
MKKRKKMIIWILVVLSVILVGGYFAIGNYFYDMAINAHTSKSFLTGNNDSKKQKTLSKKEKERKEQNEAFMAQVKPTASY
VTSSDKLKLKLYAADYIQKSKTNKGAIVVHGYGGQSSDMASWTRHFYNKGYNVVTPDLRGHGKSQGDYIGMGWDDRKDML
LWINTITQRDPQAEIVLLGVSMGGATVMNTSGEKLPSNVKAIVEDCGYTSTGDVFTYQLKQLFGLPKFPVLYAANTMTEI
RAGYNIFKSSAIKQVAKSKTPMLFIHGDKDTFVPFKMLEPLYNAAKVEKEKLVVHGAGHGESEKINPDLYWSHVWNFVGK
YMS
>Mature_323_residues
MKKRKKMIIWILVVLSVILVGGYFAIGNYFYDMAINAHTSKSFLTGNNDSKKQKTLSKKEKERKEQNEAFMAQVKPTASY
VTSSDKLKLKLYAADYIQKSKTNKGAIVVHGYGGQSSDMASWTRHFYNKGYNVVTPDLRGHGKSQGDYIGMGWDDRKDML
LWINTITQRDPQAEIVLLGVSMGGATVMNTSGEKLPSNVKAIVEDCGYTSTGDVFTYQLKQLFGLPKFPVLYAANTMTEI
RAGYNIFKSSAIKQVAKSKTPMLFIHGDKDTFVPFKMLEPLYNAAKVEKEKLVVHGAGHGESEKINPDLYWSHVWNFVGK
YMS

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510965, Length=223, Percent_Identity=25.1121076233184, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 36266; Mature: 36266

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRKKMIIWILVVLSVILVGGYFAIGNYFYDMAINAHTSKSFLTGNNDSKKQKTLSKKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEECCCCHHHHHHHHHHH
KERKEQNEAFMAQVKPTASYVTSSDKLKLKLYAADYIQKSKTNKGAIVVHGYGGQSSDMA
HHHHHHHHHHEEEECCHHHHHCCCCCEEEEEEEHHHHHHCCCCCCEEEEECCCCCCCHHH
SWTRHFYNKGYNVVTPDLRGHGKSQGDYIGMGWDDRKDMLLWINTITQRDPQAEIVLLGV
HHHHHHHHCCCCEECCCCCCCCCCCCCEEECCCCCCCCEEEEEEHHHCCCCCCEEEEEEE
SMGGATVMNTSGEKLPSNVKAIVEDCGYTSTGDVFTYQLKQLFGLPKFPVLYAANTMTEI
CCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHH
RAGYNIFKSSAIKQVAKSKTPMLFIHGDKDTFVPFKMLEPLYNAAKVEKEKLVVHGAGHG
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCC
ESEKINPDLYWSHVWNFVGKYMS
CCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKRKKMIIWILVVLSVILVGGYFAIGNYFYDMAINAHTSKSFLTGNNDSKKQKTLSKKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEECCCCHHHHHHHHHHH
KERKEQNEAFMAQVKPTASYVTSSDKLKLKLYAADYIQKSKTNKGAIVVHGYGGQSSDMA
HHHHHHHHHHEEEECCHHHHHCCCCCEEEEEEEHHHHHHCCCCCCEEEEECCCCCCCHHH
SWTRHFYNKGYNVVTPDLRGHGKSQGDYIGMGWDDRKDMLLWINTITQRDPQAEIVLLGV
HHHHHHHHCCCCEECCCCCCCCCCCCCEEECCCCCCCCEEEEEEHHHCCCCCCEEEEEEE
SMGGATVMNTSGEKLPSNVKAIVEDCGYTSTGDVFTYQLKQLFGLPKFPVLYAANTMTEI
CCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHH
RAGYNIFKSSAIKQVAKSKTPMLFIHGDKDTFVPFKMLEPLYNAAKVEKEKLVVHGAGHG
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCC
ESEKINPDLYWSHVWNFVGKYMS
CCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]