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The map label for this gene is ykrA [H]

Identifier: 125623619

GI number: 125623619

Start: 753649

End: 754434

Strand: Reverse

Name: ykrA [H]

Synonym: llmg_0765

Alternate gene names: 125623619

Gene position: 754434-753649 (Counterclockwise)

Preceding gene: 125623626

Following gene: 125623615

Centisome position: 29.83

GC content: 38.8

Gene sequence:

>786_bases
ATGGAAAATATCAATGATTATAAGGCTTTGGCCTTCTTCGATTTAGACGGAACTTTGCTTAACAGTCAAAGTAAACTTGA
CCAAGAAGTCATTGAAGGAATTCACCGCATTCGTAAAAATGGTGTCTTGCCTTTTATTGCCACTGGTCGTGGTCACTTTG
AACTGGATGAAATTATGGCTACAACAGGAATTACTGGAGCTATTGCTATGAACGGTCAGTACATTGTTTTAGAAGGTGAA
ACAATCTATAAGGAAGAAATTCCAACGGCAAGTGTTGAAAAATTACTAGATGCCGCACAACCCCATTCAGAAGCCCTTTC
TTTTTATGATAGCCAAGGTTATTGGGTGAGCGAACTCACTGATTTAGCTAAAAGAGCCTATTCTTACACTCACATGCCAA
TGCCTCAAGTAGATGCTAGACGTTATCTTTCCCAAGAAGTCAACATGCTTTTGGTTTTAACGAATCAGCTCAGTCAGGTT
GAGTATTATAAAGAACAAGTGCCTGAACTCAACTTTTTCATGAATTCTCCTAGTTCAATTGATGTGACAAATAGCACAAC
TAATAAAGGCACGGGGATTAATCATGTCAAAGAAGTCTTGAATTTCACTGGCCAAACCTTTGCTTTTGGCGATGGGCGTA
ATGACCTTGATTTATTCAAAGCTGCTGACCACAAAACGGCAATGGGAAATGCAGTGCCAGAACTAAAAGAACTAGCAGAC
TTCATCTCTACTGAAAATACAAATCATGGAATCATCAATGCATTCAACCATTGGGGAATCTTATAA

Upstream 100 bases:

>100_bases
GCAAATACTAATGACAGTCTTGTCAGTATTTTGAATCATTTAATTAAAATGATGGATAATTCCACTTACAATTATATCAT
AAATTTGATACAATAATTTT

Downstream 100 bases:

>100_bases
TAAAAAAAGTTACTGACAAAATATCTGTCAGTAACTTTTTTATTTATTTTCGAGCACTTCTCGTCTTCGATAGACAAAAG
CTAGAATGAAACAAATGGCA

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MENINDYKALAFFDLDGTLLNSQSKLDQEVIEGIHRIRKNGVLPFIATGRGHFELDEIMATTGITGAIAMNGQYIVLEGE
TIYKEEIPTASVEKLLDAAQPHSEALSFYDSQGYWVSELTDLAKRAYSYTHMPMPQVDARRYLSQEVNMLLVLTNQLSQV
EYYKEQVPELNFFMNSPSSIDVTNSTTNKGTGINHVKEVLNFTGQTFAFGDGRNDLDLFKAADHKTAMGNAVPELKELAD
FISTENTNHGIINAFNHWGIL

Sequences:

>Translated_261_residues
MENINDYKALAFFDLDGTLLNSQSKLDQEVIEGIHRIRKNGVLPFIATGRGHFELDEIMATTGITGAIAMNGQYIVLEGE
TIYKEEIPTASVEKLLDAAQPHSEALSFYDSQGYWVSELTDLAKRAYSYTHMPMPQVDARRYLSQEVNMLLVLTNQLSQV
EYYKEQVPELNFFMNSPSSIDVTNSTTNKGTGINHVKEVLNFTGQTFAFGDGRNDLDLFKAADHKTAMGNAVPELKELAD
FISTENTNHGIINAFNHWGIL
>Mature_261_residues
MENINDYKALAFFDLDGTLLNSQSKLDQEVIEGIHRIRKNGVLPFIATGRGHFELDEIMATTGITGAIAMNGQYIVLEGE
TIYKEEIPTASVEKLLDAAQPHSEALSFYDSQGYWVSELTDLAKRAYSYTHMPMPQVDARRYLSQEVNMLLVLTNQLSQV
EYYKEQVPELNFFMNSPSSIDVTNSTTNKGTGINHVKEVLNFTGQTFAFGDGRNDLDLFKAADHKTAMGNAVPELKELAD
FISTENTNHGIINAFNHWGIL

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI87081741, Length=258, Percent_Identity=22.093023255814, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786982, Length=257, Percent_Identity=25.2918287937743, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29193; Mature: 29193

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS01228 COF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENINDYKALAFFDLDGTLLNSQSKLDQEVIEGIHRIRKNGVLPFIATGRGHFELDEIMA
CCCCCCCEEEEEEECCCCEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH
TTGITGAIAMNGQYIVLEGETIYKEEIPTASVEKLLDAAQPHSEALSFYDSQGYWVSELT
HCCCCEEEEECCEEEEEECCEEEHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEHHHHH
DLAKRAYSYTHMPMPQVDARRYLSQEVNMLLVLTNQLSQVEYYKEQVPELNFFMNSPSSI
HHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCE
DVTNSTTNKGTGINHVKEVLNFTGQTFAFGDGRNDLDLFKAADHKTAMGNAVPELKELAD
EECCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCHHHHCCCCHHHHHHHH
FISTENTNHGIINAFNHWGIL
HHHCCCCCCCEEECHHHCCCC
>Mature Secondary Structure
MENINDYKALAFFDLDGTLLNSQSKLDQEVIEGIHRIRKNGVLPFIATGRGHFELDEIMA
CCCCCCCEEEEEEECCCCEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH
TTGITGAIAMNGQYIVLEGETIYKEEIPTASVEKLLDAAQPHSEALSFYDSQGYWVSELT
HCCCCEEEEECCEEEEEECCEEEHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEHHHHH
DLAKRAYSYTHMPMPQVDARRYLSQEVNMLLVLTNQLSQVEYYKEQVPELNFFMNSPSSI
HHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCE
DVTNSTTNKGTGINHVKEVLNFTGQTFAFGDGRNDLDLFKAADHKTAMGNAVPELKELAD
EECCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCHHHHCCCCHHHHHHHH
FISTENTNHGIINAFNHWGIL
HHHCCCCCCCEEECHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]