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The map label for this gene is ycaC [H]

Identifier: 125623589

GI number: 125623589

Start: 715942

End: 716562

Strand: Direct

Name: ycaC [H]

Synonym: llmg_0734

Alternate gene names: 125623589

Gene position: 715942-716562 (Clockwise)

Preceding gene: 125623588

Following gene: 125623590

Centisome position: 28.3

GC content: 36.71

Gene sequence:

>621_bases
ATGACAAGTTTAGAACCTAGAAACCCAGAAACAGATGAGTTACTTTCACCGGAGAACAGTATGTTTCTGTTGATTGATTA
CCAACCAACTCAGGTTAATTCTATTAATTCAATGAACAAACAAGACTTAATTAGAAATGTTACTAATTTAACAGAGCTGA
TGAAAACCTTTGATGTCCCGATCGTATTGTCTACAGTTAATGTAGCAACTGGTCGCAATAAAGAAACAATCCCCCAACTA
AAAGAATTATTAAGTGATGTAGTAAGTTATGATCGAACTTCAATTAATTCTTGGGAAGATAAGGAAGTTAACGAAGCAGT
TAAGAAAATTGGCCGAAAAAACATTATTATATGTGGGCTTTGGACAGAGGCTTGTCTAACTTTTCCTACCTTAGATGCTT
TGAAAGAAGGCTTTGAAGTCTTTGTTCCTGTAGATGCTGTTGGTGGAACAAGCAAAACAGCGCATGAAATGGCCCTGCGA
CGTGTAGAACAAGCTGGAGCAAAAATGACAAGTTTGGCTCAGATTGCTTGTGAGTTTCAACGTGATTGGAATCGAACAGA
CAGCGTCCCTGATTTCATCAAAATAATGCAAAAAAGTGGATTCTTCTTAAAACTCGAATAA

Upstream 100 bases:

>100_bases
TGATTTAAATTTACGAATTCTTTTTGGTTGAAGTTTAATTACAGAAAGGTTGCTTTAAAAGAAAAATAATGATATAGTTT
AGGCATAAAGGAGGATTCAC

Downstream 100 bases:

>100_bases
TTTAAGTAATATAGATATACTATACAAATATAAATGTGCAGAAATAATTTCTGTACATTTTTTAGTCCAGAATCATTAGA
TTATGAAAAATTGGACTAAT

Product: putative amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MTSLEPRNPETDELLSPENSMFLLIDYQPTQVNSINSMNKQDLIRNVTNLTELMKTFDVPIVLSTVNVATGRNKETIPQL
KELLSDVVSYDRTSINSWEDKEVNEAVKKIGRKNIIICGLWTEACLTFPTLDALKEGFEVFVPVDAVGGTSKTAHEMALR
RVEQAGAKMTSLAQIACEFQRDWNRTDSVPDFIKIMQKSGFFLKLE

Sequences:

>Translated_206_residues
MTSLEPRNPETDELLSPENSMFLLIDYQPTQVNSINSMNKQDLIRNVTNLTELMKTFDVPIVLSTVNVATGRNKETIPQL
KELLSDVVSYDRTSINSWEDKEVNEAVKKIGRKNIIICGLWTEACLTFPTLDALKEGFEVFVPVDAVGGTSKTAHEMALR
RVEQAGAKMTSLAQIACEFQRDWNRTDSVPDFIKIMQKSGFFLKLE
>Mature_205_residues
TSLEPRNPETDELLSPENSMFLLIDYQPTQVNSINSMNKQDLIRNVTNLTELMKTFDVPIVLSTVNVATGRNKETIPQLK
ELLSDVVSYDRTSINSWEDKEVNEAVKKIGRKNIIICGLWTEACLTFPTLDALKEGFEVFVPVDAVGGTSKTAHEMALRR
VEQAGAKMTSLAQIACEFQRDWNRTDSVPDFIKIMQKSGFFLKLE

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=192, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23248; Mature: 23117

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLEPRNPETDELLSPENSMFLLIDYQPTQVNSINSMNKQDLIRNVTNLTELMKTFDVP
CCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCC
IVLSTVNVATGRNKETIPQLKELLSDVVSYDRTSINSWEDKEVNEAVKKIGRKNIIICGL
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE
WTEACLTFPTLDALKEGFEVFVPVDAVGGTSKTAHEMALRRVEQAGAKMTSLAQIACEFQ
HHHHHHHCCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
RDWNRTDSVPDFIKIMQKSGFFLKLE
HHCCCCCCHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure 
TSLEPRNPETDELLSPENSMFLLIDYQPTQVNSINSMNKQDLIRNVTNLTELMKTFDVP
CCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCC
IVLSTVNVATGRNKETIPQLKELLSDVVSYDRTSINSWEDKEVNEAVKKIGRKNIIICGL
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE
WTEACLTFPTLDALKEGFEVFVPVDAVGGTSKTAHEMALRRVEQAGAKMTSLAQIACEFQ
HHHHHHHCCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
RDWNRTDSVPDFIKIMQKSGFFLKLE
HHCCCCCCHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]