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The map label for this gene is ctsR [H]

Identifier: 125623475

GI number: 125623475

Start: 602409

End: 602864

Strand: Direct

Name: ctsR [H]

Synonym: llmg_0614

Alternate gene names: 125623475

Gene position: 602409-602864 (Clockwise)

Preceding gene: 125623474

Following gene: 125623476

Centisome position: 23.82

GC content: 36.4

Gene sequence:

>456_bases
ATGGCAGGTCAAAAAAACACATCAGATATTATTGAAGCTTATCTGAGACAACTCCTAGAAGAAGCACAGGTTATTGAAAT
AAAACGGGCTGATTTAGCTAATCAATTTGACGTAGTTCCAAGTCAGATTAATTATGTTATTAAAACTCGTTTTACAGCCT
CTAAAGGTTTTGATGTAGAATCAAAACGTGGCGGCGGTGGTTACATCAAAATTGTAAAATATCAATATTCCGCTCGTCAT
GAATTTTTAACGGCCCTTTATCAAAAGGTTCCAGCAAATCTCTCAAGTAAGGCTGCTCATGACATCGTTCAACTTCTTTT
TGATGAAAAAGTACTGACAGAACGTGAAGGGAATTTACTATTGCTCGTAATCACTGACGGAGCCATCAGTCCCTTTACTC
GTGGTATAATGATGAAAAGTATAATAAACAGATTGGATCGTGACGATGAAATTTGA

Upstream 100 bases:

>100_bases
CTGAAAAACGCTATTTTTGGTAAAAAAAGTATTTTTTAGGTATAATAGTCAGTAATAGTCAAAGATTATTTAGAAAATGG
ATAAAAGAAAGGATGGATCG

Downstream 100 bases:

>100_bases
AAATGTAAAATATACACCAACACTGGACCGAATTTTCGAGAAAGCAGCAGAATATGCCCACCAATATCAATACGGTACGA
TTGAAAGTGCTCATTTATTG

Product: transcriptional regulator ctsR

Products: NA

Alternate protein names: Class three stress gene repressor [H]

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MAGQKNTSDIIEAYLRQLLEEAQVIEIKRADLANQFDVVPSQINYVIKTRFTASKGFDVESKRGGGGYIKIVKYQYSARH
EFLTALYQKVPANLSSKAAHDIVQLLFDEKVLTEREGNLLLLVITDGAISPFTRGIMMKSIINRLDRDDEI

Sequences:

>Translated_151_residues
MAGQKNTSDIIEAYLRQLLEEAQVIEIKRADLANQFDVVPSQINYVIKTRFTASKGFDVESKRGGGGYIKIVKYQYSARH
EFLTALYQKVPANLSSKAAHDIVQLLFDEKVLTEREGNLLLLVITDGAISPFTRGIMMKSIINRLDRDDEI
>Mature_150_residues
AGQKNTSDIIEAYLRQLLEEAQVIEIKRADLANQFDVVPSQINYVIKTRFTASKGFDVESKRGGGGYIKIVKYQYSARHE
FLTALYQKVPANLSSKAAHDIVQLLFDEKVLTEREGNLLLLVITDGAISPFTRGIMMKSIINRLDRDDEI

Specific function: Binds to the ftsH promoter region, leading to repression of its expression [H]

COG id: COG4463

COG function: function code K; Transcriptional repressor of class III stress genes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CtsR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008463 [H]

Pfam domain/function: PF05848 CtsR [H]

EC number: NA

Molecular weight: Translated: 17051; Mature: 16920

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGQKNTSDIIEAYLRQLLEEAQVIEIKRADLANQFDVVPSQINYVIKTRFTASKGFDVE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHEEEECCCCCCCC
SKRGGGGYIKIVKYQYSARHEFLTALYQKVPANLSSKAAHDIVQLLFDEKVLTEREGNLL
CCCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
LLVITDGAISPFTRGIMMKSIINRLDRDDEI
EEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AGQKNTSDIIEAYLRQLLEEAQVIEIKRADLANQFDVVPSQINYVIKTRFTASKGFDVE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHEEEECCCCCCCC
SKRGGGGYIKIVKYQYSARHEFLTALYQKVPANLSSKAAHDIVQLLFDEKVLTEREGNLL
CCCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
LLVITDGAISPFTRGIMMKSIINRLDRDDEI
EEEEECCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566 [H]