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The map label for this gene is pvaA [H]

Identifier: 125623429

GI number: 125623429

Start: 557176

End: 557778

Strand: Direct

Name: pvaA [H]

Synonym: llmg_0564

Alternate gene names: 125623429

Gene position: 557176-557778 (Clockwise)

Preceding gene: 125623428

Following gene: 125623430

Centisome position: 22.03

GC content: 35.16

Gene sequence:

>603_bases
ATGTTTAAAAAATTAATTGGATTAATAATGCTGATACTTCTTGTATTCGGTGGTTTTTACGTTTACCGTATGCACGAAAA
TGTGAAACATGTAATGTCTTATGAAGCAGAGGTTGAGAAAACCCTGAAAGCACAAGGTTTAAGCGGGGATACAAAGTTAG
CGCTTGCGATTATTTATACTGAAACTAAAGGAAAACAAGTTGATATCATGCAGTCCAGCGAAAGCTTGAATGGAAAAACA
AATACCTTTTCCACAGAGGAAGAAAGTATAAAACAGGGGATTGCTAATCTTTCAAAGGTATTAGAATACGCATCAGAAAA
GAAAGTTGATGCTTGGACGGGAGTTCAGGCCTATAACTATGGAAGAGCTTATGTTGATTATATTGCGGCCCATGGAGGCA
AGAATACAATTGCTCTTTCAAAAGCATATTCCAAAGATGTCGTTGCCCCAAGTTTAGGAAATACGACTGGTGAGACTTAT
TATCATTTGACGTTTGATTCTTTATTTTACAACCAAGGAAAACTCTATTCTAATGGTGGAAATATTTTTTACGCCAAAGA
AGTTGAATGGAACATGTTATTACTTGATTTGTTAAATTGGTAA

Upstream 100 bases:

>100_bases
TATATAAAAATGACCGCATAAAAATATTGATATGTACTAGTGAAAAAATTAATTGAAGAGAATTAATTAAAAGTCGGTCA
GAAAAATTTAGGTAAGTGAT

Downstream 100 bases:

>100_bases
GATGCTGTTTAGACAGAAGTTCACATCATTGATGTGATTTTTGTCGAACAGTATTTTTTTATATTTGAATTATCAGAAAA
TTATATTATAATAGTGTTTA

Product: putative soluble lytic murein transglycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MFKKLIGLIMLILLVFGGFYVYRMHENVKHVMSYEAEVEKTLKAQGLSGDTKLALAIIYTETKGKQVDIMQSSESLNGKT
NTFSTEEESIKQGIANLSKVLEYASEKKVDAWTGVQAYNYGRAYVDYIAAHGGKNTIALSKAYSKDVVAPSLGNTTGETY
YHLTFDSLFYNQGKLYSNGGNIFYAKEVEWNMLLLDLLNW

Sequences:

>Translated_200_residues
MFKKLIGLIMLILLVFGGFYVYRMHENVKHVMSYEAEVEKTLKAQGLSGDTKLALAIIYTETKGKQVDIMQSSESLNGKT
NTFSTEEESIKQGIANLSKVLEYASEKKVDAWTGVQAYNYGRAYVDYIAAHGGKNTIALSKAYSKDVVAPSLGNTTGETY
YHLTFDSLFYNQGKLYSNGGNIFYAKEVEWNMLLLDLLNW
>Mature_200_residues
MFKKLIGLIMLILLVFGGFYVYRMHENVKHVMSYEAEVEKTLKAQGLSGDTKLALAIIYTETKGKQVDIMQSSESLNGKT
NTFSTEEESIKQGIANLSKVLEYASEKKVDAWTGVQAYNYGRAYVDYIAAHGGKNTIALSKAYSKDVVAPSLGNTTGETY
YHLTFDSLFYNQGKLYSNGGNIFYAKEVEWNMLLLDLLNW

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cell surface (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22451; Mature: 22451

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKLIGLIMLILLVFGGFYVYRMHENVKHVMSYEAEVEKTLKAQGLSGDTKLALAIIYT
CHHHHHHHHHHHHHHHCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE
ETKGKQVDIMQSSESLNGKTNTFSTEEESIKQGIANLSKVLEYASEKKVDAWTGVQAYNY
CCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHCC
GRAYVDYIAAHGGKNTIALSKAYSKDVVAPSLGNTTGETYYHLTFDSLFYNQGKLYSNGG
CHHHHHHHHHCCCCCEEEEECHHCCCCCCCCCCCCCCCEEEEEEEHHHEECCCEEEECCC
NIFYAKEVEWNMLLLDLLNW
CEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure
MFKKLIGLIMLILLVFGGFYVYRMHENVKHVMSYEAEVEKTLKAQGLSGDTKLALAIIYT
CHHHHHHHHHHHHHHHCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE
ETKGKQVDIMQSSESLNGKTNTFSTEEESIKQGIANLSKVLEYASEKKVDAWTGVQAYNY
CCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHCC
GRAYVDYIAAHGGKNTIALSKAYSKDVVAPSLGNTTGETYYHLTFDSLFYNQGKLYSNGG
CHHHHHHHHHCCCCCEEEEECHHCCCCCCCCCCCCCCCEEEEEEEHHHEECCCEEEECCC
NIFYAKEVEWNMLLLDLLNW
CEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11179332; 11463916 [H]