Click here to switch to the map view.

The map label for this gene is rsmI [H]

Identifier: 125623286

GI number: 125623286

Start: 411891

End: 412766

Strand: Direct

Name: rsmI [H]

Synonym: llmg_0419

Alternate gene names: 125623286

Gene position: 411891-412766 (Clockwise)

Preceding gene: 125623285

Following gene: 125623291

Centisome position: 16.28

GC content: 36.99

Gene sequence:

>876_bases
ATGGAAAATAAATTTAATATTCAACGGTCATTCAAAGGAGTGAAAACTGCTGGAAGTCTCTACTTGGTGCCGACCCCCAT
TGGGAATATGCAAGATATGACTTTGCGCTCATTGGAAACTTTAAAAACAGTGGATTTGATTTGTTCAGAAGATACTAGAA
ACACTTTACGACTTTTGAATCATTTTGAAATAAAAGTGCCCCAAGAATCATTTCATGAGCATAATTCGCAAGAAAAAATT
CCAAAATTGATTGACTTTTTAAAATCAGGTCAATCAATTGCACAGGTTTCTGATGCAGGAATGCCATCAATTTCTGACCC
TGGACATGACTTGGTTTTAGCTGCAATTAAAGAAGAAATTGATGTCGTTGCGCTGCCAGGAGCTTCCGCGGGAATTACTG
CTTTGATAGCTTCAGGCTTAGTGCCTCAGCCTCATATTTTTTATGGTTTTCTTCCTCGTAAAAAAGGAGAACAACAAAAA
TTTCTGAAAACAAAACTTGCTTACCCTGAAACACAAATTTTCTATGAGAGTCCATTTAGAGTTGCTGATACTTTATCCAA
TATGCAAGAAATCTATGGGGATAGAGAAGTGGTGCTTGTTCGTGAGTTGACCAAGATTTATGAAGAATATCGCCGAGGAA
AAATTTCTGAGGTTTTGAATTCTTTAGTTGAGCAACCCATTAAGGGAGAATGTTTAATTATTGTTTCGGGAGCGGACGAA
TTAGTTCAAGAAATTCAGGAGCCAGAGCTGACAGCACTGGAAGCTGTCAAAAATTTAGTGGCGCAAAATGTAAAACCGAA
TGTCGCCATTAAAGAAATTGCTAAAGAACGAGGCTTAAATCGCCAAGATTTATATGCAGAATTTCATGATTTATAA

Upstream 100 bases:

>100_bases
AAATTTTTAATGAAGGATTTCATATTTGTCATTTACATTATGCTGAACGGTTGGCTGAAGGGGAATCTTGCTTAGATTGT
TTGGAGCTTTTATATCGCTA

Downstream 100 bases:

>100_bases
TAATAAAAAGTTACTGACAGAGTTCTTGTCAGTAACTTTTTGTATTTTTGATGAATTATAATTTCTGTCAGTAAAATTTA
ACAATGCCCATCAACATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MENKFNIQRSFKGVKTAGSLYLVPTPIGNMQDMTLRSLETLKTVDLICSEDTRNTLRLLNHFEIKVPQESFHEHNSQEKI
PKLIDFLKSGQSIAQVSDAGMPSISDPGHDLVLAAIKEEIDVVALPGASAGITALIASGLVPQPHIFYGFLPRKKGEQQK
FLKTKLAYPETQIFYESPFRVADTLSNMQEIYGDREVVLVRELTKIYEEYRRGKISEVLNSLVEQPIKGECLIIVSGADE
LVQEIQEPELTALEAVKNLVAQNVKPNVAIKEIAKERGLNRQDLYAEFHDL

Sequences:

>Translated_291_residues
MENKFNIQRSFKGVKTAGSLYLVPTPIGNMQDMTLRSLETLKTVDLICSEDTRNTLRLLNHFEIKVPQESFHEHNSQEKI
PKLIDFLKSGQSIAQVSDAGMPSISDPGHDLVLAAIKEEIDVVALPGASAGITALIASGLVPQPHIFYGFLPRKKGEQQK
FLKTKLAYPETQIFYESPFRVADTLSNMQEIYGDREVVLVRELTKIYEEYRRGKISEVLNSLVEQPIKGECLIIVSGADE
LVQEIQEPELTALEAVKNLVAQNVKPNVAIKEIAKERGLNRQDLYAEFHDL
>Mature_291_residues
MENKFNIQRSFKGVKTAGSLYLVPTPIGNMQDMTLRSLETLKTVDLICSEDTRNTLRLLNHFEIKVPQESFHEHNSQEKI
PKLIDFLKSGQSIAQVSDAGMPSISDPGHDLVLAAIKEEIDVVALPGASAGITALIASGLVPQPHIFYGFLPRKKGEQQK
FLKTKLAYPETQIFYESPFRVADTLSNMQEIYGDREVVLVRELTKIYEEYRRGKISEVLNSLVEQPIKGECLIIVSGADE
LVQEIQEPELTALEAVKNLVAQNVKPNVAIKEIAKERGLNRQDLYAEFHDL

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=246, Percent_Identity=45.1219512195122, Blast_Score=184, Evalue=6e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32632; Mature: 32632

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKFNIQRSFKGVKTAGSLYLVPTPIGNMQDMTLRSLETLKTVDLICSEDTRNTLRLLN
CCCCCCHHHHHCCHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
HFEIKVPQESFHEHNSQEKIPKLIDFLKSGQSIAQVSDAGMPSISDPGHDLVLAAIKEEI
HHHEECCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCC
DVVALPGASAGITALIASGLVPQPHIFYGFLPRKKGEQQKFLKTKLAYPETQIFYESPFR
CEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCHH
VADTLSNMQEIYGDREVVLVRELTKIYEEYRRGKISEVLNSLVEQPIKGECLIIVSGADE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCHHH
LVQEIQEPELTALEAVKNLVAQNVKPNVAIKEIAKERGLNRQDLYAEFHDL
HHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MENKFNIQRSFKGVKTAGSLYLVPTPIGNMQDMTLRSLETLKTVDLICSEDTRNTLRLLN
CCCCCCHHHHHCCHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
HFEIKVPQESFHEHNSQEKIPKLIDFLKSGQSIAQVSDAGMPSISDPGHDLVLAAIKEEI
HHHEECCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCC
DVVALPGASAGITALIASGLVPQPHIFYGFLPRKKGEQQKFLKTKLAYPETQIFYESPFR
CEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCHH
VADTLSNMQEIYGDREVVLVRELTKIYEEYRRGKISEVLNSLVEQPIKGECLIIVSGADE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCHHH
LVQEIQEPELTALEAVKNLVAQNVKPNVAIKEIAKERGLNRQDLYAEFHDL
HHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]