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The map label for this gene is yeaD [H]

Identifier: 125623285

GI number: 125623285

Start: 411565

End: 411891

Strand: Direct

Name: yeaD [H]

Synonym: llmg_0418

Alternate gene names: 125623285

Gene position: 411565-411891 (Clockwise)

Preceding gene: 125623284

Following gene: 125623286

Centisome position: 16.27

GC content: 35.47

Gene sequence:

>327_bases
ATGGCTGATAAATATGATGTTTTTGACCAATTGGGCGAGCTTGAAAATACATTAAATACCACATTAACGCAAATTTCAGG
AATTCGCCAAGTGCTTGAAGCATCAATGACTGAAAATGCAACTTTACGCATGGAGTTGGAAAAATTGCGTGATCGACTTG
CTGAATTTGAAAAGAAAGAAGTTAAAAAAGAAACGCCCAAAGATCAACCCAACCCTAATCTCATTCAAATTTTTAATGAA
GGATTTCATATTTGTCATTTACATTATGCTGAACGGTTGGCTGAAGGGGAATCTTGCTTAGATTGTTTGGAGCTTTTATA
TCGCTAA

Upstream 100 bases:

>100_bases
AAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTGAAAATACGCTTTGGAGAATATAGCAAGGATTTTGAACT
TGCAGAGATTGAGGTGAATC

Downstream 100 bases:

>100_bases
TGGAAAATAAATTTAATATTCAACGGTCATTCAAAGGAGTGAAAACTGCTGGAAGTCTCTACTTGGTGCCGACCCCCATT
GGGAATATGCAAGATATGAC

Product: DNA replication intiation control protein YabA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MADKYDVFDQLGELENTLNTTLTQISGIRQVLEASMTENATLRMELEKLRDRLAEFEKKEVKKETPKDQPNPNLIQIFNE
GFHICHLHYAERLAEGESCLDCLELLYR

Sequences:

>Translated_108_residues
MADKYDVFDQLGELENTLNTTLTQISGIRQVLEASMTENATLRMELEKLRDRLAEFEKKEVKKETPKDQPNPNLIQIFNE
GFHICHLHYAERLAEGESCLDCLELLYR
>Mature_107_residues
ADKYDVFDQLGELENTLNTTLTQISGIRQVLEASMTENATLRMELEKLRDRLAEFEKKEVKKETPKDQPNPNLIQIFNEG
FHICHLHYAERLAEGESCLDCLELLYR

Specific function: Involved in initiation control of chromosome replication [H]

COG id: COG4467

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yabA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010377 [H]

Pfam domain/function: PF06156 DUF972 [H]

EC number: NA

Molecular weight: Translated: 12586; Mature: 12455

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKYDVFDQLGELENTLNTTLTQISGIRQVLEASMTENATLRMELEKLRDRLAEFEKKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VKKETPKDQPNPNLIQIFNEGFHICHLHYAERLAEGESCLDCLELLYR
HHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHC
>Mature Secondary Structure 
ADKYDVFDQLGELENTLNTTLTQISGIRQVLEASMTENATLRMELEKLRDRLAEFEKKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VKKETPKDQPNPNLIQIFNEGFHICHLHYAERLAEGESCLDCLELLYR
HHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]