Click here to switch to the map view.

The map label for this gene is napB [H]

Identifier: 125623192

GI number: 125623192

Start: 308410

End: 308883

Strand: Reverse

Name: napB [H]

Synonym: llmg_0321

Alternate gene names: 125623192

Gene position: 308883-308410 (Counterclockwise)

Preceding gene: 125623193

Following gene: 125623191

Centisome position: 12.21

GC content: 30.59

Gene sequence:

>474_bases
ATGACTCAGTTTCAAGAAAATCAGGAACAAATTATGACCTCTTTGACTAACTTGTTTAACAAAATTGATGCTTATTATAA
GCCACAGATGGAAGCTGAATTTTCAAATATTTCATTATCAGAAATCGAAACAATCGAATTTATAGCCAAAACTCCCTATC
CTAATGTGACAAAATTAGCTCATCATCTTTATATGACACGCGGTGCTGCCAGTAAAATTGCTAAAAAACTTCTCAAAAAA
AATCTGATTGAAAGTTATCAAATTCCTCAAAATAAAAAAGAAATTTATTTTCGATTAACGAAAGAGGGGCAACAAATCAA
TGACCGTCACGAAAGTCTTCACCAAAAATTTTCCCAAAATGACCAAGTGATCTTTGACGAATTAACTGATGAAGCCGTCA
GTAATATTTTAGAATTCCTTGATAAATACAATAATCACCTTGATTCTTCTATCCGAAAAAATATTGAAAAATAA

Upstream 100 bases:

>100_bases
AAAATGAACAAAATTTTATTGTCACAAGCATTTGGCGCCGAAATGACTATTGGTCTTGCATTTATCGGCAAAGCACTTTA
AAGATGGAGGAAAATGACTC

Downstream 100 bases:

>100_bases
GTCTGTCAGTAAATTAATTTTTACTGATGGTTTTTTTATTTGTTTTTTGTTGACAAAGAAACAATAACGCGATATACTAT
TTTTGTTTCCAAGGAAACTC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MTQFQENQEQIMTSLTNLFNKIDAYYKPQMEAEFSNISLSEIETIEFIAKTPYPNVTKLAHHLYMTRGAASKIAKKLLKK
NLIESYQIPQNKKEIYFRLTKEGQQINDRHESLHQKFSQNDQVIFDELTDEAVSNILEFLDKYNNHLDSSIRKNIEK

Sequences:

>Translated_157_residues
MTQFQENQEQIMTSLTNLFNKIDAYYKPQMEAEFSNISLSEIETIEFIAKTPYPNVTKLAHHLYMTRGAASKIAKKLLKK
NLIESYQIPQNKKEIYFRLTKEGQQINDRHESLHQKFSQNDQVIFDELTDEAVSNILEFLDKYNNHLDSSIRKNIEK
>Mature_156_residues
TQFQENQEQIMTSLTNLFNKIDAYYKPQMEAEFSNISLSEIETIEFIAKTPYPNVTKLAHHLYMTRGAASKIAKKLLKKN
LIESYQIPQNKKEIYFRLTKEGQQINDRHESLHQKFSQNDQVIFDELTDEAVSNILEFLDKYNNHLDSSIRKNIEK

Specific function: Involved in protein secretion [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18505; Mature: 18374

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQFQENQEQIMTSLTNLFNKIDAYYKPQMEAEFSNISLSEIETIEFIAKTPYPNVTKLA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHH
HHLYMTRGAASKIAKKLLKKNLIESYQIPQNKKEIYFRLTKEGQQINDRHESLHQKFSQN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
DQVIFDELTDEAVSNILEFLDKYNNHLDSSIRKNIEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQFQENQEQIMTSLTNLFNKIDAYYKPQMEAEFSNISLSEIETIEFIAKTPYPNVTKLA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHH
HHLYMTRGAASKIAKKLLKKNLIESYQIPQNKKEIYFRLTKEGQQINDRHESLHQKFSQN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
DQVIFDELTDEAVSNILEFLDKYNNHLDSSIRKNIEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]