Click here to switch to the map view.

The map label for this gene is glf1 [H]

Identifier: 125623101

GI number: 125623101

Start: 212853

End: 213983

Strand: Direct

Name: glf1 [H]

Synonym: llmg_0224

Alternate gene names: 125623101

Gene position: 212853-213983 (Clockwise)

Preceding gene: 125623100

Following gene: 125623102

Centisome position: 8.41

GC content: 34.66

Gene sequence:

>1131_bases
ATGGAATATAATACAAAAAACTATGATTACTTAATTGTTGGTGCAGGACCTTATGGTGCAATTTTCGCCCATGAAGCAGC
TAAACGTGGAAAGCGTAGCTTGATTATTGAACGACGCGCGCACGTTGGCGGGAATATGTATACCCATAAAGAAAATGGCA
TTAATGTCCATGATTTTGGGGCACATATTTTCCATACAGACAATAAAGAAGTTTGGGATTATGTTAATCAATTTACCGAG
TTTAATGGCTATATTAACCAAGTAGTTGCTAATTATAAAGGTGAACTCTACAATCTCCCATTTAACATGAATACTTTCTA
TCAAATGTGGGGAGTGAAGACTCCAGAAGAAGCTGCTGCAAAGATTGAGGAGCAAAAAGTTGCTGCTGGTCTTTCTGGTA
TCCCCAAAAATCTTGAAGAACAAGCTATCTCTTTAATTGGTACTGATATTTATACAAAATTGATTAAAGGATATACAGAA
AAACAATGGGGGCGTAAAGCTACAGAATTACCAAGTTTTATTATCCGTCGTTTACCAGTTCGTTATACCTTTGATAATAA
CTATTTCAATCATCGTTATCAAGGAGTTCCAGTGGATGGATACACAGCAATTTTTGATAAGATGCTGGACTCTGAATTGA
TCGATGTTCAAGTAAATACTGACTTTTTCTCACATAAAGAAGAATATTTAGCAGAATTTCCTAAAATCGTTTATACAGGA
ATGATTGACCAATACTTTAATTATGAACTTGGTGAATTAGAATATCGTTCTGTTCGTTTTGAATCAGAAACTTTTGAAAC
TGACAACAAACAAGGAAATGCTGTTATCAATTATACAGATGCTGAGACTCCGTTTACACGCGTGATGGAATGGCGTCACT
TTGATAAAAAAGGTGATGAAAATAAAACAATCATCACTAAGGAATATCCTCAAGATTGGGATCGTACGAAGGAAGCTTAT
TACCCTGTCAATGATACGAAAAACTCGGAACTCTTTAAGAAATATCGTAAATTAGCAGATAATGAAAAAACAGTAATATT
TGGTGGTCGTTTGGGTAACTATCAGTATTATGATATGGACCAAGTCTTTAATGCAGCTTTAAAAGCTGTCGAAAAGGAAT
TTAAAGATTGA

Upstream 100 bases:

>100_bases
TGAAATTAAATGTTAAAGAAATAGGACAAAAGATTTGTTCAGGATACTTTTTGAATGAAGCTTTGAAAAAAGCAGAAACA
GTCATTGAGGAAAATAAATA

Downstream 100 bases:

>100_bases
AAGTATTAAAAAACTATCTTCTGAATAGCTCTTACCAATTATTGATTGTGATTATTCCAATTATCACGATTCCTTATATT
TCTAGGGTGCTTGGCACAAC

Product: Glf1 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MEYNTKNYDYLIVGAGPYGAIFAHEAAKRGKRSLIIERRAHVGGNMYTHKENGINVHDFGAHIFHTDNKEVWDYVNQFTE
FNGYINQVVANYKGELYNLPFNMNTFYQMWGVKTPEEAAAKIEEQKVAAGLSGIPKNLEEQAISLIGTDIYTKLIKGYTE
KQWGRKATELPSFIIRRLPVRYTFDNNYFNHRYQGVPVDGYTAIFDKMLDSELIDVQVNTDFFSHKEEYLAEFPKIVYTG
MIDQYFNYELGELEYRSVRFESETFETDNKQGNAVINYTDAETPFTRVMEWRHFDKKGDENKTIITKEYPQDWDRTKEAY
YPVNDTKNSELFKKYRKLADNEKTVIFGGRLGNYQYYDMDQVFNAALKAVEKEFKD

Sequences:

>Translated_376_residues
MEYNTKNYDYLIVGAGPYGAIFAHEAAKRGKRSLIIERRAHVGGNMYTHKENGINVHDFGAHIFHTDNKEVWDYVNQFTE
FNGYINQVVANYKGELYNLPFNMNTFYQMWGVKTPEEAAAKIEEQKVAAGLSGIPKNLEEQAISLIGTDIYTKLIKGYTE
KQWGRKATELPSFIIRRLPVRYTFDNNYFNHRYQGVPVDGYTAIFDKMLDSELIDVQVNTDFFSHKEEYLAEFPKIVYTG
MIDQYFNYELGELEYRSVRFESETFETDNKQGNAVINYTDAETPFTRVMEWRHFDKKGDENKTIITKEYPQDWDRTKEAY
YPVNDTKNSELFKKYRKLADNEKTVIFGGRLGNYQYYDMDQVFNAALKAVEKEFKD
>Mature_376_residues
MEYNTKNYDYLIVGAGPYGAIFAHEAAKRGKRSLIIERRAHVGGNMYTHKENGINVHDFGAHIFHTDNKEVWDYVNQFTE
FNGYINQVVANYKGELYNLPFNMNTFYQMWGVKTPEEAAAKIEEQKVAAGLSGIPKNLEEQAISLIGTDIYTKLIKGYTE
KQWGRKATELPSFIIRRLPVRYTFDNNYFNHRYQGVPVDGYTAIFDKMLDSELIDVQVNTDFFSHKEEYLAEFPKIVYTG
MIDQYFNYELGELEYRSVRFESETFETDNKQGNAVINYTDAETPFTRVMEWRHFDKKGDENKTIITKEYPQDWDRTKEAY
YPVNDTKNSELFKKYRKLADNEKTVIFGGRLGNYQYYDMDQVFNAALKAVEKEFKD

Specific function: Involved in the conversion of UDP-GalP into UDP-GalF through a 2-keto intermediate [H]

COG id: COG0562

COG function: function code M; UDP-galactopyranose mutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788348, Length=364, Percent_Identity=57.967032967033, Blast_Score=439, Evalue=1e-124,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR016040
- InterPro:   IPR001327
- InterPro:   IPR004379
- InterPro:   IPR015899 [H]

Pfam domain/function: PF03275 GLF; PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =5.4.99.9 [H]

Molecular weight: Translated: 44065; Mature: 44065

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYNTKNYDYLIVGAGPYGAIFAHEAAKRGKRSLIIERRAHVGGNMYTHKENGINVHDFG
CCCCCCCCCEEEEECCCCCHHHHHHHHHCCCHHEEEEHHHHCCCCEEEECCCCCEEEECC
AHIFHTDNKEVWDYVNQFTEFNGYINQVVANYKGELYNLPFNMNTFYQMWGVKTPEEAAA
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHCCCCCHHHHHH
KIEEQKVAAGLSGIPKNLEEQAISLIGTDIYTKLIKGYTEKQWGRKATELPSFIIRRLPV
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHCCE
RYTFDNNYFNHRYQGVPVDGYTAIFDKMLDSELIDVQVNTDFFSHKEEYLAEFPKIVYTG
EEEECCCCCCCEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
MIDQYFNYELGELEYRSVRFESETFETDNKQGNAVINYTDAETPFTRVMEWRHFDKKGDE
HHHHHHCCCCCCEEEEEEEECCHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
NKTIITKEYPQDWDRTKEAYYPVNDTKNSELFKKYRKLADNEKTVIFGGRLGNYQYYDMD
CCEEEECCCCCCHHHCCCCEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEECHH
QVFNAALKAVEKEFKD
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEYNTKNYDYLIVGAGPYGAIFAHEAAKRGKRSLIIERRAHVGGNMYTHKENGINVHDFG
CCCCCCCCCEEEEECCCCCHHHHHHHHHCCCHHEEEEHHHHCCCCEEEECCCCCEEEECC
AHIFHTDNKEVWDYVNQFTEFNGYINQVVANYKGELYNLPFNMNTFYQMWGVKTPEEAAA
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHCCCCCHHHHHH
KIEEQKVAAGLSGIPKNLEEQAISLIGTDIYTKLIKGYTEKQWGRKATELPSFIIRRLPV
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHCCE
RYTFDNNYFNHRYQGVPVDGYTAIFDKMLDSELIDVQVNTDFFSHKEEYLAEFPKIVYTG
EEEECCCCCCCEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
MIDQYFNYELGELEYRSVRFESETFETDNKQGNAVINYTDAETPFTRVMEWRHFDKKGDE
HHHHHHCCCCCCEEEEEEEECCHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
NKTIITKEYPQDWDRTKEAYYPVNDTKNSELFKKYRKLADNEKTVIFGGRLGNYQYYDMD
CCEEEECCCCCCHHHCCCCEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEECHH
QVFNAALKAVEKEFKD
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7517390; 7517391; 9097040; 9278503; 8576037 [H]