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The map label for this gene is ybfF [C]

Identifier: 125623095

GI number: 125623095

Start: 207843

End: 208580

Strand: Direct

Name: ybfF [C]

Synonym: llmg_0218

Alternate gene names: 125623095

Gene position: 207843-208580 (Clockwise)

Preceding gene: 125623094

Following gene: 125623096

Centisome position: 8.22

GC content: 34.55

Gene sequence:

>738_bases
GTGTCCGATGACAAAAAAATGAAAATTTTACTAATTATCCCAGCTTACAATGAAGGTGAGGGAATATTAGAAAATCTAAA
AATTGTAGAGGACTATCAAGCCAGTTGTCCTTATCAATTAGACTATGTAGTGATAAATGATGGTTCTACTGATAACGAAG
AAGAAATTTTGAGAGCAAACAACATTAACCACGTTGAATTGATTCAAAACCTTGGTATTGGTGGAGCTGTTCAAACAGGC
TATCTGTATGCCTTACAAAATGCTTATGACATAGCAGTTCAATTTGATGGGGATGGTCAACATGATATTCAATCCTTACC
AAACTTGATTGAACCTATTTTGAAGGATGAAGCTGATTTTACCGTTGGATCTAGATTTTTAGATGAAAGCAATTCTGAGT
TTAAGTCTTCAAAATCACGTCAAATGGGAATAAGAATTTTATCTTCACTCATTTACATGTCCTCAAAAATTAAAATCAAA
GATGTTACTAGTGGTTATCGCGCAGGTAACCGTAAAGTGATTGAGCAATTTGTTAAGAGATACCCAAGACAATATCCAGA
ACCTGAAAGTTACATGCATTTATTCTCTAAGAACATTCGTGTCAAAGAGGTGGGTGTAAAAATGTTTGAGCGGACAACTG
GTGTTTCAAGTATTAACATGGTAAAAGGGATAAGTTATATGATAAGCGTATCTTTGGCGATTATTGCGAGCTCGTTATTA
GGAAAGGAGAGTAAGTAA

Upstream 100 bases:

>100_bases
AGGCAAAAAAAATAAGTAAATTTGTGGTAAAATTTATATTAGAAAAATGTACATAAAGAAGTACAAAATTAATGTTTATT
TATAAGGAGAACTTGGAACA

Downstream 100 bases:

>100_bases
TGCCTATTCAACTTCGTATCTTAGCAATTATTTTGGCAGCTTTCTTCTTTATCTATACGATTCGTTTGGTTCGTAAAGAT
AGAGCAGAAATAAGACATAT

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSDDKKMKILLIIPAYNEGEGILENLKIVEDYQASCPYQLDYVVINDGSTDNEEEILRANNINHVELIQNLGIGGAVQTG
YLYALQNAYDIAVQFDGDGQHDIQSLPNLIEPILKDEADFTVGSRFLDESNSEFKSSKSRQMGIRILSSLIYMSSKIKIK
DVTSGYRAGNRKVIEQFVKRYPRQYPEPESYMHLFSKNIRVKEVGVKMFERTTGVSSINMVKGISYMISVSLAIIASSLL
GKESK

Sequences:

>Translated_245_residues
MSDDKKMKILLIIPAYNEGEGILENLKIVEDYQASCPYQLDYVVINDGSTDNEEEILRANNINHVELIQNLGIGGAVQTG
YLYALQNAYDIAVQFDGDGQHDIQSLPNLIEPILKDEADFTVGSRFLDESNSEFKSSKSRQMGIRILSSLIYMSSKIKIK
DVTSGYRAGNRKVIEQFVKRYPRQYPEPESYMHLFSKNIRVKEVGVKMFERTTGVSSINMVKGISYMISVSLAIIASSLL
GKESK
>Mature_244_residues
SDDKKMKILLIIPAYNEGEGILENLKIVEDYQASCPYQLDYVVINDGSTDNEEEILRANNINHVELIQNLGIGGAVQTGY
LYALQNAYDIAVQFDGDGQHDIQSLPNLIEPILKDEADFTVGSRFLDESNSEFKSSKSRQMGIRILSSLIYMSSKIKIKD
VTSGYRAGNRKVIEQFVKRYPRQYPEPESYMHLFSKNIRVKEVGVKMFERTTGVSSINMVKGISYMISVSLAIIASSLLG
KESK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 27552; Mature: 27421

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDKKMKILLIIPAYNEGEGILENLKIVEDYQASCPYQLDYVVINDGSTDNEEEILRAN
CCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHC
NINHVELIQNLGIGGAVQTGYLYALQNAYDIAVQFDGDGQHDIQSLPNLIEPILKDEADF
CCCHHHHHHHCCCCCCHHHCCCEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
TVGSRFLDESNSEFKSSKSRQMGIRILSSLIYMSSKIKIKDVTSGYRAGNRKVIEQFVKR
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHH
YPRQYPEPESYMHLFSKNIRVKEVGVKMFERTTGVSSINMVKGISYMISVSLAIIASSLL
HHHCCCCHHHHHHHHHCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GKESK
CCCCC
>Mature Secondary Structure 
SDDKKMKILLIIPAYNEGEGILENLKIVEDYQASCPYQLDYVVINDGSTDNEEEILRAN
CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHC
NINHVELIQNLGIGGAVQTGYLYALQNAYDIAVQFDGDGQHDIQSLPNLIEPILKDEADF
CCCHHHHHHHCCCCCCHHHCCCEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
TVGSRFLDESNSEFKSSKSRQMGIRILSSLIYMSSKIKIKDVTSGYRAGNRKVIEQFVKR
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHH
YPRQYPEPESYMHLFSKNIRVKEVGVKMFERTTGVSSINMVKGISYMISVSLAIIASSLL
HHHCCCCHHHHHHHHHCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GKESK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]