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The map label for this gene is oxaA1 [H]

Identifier: 125623022

GI number: 125623022

Start: 139136

End: 139945

Strand: Direct

Name: oxaA1 [H]

Synonym: llmg_0143

Alternate gene names: 125623022

Gene position: 139136-139945 (Clockwise)

Preceding gene: 125623021

Following gene: 125623023

Centisome position: 5.5

GC content: 37.16

Gene sequence:

>810_bases
TTGAAAAAGAAATTTAGTTTGATCGCAATGGCGGGAGCTGCCCTTTTGTTACTTACAGCCTGTGGAACCAAGGCAGTAAC
AGGTAGCTCCAGCAATCTTTGGGATCAAATCGTATATGGCTTTGCACAGGTTATTCGTTTCTTGTCATTTGGTGGTTTGA
CCGGAGTTGGTATTATTTTATTCACAATTATTATTCGGGCAGCATTGCTCCCGTTGATGAATATTCAAATCAAATCTAGC
CAACGTATGCAAGAAATTCAGCCAGAAATTAAAAAAATTCAGGCTAAATATCCAAGCAAAGATATGGAATCTCGTCGTTT
GATGAATGAAGAGATTCAAAAACTTTATGCTGAAAACAAAGTTAACCCTTATATGGGATGTTTACCTTTGGTTGTTCAGA
TGCCAGTGCTTTGGGCACTTTATCAAGCCTTGTCTCGTGTAGACTTTTTGAAACACGGAACTTTCCTCTGGTTTGAAATT
GGAGCAAAAGATCCAACTTTTATTTTACCTATATTGGCAGCAATCTTTACTTTCTTGAGCTCATATTTAATGATGAAGTC
TGCTCCTGAAAGAAATGCAATGACGACTTCAATGACTTATATTATGCCGATTTTCATCTTGATTATGGGTGTAAACTTTG
CGTCCGGAATTGCACTTTACTGGGTAATATCTAATGCTTTCCAAGTCTTTCAAACGATGTTGTTAGCTAATCCATACAAG
ATTATTGCAGCGCGAGAAGCTAAGGTACAGGTCGAAAAAGATAAAGTTAAAGCTCGTGAAAAAGCATTGAAGAAGGCAAG
AAAAAAATAA

Upstream 100 bases:

>100_bases
TCGCTCGTTCGGGTGTTGAGACACTTAGTTTTGAAGAAGTAAAGAAAAATCTGAGACACGTGTTGAAGTTGTCAAAAATC
TATGTGGATGGAGAAAACGA

Downstream 100 bases:

>100_bases
AAAATACCATTGGCAGTTTTTATTTTAATTGGAAGTTGTGCTAGAAATTGTCAATAGGCTTTATCATATGACAGGAGTAG
TTTGATTATGGCTATTTTTA

Product: preprotein translocase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKKKFSLIAMAGAALLLLTACGTKAVTGSSSNLWDQIVYGFAQVIRFLSFGGLTGVGIILFTIIIRAALLPLMNIQIKSS
QRMQEIQPEIKKIQAKYPSKDMESRRLMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKHGTFLWFEI
GAKDPTFILPILAAIFTFLSSYLMMKSAPERNAMTTSMTYIMPIFILIMGVNFASGIALYWVISNAFQVFQTMLLANPYK
IIAAREAKVQVEKDKVKAREKALKKARKK

Sequences:

>Translated_269_residues
MKKKFSLIAMAGAALLLLTACGTKAVTGSSSNLWDQIVYGFAQVIRFLSFGGLTGVGIILFTIIIRAALLPLMNIQIKSS
QRMQEIQPEIKKIQAKYPSKDMESRRLMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKHGTFLWFEI
GAKDPTFILPILAAIFTFLSSYLMMKSAPERNAMTTSMTYIMPIFILIMGVNFASGIALYWVISNAFQVFQTMLLANPYK
IIAAREAKVQVEKDKVKAREKALKKARKK
>Mature_269_residues
MKKKFSLIAMAGAALLLLTACGTKAVTGSSSNLWDQIVYGFAQVIRFLSFGGLTGVGIILFTIIIRAALLPLMNIQIKSS
QRMQEIQPEIKKIQAKYPSKDMESRRLMNEEIQKLYAENKVNPYMGCLPLVVQMPVLWALYQALSRVDFLKHGTFLWFEI
GAKDPTFILPILAAIFTFLSSYLMMKSAPERNAMTTSMTYIMPIFILIMGVNFASGIALYWVISNAFQVFQTMLLANPYK
IIAAREAKVQVEKDKVKAREKALKKARKK

Specific function: Required for the insertion of integral membrane proteins into the membrane. May also be involved in protein secretion processes [H]

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 2 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=217, Percent_Identity=31.3364055299539, Blast_Score=101, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708
- InterPro:   IPR023060 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 30308; Mature: 30308

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HEEEHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKKFSLIAMAGAALLLLTACGTKAVTGSSSNLWDQIVYGFAQVIRFLSFGGLTGVGIIL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FTIIIRAALLPLMNIQIKSSQRMQEIQPEIKKIQAKYPSKDMESRRLMNEEIQKLYAENK
HHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
VNPYMGCLPLVVQMPVLWALYQALSRVDFLKHGTFLWFEIGAKDPTFILPILAAIFTFLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH
SYLMMKSAPERNAMTTSMTYIMPIFILIMGVNFASGIALYWVISNAFQVFQTMLLANPYK
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IIAAREAKVQVEKDKVKAREKALKKARKK
HEEEHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]