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The map label for this gene is ywrF [H]

Identifier: 125622976

GI number: 125622976

Start: 92097

End: 92687

Strand: Direct

Name: ywrF [H]

Synonym: llmg_0097

Alternate gene names: 125622976

Gene position: 92097-92687 (Clockwise)

Preceding gene: 125622975

Following gene: 125622979

Centisome position: 3.64

GC content: 37.56

Gene sequence:

>591_bases
ATGAAATCATATCAAGCAGATGAGCTCGATGAAAAAACAGTCTATAAACTCTTATCGGGCAGTATTGTTCCTCGTCCGAT
TGCTTGGGTGACAAGTCAAAATTCCGATGGTTTAGTCAACGTAGCCCCCTTTAGCTTTTTCAACGTAGCTTCGGCTAATC
CGCCACTTTTGTCAATTTCATTCACGGGAAATAAGGATAGTCTCAACAATCTTTTGACAACAAAAGAAGCAGTTGTTCAT
CTTGTAAATGAAGACAATGTAGAATTAATGAATCAAACAGCGGCACCACTAGCCAAGCATATTAGTGAAGCAAAAGAATT
TTCATTGGAGCTTGTTCCTTCTCAGAAAGTTCAAGTTCCAAGTTTAAAGGAATCAAAGGTTCGCTTAGAAACTAAATTAT
ATCATCATTTACCTTTAGGTGAGAATGGACATTTAGTTCTTCTTGAAGTGGTAAATTTCTCATTTGCTGACGAGCTATTG
GACGAGGAAAACTTTCATGTCAATCTAACTAAACTCAAACCAGTTGGCCGCTTAGCAGGTGATGATTATAGCACTTTGGG
TAATCGATTTAGTCTTTTACGACCTAGATAA

Upstream 100 bases:

>100_bases
GCTCACCGTGATCGTACGAGAGATGAATTGTGGACGGTTGAAAAAGTATTGGAACATAAAGCGGGAACTCCAGTTGAAAC
GCTGAAATAAAGGAGAACTG

Downstream 100 bases:

>100_bases
ATAAAAAAACTTACTGATGGTTGGTCAGTAAGTTTTTTGTTTGATTTAAAAATAAAAAAATAACCCTAAGGTCATTTTTA
ATTATTTAACTTCTTTAAAG

Product: putative flavoprotein oxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKSYQADELDEKTVYKLLSGSIVPRPIAWVTSQNSDGLVNVAPFSFFNVASANPPLLSISFTGNKDSLNNLLTTKEAVVH
LVNEDNVELMNQTAAPLAKHISEAKEFSLELVPSQKVQVPSLKESKVRLETKLYHHLPLGENGHLVLLEVVNFSFADELL
DEENFHVNLTKLKPVGRLAGDDYSTLGNRFSLLRPR

Sequences:

>Translated_196_residues
MKSYQADELDEKTVYKLLSGSIVPRPIAWVTSQNSDGLVNVAPFSFFNVASANPPLLSISFTGNKDSLNNLLTTKEAVVH
LVNEDNVELMNQTAAPLAKHISEAKEFSLELVPSQKVQVPSLKESKVRLETKLYHHLPLGENGHLVLLEVVNFSFADELL
DEENFHVNLTKLKPVGRLAGDDYSTLGNRFSLLRPR
>Mature_196_residues
MKSYQADELDEKTVYKLLSGSIVPRPIAWVTSQNSDGLVNVAPFSFFNVASANPPLLSISFTGNKDSLNNLLTTKEAVVH
LVNEDNVELMNQTAAPLAKHISEAKEFSLELVPSQKVQVPSLKESKVRLETKLYHHLPLGENGHLVLLEVVNFSFADELL
DEENFHVNLTKLKPVGRLAGDDYSTLGNRFSLLRPR

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 21781; Mature: 21781

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSYQADELDEKTVYKLLSGSIVPRPIAWVTSQNSDGLVNVAPFSFFNVASANPPLLSIS
CCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCCEEECCCCCCCEEEEE
FTGNKDSLNNLLTTKEAVVHLVNEDNVELMNQTAAPLAKHISEAKEFSLELVPSQKVQVP
ECCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEECC
SLKESKVRLETKLYHHLPLGENGHLVLLEVVNFSFADELLDEENFHVNLTKLKPVGRLAG
CCCCHHHHHHHHHHEECCCCCCCCEEEEEECCCHHHHHHHCCCCCEEEEEEECCCCCCCC
DDYSTLGNRFSLLRPR
CCHHHHCCCCCCCCCC
>Mature Secondary Structure
MKSYQADELDEKTVYKLLSGSIVPRPIAWVTSQNSDGLVNVAPFSFFNVASANPPLLSIS
CCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCCEEECCCCCCCEEEEE
FTGNKDSLNNLLTTKEAVVHLVNEDNVELMNQTAAPLAKHISEAKEFSLELVPSQKVQVP
ECCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEECC
SLKESKVRLETKLYHHLPLGENGHLVLLEVVNFSFADELLDEENFHVNLTKLKPVGRLAG
CCCCHHHHHHHHHHEECCCCCCCCEEEEEECCCHHHHHHHCCCCCEEEEEEECCCCCCCC
DDYSTLGNRFSLLRPR
CCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]