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The map label for this gene is aroK [H]

Identifier: 124486463

GI number: 124486463

Start: 1679265

End: 1680107

Strand: Reverse

Name: aroK [H]

Synonym: Mlab_1651

Alternate gene names: 124486463

Gene position: 1680107-1679265 (Counterclockwise)

Preceding gene: 124486464

Following gene: 124486462

Centisome position: 93.08

GC content: 57.18

Gene sequence:

>843_bases
ATGATCGGTAAAGGCATGTCCTACGGTGCTTTGTCGGTGATCAATGCGGTATCTACCGGAAAAGGGGCAGCATTCGGCAT
AGACCTCAAAACCGAGGCGACCGTTCAGCTCATTTCAGAACCTGAGTTCACAGTTGAGATCGACGGCCACCCGACCGAGT
CCGTTTCCCTCGCTCGTTTTTCCGTCGAGGAAGTACTTCAGCGGTATCCCAACGCGGGAATGAACGGTGCGGTGATCCGG
ACCACCTCGAATATTCCCATATCCCAGGGCCTGAAAAGCAGCAGTTCCGCTGCGAACGCTATTATTTCGGCCACTGCCGC
GGCCCTTGGGGTTACGATCGATCCGCTCGAGATCGGCCGGATCGGCGCGACGGCCGCTATCAGGGCCGGCGTCAGTATAA
CCGGGGCATTTGATGATGCCTGCGCCTGTCAGCTCGGCGGTCTTGTCTTTACCGACAATTCTAACCGCGAACTTCTGCTC
CGCCGCCCGATGCCTGAAGGTTACACGGCTGTAATCCACATCCCGCCGTTCCAGATTCGGAAAACCACATTTCCGAGTGA
AAAGATGCGTGAAATGCGTGAAATGGTCGCGGCAGCTTACGATCTGGCGGTCGAAGGAGATGTTTTTTCAGCGATGTACG
TGAATGGAAGATGTACCTGTGAGGCGATCGGCATCACGCCGGAGACGGCCGATAGAGCCCTCTCATGCGGAGCCGCTGCG
GCCGGACTTTCCGGGACGGGTCCCGCCACCGGGATCCTTGTGCCGGATGAAGGCCTTGACGAATTTCTCGATCGGTTCGG
TCGGGAGAATGTTCTCCTCGCGAACATCAGGAACGGTGTGTAA

Upstream 100 bases:

>100_bases
AGACCATGCTTATCGAACAGGCCGCCGCGTCATTCACTCTCTGGACAGGAATTACTCCGAATCGTGATGTGATGAGAAAA
GCATTCGAAGCGAGGGCGGC

Downstream 100 bases:

>100_bases
GATGAAACTTATCGTATCTCGTTCTCAAATCTCCGGATGTGTCCATGCACCTCCCTCAAAAAGTCACACACACCGGGCAT
TTCTCCTTGCGTCTCTTGCA

Product: shikimate kinase

Products: NA

Alternate protein names: SK [H]

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MIGKGMSYGALSVINAVSTGKGAAFGIDLKTEATVQLISEPEFTVEIDGHPTESVSLARFSVEEVLQRYPNAGMNGAVIR
TTSNIPISQGLKSSSSAANAIISATAAALGVTIDPLEIGRIGATAAIRAGVSITGAFDDACACQLGGLVFTDNSNRELLL
RRPMPEGYTAVIHIPPFQIRKTTFPSEKMREMREMVAAAYDLAVEGDVFSAMYVNGRCTCEAIGITPETADRALSCGAAA
AGLSGTGPATGILVPDEGLDEFLDRFGRENVLLANIRNGV

Sequences:

>Translated_280_residues
MIGKGMSYGALSVINAVSTGKGAAFGIDLKTEATVQLISEPEFTVEIDGHPTESVSLARFSVEEVLQRYPNAGMNGAVIR
TTSNIPISQGLKSSSSAANAIISATAAALGVTIDPLEIGRIGATAAIRAGVSITGAFDDACACQLGGLVFTDNSNRELLL
RRPMPEGYTAVIHIPPFQIRKTTFPSEKMREMREMVAAAYDLAVEGDVFSAMYVNGRCTCEAIGITPETADRALSCGAAA
AGLSGTGPATGILVPDEGLDEFLDRFGRENVLLANIRNGV
>Mature_280_residues
MIGKGMSYGALSVINAVSTGKGAAFGIDLKTEATVQLISEPEFTVEIDGHPTESVSLARFSVEEVLQRYPNAGMNGAVIR
TTSNIPISQGLKSSSSAANAIISATAAALGVTIDPLEIGRIGATAAIRAGVSITGAFDDACACQLGGLVFTDNSNRELLL
RRPMPEGYTAVIHIPPFQIRKTTFPSEKMREMREMVAAAYDLAVEGDVFSAMYVNGRCTCEAIGITPETADRALSCGAAA
AGLSGTGPATGILVPDEGLDEFLDRFGRENVLLANIRNGV

Specific function: Unknown

COG id: COG1685

COG function: function code EH; Archaeal shikimate kinase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GHMP kinase family. Archaeal shikimate kinase subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006204
- InterPro:   IPR020568
- InterPro:   IPR014721
- InterPro:   IPR010189 [H]

Pfam domain/function: PF00288 GHMP_kinases_N [H]

EC number: =2.7.1.71 [H]

Molecular weight: Translated: 29204; Mature: 29204

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGKGMSYGALSVINAVSTGKGAAFGIDLKTEATVQLISEPEFTVEIDGHPTESVSLARF
CCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCEEHHHH
SVEEVLQRYPNAGMNGAVIRTTSNIPISQGLKSSSSAANAIISATAAALGVTIDPLEIGR
HHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHCCEECCCCCCC
IGATAAIRAGVSITGAFDDACACQLGGLVFTDNSNRELLLRRPMPEGYTAVIHIPPFQIR
CCCHHHHHCCCEEEECCCCHHHHHHCCEEEECCCCCEEEEECCCCCCCEEEEECCCCEEE
KTTFPSEKMREMREMVAAAYDLAVEGDVFSAMYVNGRCTCEAIGITPETADRALSCGAAA
ECCCCHHHHHHHHHHHHHHHHEEECCCEEEEEEECCEEEEEEECCCCCHHHHHHHCCHHH
AGLSGTGPATGILVPDEGLDEFLDRFGRENVLLANIRNGV
CCCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEECCCCC
>Mature Secondary Structure
MIGKGMSYGALSVINAVSTGKGAAFGIDLKTEATVQLISEPEFTVEIDGHPTESVSLARF
CCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCEEHHHH
SVEEVLQRYPNAGMNGAVIRTTSNIPISQGLKSSSSAANAIISATAAALGVTIDPLEIGR
HHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHCCEECCCCCCC
IGATAAIRAGVSITGAFDDACACQLGGLVFTDNSNRELLLRRPMPEGYTAVIHIPPFQIR
CCCHHHHHCCCEEEECCCCHHHHHHCCEEEECCCCCEEEEECCCCCCCEEEEECCCCEEE
KTTFPSEKMREMREMVAAAYDLAVEGDVFSAMYVNGRCTCEAIGITPETADRALSCGAAA
ECCCCHHHHHHHHHHHHHHHHEEECCCEEEEEEECCEEEEEEECCCCCHHHHHHHCCHHH
AGLSGTGPATGILVPDEGLDEFLDRFGRENVLLANIRNGV
CCCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA