| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is aroA
Identifier: 124486462
GI number: 124486462
Start: 1677995
End: 1679263
Strand: Reverse
Name: aroA
Synonym: Mlab_1650
Alternate gene names: 124486462
Gene position: 1679263-1677995 (Counterclockwise)
Preceding gene: 124486463
Following gene: 124486461
Centisome position: 93.04
GC content: 54.14
Gene sequence:
>1269_bases ATGAAACTTATCGTATCTCGTTCTCAAATCTCCGGATGTGTCCATGCACCTCCCTCAAAAAGTCACACACACCGGGCATT TCTCCTTGCGTCTCTTGCAAAAGGAGAATCGGTCGTTCTCTCTCCGCTTCTGGGCGAGGACACTCTGGCTACTCTCTCCG CGGTCAAAGCGCTTGGAGCGAACGTATGCGAAGGGGATGATCGAATCACGATCCAGGGCGGCAATTTACACGCCCCGCTC CCGAAAGGAACGGTGATAAACTGTAAAAACTCGGGCACCTCCATTCGGATGCTTGCAGGCATAGCTTCCCGTCTGGATGG AACGACTGAGTTCACGGGTGACGCTTCGCTCTGTTCCCGCCCTATGAAGCCTCTGCTTGACGCCCTGTCAGAACTTGGAG CCGGGGTAACATCCGACAACGGATGTGCTCCGTTCACCATAACGGGTCCGGTATCGGGCGGCGATGTCCATATTCGCGGT GACGTGAGTTCTCAATTCATCTCCGGCCTGCTGATCTCTGCTCCGCTTGGCAAAGCTGACACGAGGATCCACCTGACAAC TCCCCTCACGTCAAAACCATACGTGGACATGACGATTTCTGCTATGAAAAAGCACGGCGTTTCGGTCGAGACGATCGAAG ATGGATATCTTGTCCGTTCAGGTCAGGTCTATTCTTCCGAGGATGTTCAGGTTGGCGGCGACTACTCGTCGGCCGCATTT CTGTTTGCGGCGGCGGCACTCGCCGGGGAGATCGCCGTTTCCGGACTCGACCCGGCTGACCCTCAGGGCGATCAGGTTGT GATCTCCATCCTTGAAACATTCGGGGCAGGAGTAGTTCGTGATGGCGAAAACGTTACGATTCGAAAAGCAGCTTTGAAGG CTGCAGACATCGATCTTGCGAACGCTCCGGATCTGTTTCCCATTATCGCGGTCCTTGCGTCGCAGGCGAAAGGCACCAGC AGATTATACGGCGCCGCTCATCTCAGATTCAAGGAAAGCGACCGTATCATGTCCACGGTCCTTTTCCTCAGATCGATGGG TGCAGATATCAGCGAGACTGAGGATGGATGCATTGTTACGGGACCTGCCAATCTTTCCGGGGCAAATGTTACTACATTTG GCGACCACCGTATAATGATGGCATCAGCGGTTGCCGGGCTTATCGCAGATAGTACTACGACCGTAGATGATGCCGGCTGC TGCGCAGTTTCCTATCCGGGTTTTGTGAAAGATATGCAGAAACTCGGTGCGGATATGAGGGAAGAATGA
Upstream 100 bases:
>100_bases GCCACCGGGATCCTTGTGCCGGATGAAGGCCTTGACGAATTTCTCGATCGGTTCGGTCGGGAGAATGTTCTCCTCGCGAA CATCAGGAACGGTGTGTAAG
Downstream 100 bases:
>100_bases ATCGAATCGGAGAATCAATAACGCTCACGTTGTTTGGGGCGAGTCACGACAGTCGTATCGGCTGTGTTATAGACGGAATT CCTCCGGGCTATCCTGTAAA
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MKLIVSRSQISGCVHAPPSKSHTHRAFLLASLAKGESVVLSPLLGEDTLATLSAVKALGANVCEGDDRITIQGGNLHAPL PKGTVINCKNSGTSIRMLAGIASRLDGTTEFTGDASLCSRPMKPLLDALSELGAGVTSDNGCAPFTITGPVSGGDVHIRG DVSSQFISGLLISAPLGKADTRIHLTTPLTSKPYVDMTISAMKKHGVSVETIEDGYLVRSGQVYSSEDVQVGGDYSSAAF LFAAAALAGEIAVSGLDPADPQGDQVVISILETFGAGVVRDGENVTIRKAALKAADIDLANAPDLFPIIAVLASQAKGTS RLYGAAHLRFKESDRIMSTVLFLRSMGADISETEDGCIVTGPANLSGANVTTFGDHRIMMASAVAGLIADSTTTVDDAGC CAVSYPGFVKDMQKLGADMREE
Sequences:
>Translated_422_residues MKLIVSRSQISGCVHAPPSKSHTHRAFLLASLAKGESVVLSPLLGEDTLATLSAVKALGANVCEGDDRITIQGGNLHAPL PKGTVINCKNSGTSIRMLAGIASRLDGTTEFTGDASLCSRPMKPLLDALSELGAGVTSDNGCAPFTITGPVSGGDVHIRG DVSSQFISGLLISAPLGKADTRIHLTTPLTSKPYVDMTISAMKKHGVSVETIEDGYLVRSGQVYSSEDVQVGGDYSSAAF LFAAAALAGEIAVSGLDPADPQGDQVVISILETFGAGVVRDGENVTIRKAALKAADIDLANAPDLFPIIAVLASQAKGTS RLYGAAHLRFKESDRIMSTVLFLRSMGADISETEDGCIVTGPANLSGANVTTFGDHRIMMASAVAGLIADSTTTVDDAGC CAVSYPGFVKDMQKLGADMREE >Mature_422_residues MKLIVSRSQISGCVHAPPSKSHTHRAFLLASLAKGESVVLSPLLGEDTLATLSAVKALGANVCEGDDRITIQGGNLHAPL PKGTVINCKNSGTSIRMLAGIASRLDGTTEFTGDASLCSRPMKPLLDALSELGAGVTSDNGCAPFTITGPVSGGDVHIRG DVSSQFISGLLISAPLGKADTRIHLTTPLTSKPYVDMTISAMKKHGVSVETIEDGYLVRSGQVYSSEDVQVGGDYSSAAF LFAAAALAGEIAVSGLDPADPQGDQVVISILETFGAGVVRDGENVTIRKAALKAADIDLANAPDLFPIIAVLASQAKGTS RLYGAAHLRFKESDRIMSTVLFLRSMGADISETEDGCIVTGPANLSGANVTTFGDHRIMMASAVAGLIADSTTTVDDAGC CAVSYPGFVKDMQKLGADMREE
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=418, Percent_Identity=34.4497607655502, Blast_Score=208, Evalue=6e-55, Organism=Saccharomyces cerevisiae, GI6320332, Length=459, Percent_Identity=27.8867102396514, Blast_Score=128, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_METLZ (A2SU05)
Other databases:
- EMBL: CP000559 - RefSeq: YP_001031078.1 - ProteinModelPortal: A2SU05 - SMR: A2SU05 - STRING: A2SU05 - GeneID: 4795407 - GenomeReviews: CP000559_GR - KEGG: mla:Mlab_1650 - eggNOG: arNOG05032 - HOGENOM: HBG646626 - OMA: SSQFITS - PhylomeDB: A2SU05 - BioCyc: MLAB410358:MLAB_1650-MONOMER - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 43626; Mature: 43626
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIVSRSQISGCVHAPPSKSHTHRAFLLASLAKGESVVLSPLLGEDTLATLSAVKALGA CEEEEEHHHHCCCEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCC NVCEGDDRITIQGGNLHAPLPKGTVINCKNSGTSIRMLAGIASRLDGTTEFTGDASLCSR CCCCCCCEEEEECCCEECCCCCCCEEEECCCCCEEHHHHHHHHHCCCCCEECCCHHHHHC PMKPLLDALSELGAGVTSDNGCAPFTITGPVSGGDVHIRGDVSSQFISGLLISAPLGKAD CHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEECCCHHHHHHHEEEECCCCCCC TRIHLTTPLTSKPYVDMTISAMKKHGVSVETIEDGYLVRSGQVYSSEDVQVGGDYSSAAF CEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEECCCEECCCCCEECCCCCHHHH LFAAAALAGEIAVSGLDPADPQGDQVVISILETFGAGVVRDGENVTIRKAALKAADIDLA HHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHCCCEEECCCCEEEEHHHHHHHCCCCC NAPDLFPIIAVLASQAKGTSRLYGAAHLRFKESDRIMSTVLFLRSMGADISETEDGCIVT CCCCHHHHHHHHHHCCCCCHHEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEE GPANLSGANVTTFGDHRIMMASAVAGLIADSTTTVDDAGCCAVSYPGFVKDMQKLGADMR CCCCCCCCEEEEECCCEEHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCC EE CC >Mature Secondary Structure MKLIVSRSQISGCVHAPPSKSHTHRAFLLASLAKGESVVLSPLLGEDTLATLSAVKALGA CEEEEEHHHHCCCEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCC NVCEGDDRITIQGGNLHAPLPKGTVINCKNSGTSIRMLAGIASRLDGTTEFTGDASLCSR CCCCCCCEEEEECCCEECCCCCCCEEEECCCCCEEHHHHHHHHHCCCCCEECCCHHHHHC PMKPLLDALSELGAGVTSDNGCAPFTITGPVSGGDVHIRGDVSSQFISGLLISAPLGKAD CHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEECCCHHHHHHHEEEECCCCCCC TRIHLTTPLTSKPYVDMTISAMKKHGVSVETIEDGYLVRSGQVYSSEDVQVGGDYSSAAF CEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEECCCEECCCCCEECCCCCHHHH LFAAAALAGEIAVSGLDPADPQGDQVVISILETFGAGVVRDGENVTIRKAALKAADIDLA HHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHCCCEEECCCCEEEEHHHHHHHCCCCC NAPDLFPIIAVLASQAKGTSRLYGAAHLRFKESDRIMSTVLFLRSMGADISETEDGCIVT CCCCHHHHHHHHHHCCCCCHHEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEE GPANLSGANVTTFGDHRIMMASAVAGLIADSTTTVDDAGCCAVSYPGFVKDMQKLGADMR CCCCCCCCEEEEECCCEEHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCC EE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA