Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486446

Identifier: 124486446

GI number: 124486446

Start: 1660866

End: 1661528

Strand: Reverse

Name: 124486446

Synonym: Mlab_1634

Alternate gene names: NA

Gene position: 1661528-1660866 (Counterclockwise)

Preceding gene: 124486448

Following gene: 124486445

Centisome position: 92.05

GC content: 52.79

Gene sequence:

>663_bases
ATGTGTTGTTTTCCAGAACACAGATATTATAGGATTCGGAGCCAATGTTATATTCATCAGTCAATGGACATCTTTTCGCG
TTCGGCCTCCTCCTCCCGGGAATTTATCGAAGAGACGGTCACGGCTCTTCTTTCTGCCGAGTCGAACCAGGCCGCGGCCG
AGATCATCGGTCGGGCTCTCTCTGCCTACACGGTATTCGATCTCCAGTATATCGGCGGATATCTGAAGTGCGAAGCGGAA
CGCCTCCCCGATCCGTACCGTCGGTTGTATCGGCCGTACTGCATGGATCTCTTCGATCAGTATCATGCATTCATGCAGGA
TTTCAGGCCGGGTATTGTTTGTCATGGTCCGTTGCCCGATCTTGATCTCTGGAAAAAATACTGGACGGGTGTCCCCGAAT
ACTGTTTTCAGGATGCGGTTTCTTCACAGAGTCCAAGGCCGGTCCAGAACCACCCCTTGTCCAAATTCTTCTACCGTCTG
GTGTTTGCCTACGTCATGTTCGTAAAAGGGGGCTGCGGTCATCCGGTCGGCATGCCGTTTCCGGGAGGTTTTCGCATCCG
GCAGGCGGGCGACATCGTCTACTGCCCGATTCGTGATCGGGAAAAGGATCTCCCGCAGGCGTTATGTAATTACTGCCCGG
CAAAACAGGATCCCGATTTTTGA

Upstream 100 bases:

>100_bases
CTGGCCACGGTCTCGAAAGCGACAAGACCAATGATGACGACTACAGCGTAGAGAATGTCCATGAAAACTACACTGTAGTT
TGACGTATCGGGATATAAAC

Downstream 100 bases:

>100_bases
AATCCGAAGGCATTAAGAGAAATTCTTTTTACTAGCAGAACCTAAATTCAAGATACTTATGTTGGAAGAACTCATATCCA
CCATCGAATTTCAGATGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MCCFPEHRYYRIRSQCYIHQSMDIFSRSASSSREFIEETVTALLSAESNQAAAEIIGRALSAYTVFDLQYIGGYLKCEAE
RLPDPYRRLYRPYCMDLFDQYHAFMQDFRPGIVCHGPLPDLDLWKKYWTGVPEYCFQDAVSSQSPRPVQNHPLSKFFYRL
VFAYVMFVKGGCGHPVGMPFPGGFRIRQAGDIVYCPIRDREKDLPQALCNYCPAKQDPDF

Sequences:

>Translated_220_residues
MCCFPEHRYYRIRSQCYIHQSMDIFSRSASSSREFIEETVTALLSAESNQAAAEIIGRALSAYTVFDLQYIGGYLKCEAE
RLPDPYRRLYRPYCMDLFDQYHAFMQDFRPGIVCHGPLPDLDLWKKYWTGVPEYCFQDAVSSQSPRPVQNHPLSKFFYRL
VFAYVMFVKGGCGHPVGMPFPGGFRIRQAGDIVYCPIRDREKDLPQALCNYCPAKQDPDF
>Mature_220_residues
MCCFPEHRYYRIRSQCYIHQSMDIFSRSASSSREFIEETVTALLSAESNQAAAEIIGRALSAYTVFDLQYIGGYLKCEAE
RLPDPYRRLYRPYCMDLFDQYHAFMQDFRPGIVCHGPLPDLDLWKKYWTGVPEYCFQDAVSSQSPRPVQNHPLSKFFYRL
VFAYVMFVKGGCGHPVGMPFPGGFRIRQAGDIVYCPIRDREKDLPQALCNYCPAKQDPDF

Specific function: Unknown

COG id: COG4066

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0305 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019215
- InterPro:   IPR009182 [H]

Pfam domain/function: PF09888 DUF2115 [H]

EC number: NA

Molecular weight: Translated: 25500; Mature: 25500

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCCFPEHRYYRIRSQCYIHQSMDIFSRSASSSREFIEETVTALLSAESNQAAAEIIGRAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SAYTVFDLQYIGGYLKCEAERLPDPYRRLYRPYCMDLFDQYHAFMQDFRPGIVCHGPLPD
HHHHHHHHHHHCCHHEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC
LDLWKKYWTGVPEYCFQDAVSSQSPRPVQNHPLSKFFYRLVFAYVMFVKGGCGHPVGMPF
HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PGGFRIRQAGDIVYCPIRDREKDLPQALCNYCPAKQDPDF
CCCCEEEECCCEEECCCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MCCFPEHRYYRIRSQCYIHQSMDIFSRSASSSREFIEETVTALLSAESNQAAAEIIGRAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SAYTVFDLQYIGGYLKCEAERLPDPYRRLYRPYCMDLFDQYHAFMQDFRPGIVCHGPLPD
HHHHHHHHHHHCCHHEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC
LDLWKKYWTGVPEYCFQDAVSSQSPRPVQNHPLSKFFYRLVFAYVMFVKGGCGHPVGMPF
HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PGGFRIRQAGDIVYCPIRDREKDLPQALCNYCPAKQDPDF
CCCCEEEECCCEEECCCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]