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The map label for this gene is mtrC [H]

Identifier: 124486373

GI number: 124486373

Start: 1590929

End: 1591774

Strand: Reverse

Name: mtrC [H]

Synonym: Mlab_1558

Alternate gene names: 124486373

Gene position: 1591774-1590929 (Counterclockwise)

Preceding gene: 124486374

Following gene: 124486372

Centisome position: 88.19

GC content: 50.83

Gene sequence:

>846_bases
ATGTCAGTAAAAGTTGAAGCATCCCACGACGGAATTCCACATGACAAGGTCATGGTCATCGGAGCCGTTATTTCACTGGT
ATCCCTTTACATCGCTATCATTGGTACAGTCATCGGTGTTGACTATCTCGCATTCTTTGGTGGATTTGCAGCAGTCGGCG
CCCTGATCTGGGGTAACAGCACAATCAAAAAGCTCTGCAGCTATGGTATCGGAACTGGTGTTCCGTCTGCAGGTATGCTC
GCATTCGGATCCGGTGTCATTGCCCTTCTCTTTGCAGCTACCCTTGGCGGAATCAGCATCTGGATCGTACCGGTTGCAGG
ATTAATCATTGCTCTCATCGTCGGTCTCTTCCTTGGATGGATCTCAAACTCCGTTCTGAACATGAAGATCCCGGTGATGA
CCAGAAGTATCGCAGAACTCGCCGCAGTCGGCGCCCTTGCCCTTATGGGTCTTGGCGTTGTTGCAACCGGAACCGTTGGC
TTTACTGGAATCGCCACCATCGAGATCCTCGGTGTTACTGTTTACAATGCATCCTATCTTGGTGCAGGTGTTATTGCAGT
TTCATTCATGCTCGGTGCAATCGCTCTCCAGCACCCGTTCAACGCGTGCCTCGGTCCAGGCGAGAAACAGGACAGAACCA
ACATGCTCGCTATCGAATGCGGTTTCCTTTCCATGATCATCATGGCAGTGATTTCCTTCGTTTTCGTTTCATTAGCAGCA
GCTTGGATCTCACTTATCGTGGCCATCATTGGATGGTTCGTGTCCTATGTCAAATATCTCGCCTTATCCAAGCGCGATGC
AGCAGCCTGGCTTGATGCCAAGCCGTTCTCCGACGCGGAGGAGTAA

Upstream 100 bases:

>100_bases
TTCAAGCGTTTCCCCCGTGCAATCGTCGCCGCAATCTTAGCTTCAGCTGTGTGCGGTCTTGTTGCAATGCTGGTGGTGGC
ATTATTCTGAGGTGTAAAAA

Downstream 100 bases:

>100_bases
GTTAGGAGGAAACAAAAATGGGATATGTATTAGTATTACCGGAATTTGGCCTCGTAGCTGACCCCATAGCAGGTATCGTA
ACGACTGCCGGTGTATCCTA

Product: tetrahydromethanopterin S-methyltransferase subunit C

Products: NA

Alternate protein names: N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit C [H]

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSVKVEASHDGIPHDKVMVIGAVISLVSLYIAIIGTVIGVDYLAFFGGFAAVGALIWGNSTIKKLCSYGIGTGVPSAGML
AFGSGVIALLFAATLGGISIWIVPVAGLIIALIVGLFLGWISNSVLNMKIPVMTRSIAELAAVGALALMGLGVVATGTVG
FTGIATIEILGVTVYNASYLGAGVIAVSFMLGAIALQHPFNACLGPGEKQDRTNMLAIECGFLSMIIMAVISFVFVSLAA
AWISLIVAIIGWFVSYVKYLALSKRDAAAWLDAKPFSDAEE

Sequences:

>Translated_281_residues
MSVKVEASHDGIPHDKVMVIGAVISLVSLYIAIIGTVIGVDYLAFFGGFAAVGALIWGNSTIKKLCSYGIGTGVPSAGML
AFGSGVIALLFAATLGGISIWIVPVAGLIIALIVGLFLGWISNSVLNMKIPVMTRSIAELAAVGALALMGLGVVATGTVG
FTGIATIEILGVTVYNASYLGAGVIAVSFMLGAIALQHPFNACLGPGEKQDRTNMLAIECGFLSMIIMAVISFVFVSLAA
AWISLIVAIIGWFVSYVKYLALSKRDAAAWLDAKPFSDAEE
>Mature_280_residues
SVKVEASHDGIPHDKVMVIGAVISLVSLYIAIIGTVIGVDYLAFFGGFAAVGALIWGNSTIKKLCSYGIGTGVPSAGMLA
FGSGVIALLFAATLGGISIWIVPVAGLIIALIVGLFLGWISNSVLNMKIPVMTRSIAELAAVGALALMGLGVVATGTVGF
TGIATIEILGVTVYNASYLGAGVIAVSFMLGAIALQHPFNACLGPGEKQDRTNMLAIECGFLSMIIMAVISFVFVSLAAA
WISLIVAIIGWFVSYVKYLALSKRDAAAWLDAKPFSDAEE

Specific function: Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step [H]

COG id: COG4061

COG function: function code H; Tetrahydromethanopterin S-methyltransferase, subunit C

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mtrC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005865
- ProDom:   PD013899 [H]

Pfam domain/function: PF04211 MtrC [H]

EC number: =2.1.1.86 [H]

Molecular weight: Translated: 29022; Mature: 28891

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKVEASHDGIPHDKVMVIGAVISLVSLYIAIIGTVIGVDYLAFFGGFAAVGALIWGNS
CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
TIKKLCSYGIGTGVPSAGMLAFGSGVIALLFAATLGGISIWIVPVAGLIIALIVGLFLGW
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ISNSVLNMKIPVMTRSIAELAAVGALALMGLGVVATGTVGFTGIATIEILGVTVYNASYL
HCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCHHH
GAGVIAVSFMLGAIALQHPFNACLGPGEKQDRTNMLAIECGFLSMIIMAVISFVFVSLAA
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
AWISLIVAIIGWFVSYVKYLALSKRDAAAWLDAKPFSDAEE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SVKVEASHDGIPHDKVMVIGAVISLVSLYIAIIGTVIGVDYLAFFGGFAAVGALIWGNS
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
TIKKLCSYGIGTGVPSAGMLAFGSGVIALLFAATLGGISIWIVPVAGLIIALIVGLFLGW
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ISNSVLNMKIPVMTRSIAELAAVGALALMGLGVVATGTVGFTGIATIEILGVTVYNASYL
HCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCHHH
GAGVIAVSFMLGAIALQHPFNACLGPGEKQDRTNMLAIECGFLSMIIMAVISFVFVSLAA
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
AWISLIVAIIGWFVSYVKYLALSKRDAAAWLDAKPFSDAEE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9559648; 12125824 [H]