Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486341

Identifier: 124486341

GI number: 124486341

Start: 1558951

End: 1559499

Strand: Reverse

Name: 124486341

Synonym: Mlab_1526

Alternate gene names: NA

Gene position: 1559499-1558951 (Counterclockwise)

Preceding gene: 124486343

Following gene: 124486339

Centisome position: 86.4

GC content: 50.27

Gene sequence:

>549_bases
GTGCAGCCATATAACGCCAACCCAATTTGTGACAATATAATCATGATGAATACCCCCATTCAGGATAACGAAACTGTCCT
GCAGCAGATCCTCTCCTCATGCGAGGCTTCCCGTCTGCTTGAAACAAAGCAGTTTATGCAGCACGGTGACACGAACGTTT
ATGAGCACTGCATCGCTGTGGCGCGGGTCAGTTGTCTGCTTGCGGATAAGATGGGCTTATCGGTTGATCGGGAATCCCTT
ATCCGGGGTGCCCTGCTTCACGATTATTTCTTTTATGACTGGCATGTTCCGGATCCCGGGCACCGCCTGCATGGATTCAC
CCATCCCAAGCGTGCTTTGCAGAATGCGATGGATGATTTTGCCTTGACCACGGTCGAACAGGATATGATTCTTCGCCATA
TGTTTCCTTTGACGCCGACTCCTCCAAGGTTCCGGGAGGGCTGGCTCCTGTGTCTTGCGGATAAATTCTGTTCGACTTTG
GAAACAGCACGGTTTACCCAAAATTCGTTTGTAAGAGGATTTTATGCGAGCGAGGGTGAGATGCAGTGA

Upstream 100 bases:

>100_bases
AGTCGAGCTGATTCTGCTTGGGCCGATCATCGACTCGTTGTAGAGACGCAGACCAAGTTTTTCTCCTCGGGCCTCTAATA
CTAGAGGAACAAGAATCATT

Downstream 100 bases:

>100_bases
TCCAGGTCAAGGATTTACTGTACCAAACAAATCCTTCCTATTCCTCAACGATTTTCTGAATAAGTCTCGTAACGCTTGGC
TTTTTCTGCCTCTTCACTCG

Product: hypothetical protein

Products: NA

Alternate protein names: HD Superfamily Hydrolase; Metal-Dependent Phosphohydrolase; HD Domain-Containing Protein; HD Family Hydrolase; Hydrolase; HD Superfamily Metal-Dependent Phosphohydrolase; Hydrolase Of HAD Superfamily; Phosphohydrolase; Domain HDIG Containing Protein; HD Domain Protein

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MQPYNANPICDNIIMMNTPIQDNETVLQQILSSCEASRLLETKQFMQHGDTNVYEHCIAVARVSCLLADKMGLSVDRESL
IRGALLHDYFFYDWHVPDPGHRLHGFTHPKRALQNAMDDFALTTVEQDMILRHMFPLTPTPPRFREGWLLCLADKFCSTL
ETARFTQNSFVRGFYASEGEMQ

Sequences:

>Translated_182_residues
MQPYNANPICDNIIMMNTPIQDNETVLQQILSSCEASRLLETKQFMQHGDTNVYEHCIAVARVSCLLADKMGLSVDRESL
IRGALLHDYFFYDWHVPDPGHRLHGFTHPKRALQNAMDDFALTTVEQDMILRHMFPLTPTPPRFREGWLLCLADKFCSTL
ETARFTQNSFVRGFYASEGEMQ
>Mature_182_residues
MQPYNANPICDNIIMMNTPIQDNETVLQQILSSCEASRLLETKQFMQHGDTNVYEHCIAVARVSCLLADKMGLSVDRESL
IRGALLHDYFFYDWHVPDPGHRLHGFTHPKRALQNAMDDFALTTVEQDMILRHMFPLTPTPPRFREGWLLCLADKFCSTL
ETARFTQNSFVRGFYASEGEMQ

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20945; Mature: 20945

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPYNANPICDNIIMMNTPIQDNETVLQQILSSCEASRLLETKQFMQHGDTNVYEHCIAV
CCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ARVSCLLADKMGLSVDRESLIRGALLHDYFFYDWHVPDPGHRLHGFTHPKRALQNAMDDF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
ALTTVEQDMILRHMFPLTPTPPRFREGWLLCLADKFCSTLETARFTQNSFVRGFYASEGE
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
MQ
CC
>Mature Secondary Structure
MQPYNANPICDNIIMMNTPIQDNETVLQQILSSCEASRLLETKQFMQHGDTNVYEHCIAV
CCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ARVSCLLADKMGLSVDRESLIRGALLHDYFFYDWHVPDPGHRLHGFTHPKRALQNAMDDF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
ALTTVEQDMILRHMFPLTPTPPRFREGWLLCLADKFCSTLETARFTQNSFVRGFYASEGE
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
MQ
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA