| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486341
Identifier: 124486341
GI number: 124486341
Start: 1558951
End: 1559499
Strand: Reverse
Name: 124486341
Synonym: Mlab_1526
Alternate gene names: NA
Gene position: 1559499-1558951 (Counterclockwise)
Preceding gene: 124486343
Following gene: 124486339
Centisome position: 86.4
GC content: 50.27
Gene sequence:
>549_bases GTGCAGCCATATAACGCCAACCCAATTTGTGACAATATAATCATGATGAATACCCCCATTCAGGATAACGAAACTGTCCT GCAGCAGATCCTCTCCTCATGCGAGGCTTCCCGTCTGCTTGAAACAAAGCAGTTTATGCAGCACGGTGACACGAACGTTT ATGAGCACTGCATCGCTGTGGCGCGGGTCAGTTGTCTGCTTGCGGATAAGATGGGCTTATCGGTTGATCGGGAATCCCTT ATCCGGGGTGCCCTGCTTCACGATTATTTCTTTTATGACTGGCATGTTCCGGATCCCGGGCACCGCCTGCATGGATTCAC CCATCCCAAGCGTGCTTTGCAGAATGCGATGGATGATTTTGCCTTGACCACGGTCGAACAGGATATGATTCTTCGCCATA TGTTTCCTTTGACGCCGACTCCTCCAAGGTTCCGGGAGGGCTGGCTCCTGTGTCTTGCGGATAAATTCTGTTCGACTTTG GAAACAGCACGGTTTACCCAAAATTCGTTTGTAAGAGGATTTTATGCGAGCGAGGGTGAGATGCAGTGA
Upstream 100 bases:
>100_bases AGTCGAGCTGATTCTGCTTGGGCCGATCATCGACTCGTTGTAGAGACGCAGACCAAGTTTTTCTCCTCGGGCCTCTAATA CTAGAGGAACAAGAATCATT
Downstream 100 bases:
>100_bases TCCAGGTCAAGGATTTACTGTACCAAACAAATCCTTCCTATTCCTCAACGATTTTCTGAATAAGTCTCGTAACGCTTGGC TTTTTCTGCCTCTTCACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: HD Superfamily Hydrolase; Metal-Dependent Phosphohydrolase; HD Domain-Containing Protein; HD Family Hydrolase; Hydrolase; HD Superfamily Metal-Dependent Phosphohydrolase; Hydrolase Of HAD Superfamily; Phosphohydrolase; Domain HDIG Containing Protein; HD Domain Protein
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MQPYNANPICDNIIMMNTPIQDNETVLQQILSSCEASRLLETKQFMQHGDTNVYEHCIAVARVSCLLADKMGLSVDRESL IRGALLHDYFFYDWHVPDPGHRLHGFTHPKRALQNAMDDFALTTVEQDMILRHMFPLTPTPPRFREGWLLCLADKFCSTL ETARFTQNSFVRGFYASEGEMQ
Sequences:
>Translated_182_residues MQPYNANPICDNIIMMNTPIQDNETVLQQILSSCEASRLLETKQFMQHGDTNVYEHCIAVARVSCLLADKMGLSVDRESL IRGALLHDYFFYDWHVPDPGHRLHGFTHPKRALQNAMDDFALTTVEQDMILRHMFPLTPTPPRFREGWLLCLADKFCSTL ETARFTQNSFVRGFYASEGEMQ >Mature_182_residues MQPYNANPICDNIIMMNTPIQDNETVLQQILSSCEASRLLETKQFMQHGDTNVYEHCIAVARVSCLLADKMGLSVDRESL IRGALLHDYFFYDWHVPDPGHRLHGFTHPKRALQNAMDDFALTTVEQDMILRHMFPLTPTPPRFREGWLLCLADKFCSTL ETARFTQNSFVRGFYASEGEMQ
Specific function: Unknown
COG id: COG1418
COG function: function code R; Predicted HD superfamily hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20945; Mature: 20945
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPYNANPICDNIIMMNTPIQDNETVLQQILSSCEASRLLETKQFMQHGDTNVYEHCIAV CCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ARVSCLLADKMGLSVDRESLIRGALLHDYFFYDWHVPDPGHRLHGFTHPKRALQNAMDDF HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHH ALTTVEQDMILRHMFPLTPTPPRFREGWLLCLADKFCSTLETARFTQNSFVRGFYASEGE HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC MQ CC >Mature Secondary Structure MQPYNANPICDNIIMMNTPIQDNETVLQQILSSCEASRLLETKQFMQHGDTNVYEHCIAV CCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ARVSCLLADKMGLSVDRESLIRGALLHDYFFYDWHVPDPGHRLHGFTHPKRALQNAMDDF HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHH ALTTVEQDMILRHMFPLTPTPPRFREGWLLCLADKFCSTLETARFTQNSFVRGFYASEGE HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC MQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA