| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
Click here to switch to the map view.
The map label for this gene is ftsZ3 [H]
Identifier: 124486306
GI number: 124486306
Start: 1525257
End: 1526450
Strand: Reverse
Name: ftsZ3 [H]
Synonym: Mlab_1491
Alternate gene names: 124486306
Gene position: 1526450-1525257 (Counterclockwise)
Preceding gene: 124486316
Following gene: 124486305
Centisome position: 84.57
GC content: 51.84
Gene sequence:
>1194_bases ATGCGAGTGTTTTTTATAGGATTTGGACAGGCAGGAGGAAAGATCGTGGATATGTTCCTGGCACAGGACAAAAAGTTAGG ATCCACGAGTTTCCGCGGTGTTGTAATTAACACTGCCCGAACCGACCTGATGGGTGTGAAGCACATCCCGATGGAGGATC GTCTCCTGATTGGCCAGACAATGGTCAAAGGTCACGGTGTTGGAACCGATAACGTGACCGGTGCCAAAGTGGCAGCAGAT GAGATTGATACGATTATCAACGCGATCGACAAACGCGGAACTCACGATGTTGATGCATTCGTTGTTTGTGCCGGATTGGG CGGTGGAACTGGTTCTGGTGGTGCTCCGGTTCTCTGCCGTCATTTAAAGCGTATTTACCGCGAACCGGTGTATGCACTTG GCATTATTCCAGCTCCAGAAGAGGGGCGTCTTTACTCTTTAAATGCTGCCCGAAGTTTATCCACACTGGTCAATGAGGCC GACAATGTCATAGTCTTTGACAACAGCGCGTGGAAGAATGACGGTGAGAGTGTGAAAAGCGCTTTTGACCGGCTGAATGA GGAGATTGTCCGCAGGTTCGGTGTCCTGTTCCGTGCCGGCGAGGTGAATAAATATGGTGTAGGAGAGATGGTTGTCGACT CCAGTGAGATTATCAACACGCTTCGCGGCGGCGGCATCTCTTCAGTTGGGTATGCGATCAGTGAAGCTCTTCCAAAAGGC GGTCGGCCTGCATCAAAGTCAGGCGGCGGTCTCTTGGGAGGACTTCTCGGGAAGAAAGAGAAGAAACAGGAACCCCATAT CGATATCACGTCCAGCGAGGATAAATCAGCGAAAATTATCGGTCTCGTCCGTCGTGCCATGCTTGGCCGTCTGACGCTTC CCTGTGATTACTCGACTGCTGAGCGTGCTCTTGTTCTTGTTGCCGGTCCGCCGACGGAGCTTGACCGTAAAGGTGTGGAA AAATCGAAGAGCTGGGTCGAAGAAAATATCGCCGGTGTCGAGGTTCGTGGTGGTGACTACCCTGTTGACAGCGGATATGT TGCGGCTGTCGTTCTGCTTGCAACGATCGGCAATGCGCCCCGTATCCGTGAACTCATGGAACTTGCAAAGGAAGCAAAAG AAGAGGTCGTGAGATCTCGTGAACGGGCGACGTCATCCATGTTTGAGGATGGGATCGATCCCTTATTCGAGTGA
Upstream 100 bases:
>100_bases GTATGATAAGAAAGTTTTTGGCAGACGTCGTCGTATAGTATGGAAGTCATATATATTCCATGACTTACATATATACCACA ACTAAAGGTGTCTACAGTAA
Downstream 100 bases:
>100_bases GGATATTATGAAGAAAATCACGTATGTATTACTGGCACTTCTGGTCTGTGCAACGTTTATCGGCGCAGGATCAGCATTTA CGTATACGAGCGGAGCGGTT
Product: AIR synthase related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MRVFFIGFGQAGGKIVDMFLAQDKKLGSTSFRGVVINTARTDLMGVKHIPMEDRLLIGQTMVKGHGVGTDNVTGAKVAAD EIDTIINAIDKRGTHDVDAFVVCAGLGGGTGSGGAPVLCRHLKRIYREPVYALGIIPAPEEGRLYSLNAARSLSTLVNEA DNVIVFDNSAWKNDGESVKSAFDRLNEEIVRRFGVLFRAGEVNKYGVGEMVVDSSEIINTLRGGGISSVGYAISEALPKG GRPASKSGGGLLGGLLGKKEKKQEPHIDITSSEDKSAKIIGLVRRAMLGRLTLPCDYSTAERALVLVAGPPTELDRKGVE KSKSWVEENIAGVEVRGGDYPVDSGYVAAVVLLATIGNAPRIRELMELAKEAKEEVVRSRERATSSMFEDGIDPLFE
Sequences:
>Translated_397_residues MRVFFIGFGQAGGKIVDMFLAQDKKLGSTSFRGVVINTARTDLMGVKHIPMEDRLLIGQTMVKGHGVGTDNVTGAKVAAD EIDTIINAIDKRGTHDVDAFVVCAGLGGGTGSGGAPVLCRHLKRIYREPVYALGIIPAPEEGRLYSLNAARSLSTLVNEA DNVIVFDNSAWKNDGESVKSAFDRLNEEIVRRFGVLFRAGEVNKYGVGEMVVDSSEIINTLRGGGISSVGYAISEALPKG GRPASKSGGGLLGGLLGKKEKKQEPHIDITSSEDKSAKIIGLVRRAMLGRLTLPCDYSTAERALVLVAGPPTELDRKGVE KSKSWVEENIAGVEVRGGDYPVDSGYVAAVVLLATIGNAPRIRELMELAKEAKEEVVRSRERATSSMFEDGIDPLFE >Mature_397_residues MRVFFIGFGQAGGKIVDMFLAQDKKLGSTSFRGVVINTARTDLMGVKHIPMEDRLLIGQTMVKGHGVGTDNVTGAKVAAD EIDTIINAIDKRGTHDVDAFVVCAGLGGGTGSGGAPVLCRHLKRIYREPVYALGIIPAPEEGRLYSLNAARSLSTLVNEA DNVIVFDNSAWKNDGESVKSAFDRLNEEIVRRFGVLFRAGEVNKYGVGEMVVDSSEIINTLRGGGISSVGYAISEALPKG GRPASKSGGGLLGGLLGKKEKKQEPHIDITSSEDKSAKIIGLVRRAMLGRLTLPCDYSTAERALVLVAGPPTELDRKGVE KSKSWVEENIAGVEVRGGDYPVDSGYVAAVVLLATIGNAPRIRELMELAKEAKEEVVRSRERATSSMFEDGIDPLFE
Specific function: Unknown
COG id: COG0206
COG function: function code D; Cell division GTPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000158 - InterPro: IPR000217 - InterPro: IPR017975 - InterPro: IPR003008 [H]
Pfam domain/function: PF00091 Tubulin [H]
EC number: NA
Molecular weight: Translated: 42446; Mature: 42446
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00227 TUBULIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVFFIGFGQAGGKIVDMFLAQDKKLGSTSFRGVVINTARTDLMGVKHIPMEDRLLIGQT CEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCCEEHHHH MVKGHGVGTDNVTGAKVAADEIDTIINAIDKRGTHDVDAFVVCAGLGGGTGSGGAPVLCR HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHH HLKRIYREPVYALGIIPAPEEGRLYSLNAARSLSTLVNEADNVIVFDNSAWKNDGESVKS HHHHHHHCCCEEEEECCCCCCCCEEECHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHH AFDRLNEEIVRRFGVLFRAGEVNKYGVGEMVVDSSEIINTLRGGGISSVGYAISEALPKG HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEECHHHHHHHHCCCCCHHHHHHHHHHCCCC GRPASKSGGGLLGGLLGKKEKKQEPHIDITSSEDKSAKIIGLVRRAMLGRLTLPCDYSTA CCCCCCCCCCHHHHHHCCCHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCC ERALVLVAGPPTELDRKGVEKSKSWVEENIAGVEVRGGDYPVDSGYVAAVVLLATIGNAP CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCH RIRELMELAKEAKEEVVRSRERATSSMFEDGIDPLFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC >Mature Secondary Structure MRVFFIGFGQAGGKIVDMFLAQDKKLGSTSFRGVVINTARTDLMGVKHIPMEDRLLIGQT CEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCCEEHHHH MVKGHGVGTDNVTGAKVAADEIDTIINAIDKRGTHDVDAFVVCAGLGGGTGSGGAPVLCR HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHH HLKRIYREPVYALGIIPAPEEGRLYSLNAARSLSTLVNEADNVIVFDNSAWKNDGESVKS HHHHHHHCCCEEEEECCCCCCCCEEECHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHH AFDRLNEEIVRRFGVLFRAGEVNKYGVGEMVVDSSEIINTLRGGGISSVGYAISEALPKG HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEECHHHHHHHHCCCCCHHHHHHHHHHCCCC GRPASKSGGGLLGGLLGKKEKKQEPHIDITSSEDKSAKIIGLVRRAMLGRLTLPCDYSTA CCCCCCCCCCHHHHHHCCCHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCC ERALVLVAGPPTELDRKGVEKSKSWVEENIAGVEVRGGDYPVDSGYVAAVVLLATIGNAP CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCH RIRELMELAKEAKEEVVRSRERATSSMFEDGIDPLFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA