| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486305
Identifier: 124486305
GI number: 124486305
Start: 1524143
End: 1525249
Strand: Reverse
Name: 124486305
Synonym: Mlab_1490
Alternate gene names: NA
Gene position: 1525249-1524143 (Counterclockwise)
Preceding gene: 124486306
Following gene: 124486303
Centisome position: 84.5
GC content: 46.43
Gene sequence:
>1107_bases ATGAAGAAAATCACGTATGTATTACTGGCACTTCTGGTCTGTGCAACGTTTATCGGCGCAGGATCAGCATTTACGTATAC GAGCGGAGCGGTTGTTGATCCATCGGGTTCCTTAAGTCCCGGCGAGGCTGTGACAGCTTCGATGACCATTGGTCTTCCAA AGGACAGTATCAGCACATCGGGCTCTCTGAAATTGACTACTGCCCTTCGTGACTCAACTCTGTGGACCGTGTATGTGTAT AAAGGCACGGTTGTAAATAACCAGACGAGTGAAGATGCTCTTATCACAACTTTCTCCTCCACCAGCTTCGCCTATACAAT TTCGGGTTTTGTTCTGGATTATGATCAGCCGGTTACTCTGTATATTGCCCTGAGTGGTCTGGTTCCGGACAGTTTGAAAG GTCAGTCTGTTACGATTCTTAAAATCGATGAAAACTCAGGTTCGGCAACCGCGAGCGGGTATTCAACCTACTCTTCACCA TCTCAGAATGTTTATAATCCGGATGATTTTTCCGGAATGGTGACTTCAACTGAAACGGATATTGCATCTCTTGATTCACG CATCTCGACCTATACCGCGTATGGAATCGATGTGTCCTCCGTAGTTACGAATCTGGAATCCGCCAAAACCTCTCTTGCGG CAGCAAAAGCAGCAGGCACTGCCGATATCGCTCTTGCTAATAAAAAACTGGAAGCAGCAACGACCTCATTAAATGCTGCT GAAAAAGCGCTCTCTCTCGCTGGTTTGAATGCCATCAAAGCAAATACGGATGCTGTCGATCTTATAGTTACCGAGCTTTA CGGGAAGGGCTGGGATACCGAGGCAAAACTTCTTGCAACAACCAATCAGGGCATCAAAAATACCTATGATGTAGCTGCAA TTTCATATAATGCAGGCGGCACTCCTGATGTCGATGAAAACCTTAAAGCCTCGGAACAGGCAGTAGCTGATGGAAATGCT TATCTGGAAAAGGCCTCTGCCTCACCTCTTGCTGCCATCGGCAATATATTACCGATCATCATTGTGATCGTTGTTGCGGT AGTTGTTGTATTCGGTGCAATTATCTTCATTAGAAGACGGAGAGGCGGCTGGGACGAACTTGGATAA
Upstream 100 bases:
>100_bases CTTGCAAAGGAAGCAAAAGAAGAGGTCGTGAGATCTCGTGAACGGGCGACGTCATCCATGTTTGAGGATGGGATCGATCC CTTATTCGAGTGAGGATATT
Downstream 100 bases:
>100_bases CTGATTATCATGTGTGAGGAGTCCTTCTCCTCAATGGCACCTTTTTTGAAAAAAATAGTATGATAAGAGTTAGTGGAAAA GTTCGTCCATATACTCTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MKKITYVLLALLVCATFIGAGSAFTYTSGAVVDPSGSLSPGEAVTASMTIGLPKDSISTSGSLKLTTALRDSTLWTVYVY KGTVVNNQTSEDALITTFSSTSFAYTISGFVLDYDQPVTLYIALSGLVPDSLKGQSVTILKIDENSGSATASGYSTYSSP SQNVYNPDDFSGMVTSTETDIASLDSRISTYTAYGIDVSSVVTNLESAKTSLAAAKAAGTADIALANKKLEAATTSLNAA EKALSLAGLNAIKANTDAVDLIVTELYGKGWDTEAKLLATTNQGIKNTYDVAAISYNAGGTPDVDENLKASEQAVADGNA YLEKASASPLAAIGNILPIIIVIVVAVVVVFGAIIFIRRRRGGWDELG
Sequences:
>Translated_368_residues MKKITYVLLALLVCATFIGAGSAFTYTSGAVVDPSGSLSPGEAVTASMTIGLPKDSISTSGSLKLTTALRDSTLWTVYVY KGTVVNNQTSEDALITTFSSTSFAYTISGFVLDYDQPVTLYIALSGLVPDSLKGQSVTILKIDENSGSATASGYSTYSSP SQNVYNPDDFSGMVTSTETDIASLDSRISTYTAYGIDVSSVVTNLESAKTSLAAAKAAGTADIALANKKLEAATTSLNAA EKALSLAGLNAIKANTDAVDLIVTELYGKGWDTEAKLLATTNQGIKNTYDVAAISYNAGGTPDVDENLKASEQAVADGNA YLEKASASPLAAIGNILPIIIVIVVAVVVVFGAIIFIRRRRGGWDELG >Mature_368_residues MKKITYVLLALLVCATFIGAGSAFTYTSGAVVDPSGSLSPGEAVTASMTIGLPKDSISTSGSLKLTTALRDSTLWTVYVY KGTVVNNQTSEDALITTFSSTSFAYTISGFVLDYDQPVTLYIALSGLVPDSLKGQSVTILKIDENSGSATASGYSTYSSP SQNVYNPDDFSGMVTSTETDIASLDSRISTYTAYGIDVSSVVTNLESAKTSLAAAKAAGTADIALANKKLEAATTSLNAA EKALSLAGLNAIKANTDAVDLIVTELYGKGWDTEAKLLATTNQGIKNTYDVAAISYNAGGTPDVDENLKASEQAVADGNA YLEKASASPLAAIGNILPIIIVIVVAVVVVFGAIIFIRRRRGGWDELG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38180; Mature: 38180
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKITYVLLALLVCATFIGAGSAFTYTSGAVVDPSGSLSPGEAVTASMTIGLPKDSISTS CCHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCC GSLKLTTALRDSTLWTVYVYKGTVVNNQTSEDALITTFSSTSFAYTISGFVLDYDQPVTL CCEEEEEEECCCEEEEEEEEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEEECCCCEEE YIALSGLVPDSLKGQSVTILKIDENSGSATASGYSTYSSPSQNVYNPDDFSGMVTSTETD EEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHH IASLDSRISTYTAYGIDVSSVVTNLESAKTSLAAAKAAGTADIALANKKLEAATTSLNAA HHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH EKALSLAGLNAIKANTDAVDLIVTELYGKGWDTEAKLLATTNQGIKNTYDVAAISYNAGG HHHHHHHCCHHEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCC TPDVDENLKASEQAVADGNAYLEKASASPLAAIGNILPIIIVIVVAVVVVFGAIIFIRRR CCCCCCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RGGWDELG CCCCCCCC >Mature Secondary Structure MKKITYVLLALLVCATFIGAGSAFTYTSGAVVDPSGSLSPGEAVTASMTIGLPKDSISTS CCHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCC GSLKLTTALRDSTLWTVYVYKGTVVNNQTSEDALITTFSSTSFAYTISGFVLDYDQPVTL CCEEEEEEECCCEEEEEEEEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEEECCCCEEE YIALSGLVPDSLKGQSVTILKIDENSGSATASGYSTYSSPSQNVYNPDDFSGMVTSTETD EEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHH IASLDSRISTYTAYGIDVSSVVTNLESAKTSLAAAKAAGTADIALANKKLEAATTSLNAA HHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH EKALSLAGLNAIKANTDAVDLIVTELYGKGWDTEAKLLATTNQGIKNTYDVAAISYNAGG HHHHHHHCCHHEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCC TPDVDENLKASEQAVADGNAYLEKASASPLAAIGNILPIIIVIVVAVVVVFGAIIFIRRR CCCCCCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RGGWDELG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA