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The map label for this gene is rps19e [H]

Identifier: 124486299

GI number: 124486299

Start: 1519418

End: 1519867

Strand: Reverse

Name: rps19e [H]

Synonym: Mlab_1483

Alternate gene names: 124486299

Gene position: 1519867-1519418 (Counterclockwise)

Preceding gene: 124486300

Following gene: 124486298

Centisome position: 84.2

GC content: 52.0

Gene sequence:

>450_bases
ATGACTACAGTGTTTGATATTCCGGCAGACTTACTCATCGCAAAGGTAGCAGACGAACTCAAGAACGAGTCCGTTATTAA
AGCACCCGAGTGGGCAGAGTATGTCAAGACGGGAGTACACAAGGAGATGCCGCCGGAAAATCCAGACTGGTGGTATGTTC
GTTCCGCAGCAGTGCTGCGTAGAATTTACGTTGACGGCCCAATTGGAGTTGAGCGTATGCGCTCTGTTTACGGCGGTCTG
CAGGACCGCGGTTCCAAGCCGTCCCACTTTAGAAAAGGCAGTGGAAGCATTGCCAGAAAAGTCATGCAGCAGCTCGAAGA
AGCCGGCTACCTCGAAAAGGTTACCGGTGGTCGCAGTGTTTCTGCAAAAGGCCGCAAATTCCTCGACAACATCGCCTACT
CCATTAAGGATCAGGCAGTCGAGACTGCGCCCGGACTCGCAAAGTATTAA

Upstream 100 bases:

>100_bases
TATCTTCTGACTCTAATTTATACAGACTGTTAATGTCATCAATCACGGAAATGTTCCGTGAAGCATGTCTCCAACATGCG
GCATACAGTGAGGATTGTCA

Downstream 100 bases:

>100_bases
AAATAATTACTGACCAATTGAAGGTGATTCAAGAATGGGAGACGATGAACTCGCAGAGATCCGCCGTCAGCGTATGATGC
AGATGCAGCAGCAGCAGATG

Product: 30S ribosomal protein S19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTTVFDIPADLLIAKVADELKNESVIKAPEWAEYVKTGVHKEMPPENPDWWYVRSAAVLRRIYVDGPIGVERMRSVYGGL
QDRGSKPSHFRKGSGSIARKVMQQLEEAGYLEKVTGGRSVSAKGRKFLDNIAYSIKDQAVETAPGLAKY

Sequences:

>Translated_149_residues
MTTVFDIPADLLIAKVADELKNESVIKAPEWAEYVKTGVHKEMPPENPDWWYVRSAAVLRRIYVDGPIGVERMRSVYGGL
QDRGSKPSHFRKGSGSIARKVMQQLEEAGYLEKVTGGRSVSAKGRKFLDNIAYSIKDQAVETAPGLAKY
>Mature_148_residues
TTVFDIPADLLIAKVADELKNESVIKAPEWAEYVKTGVHKEMPPENPDWWYVRSAAVLRRIYVDGPIGVERMRSVYGGLQ
DRGSKPSHFRKGSGSIARKVMQQLEEAGYLEKVTGGRSVSAKGRKFLDNIAYSIKDQAVETAPGLAKY

Specific function: Unknown

COG id: COG2238

COG function: function code J; Ribosomal protein S19E (S16A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S19e family [H]

Homologues:

Organism=Homo sapiens, GI4506695, Length=134, Percent_Identity=40.2985074626866, Blast_Score=105, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17508697, Length=137, Percent_Identity=40.1459854014599, Blast_Score=107, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6324027, Length=133, Percent_Identity=38.3458646616541, Blast_Score=92, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6324451, Length=133, Percent_Identity=38.3458646616541, Blast_Score=92, Evalue=4e-20,
Organism=Drosophila melanogaster, GI17647891, Length=148, Percent_Identity=40.5405405405405, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24642576, Length=148, Percent_Identity=40.5405405405405, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24642574, Length=148, Percent_Identity=40.5405405405405, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24649452, Length=135, Percent_Identity=40, Blast_Score=92, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001266
- InterPro:   IPR018277
- InterPro:   IPR011991
- ProDom:   PD003854 [H]

Pfam domain/function: PF01090 Ribosomal_S19e [H]

EC number: NA

Molecular weight: Translated: 16585; Mature: 16454

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVFDIPADLLIAKVADELKNESVIKAPEWAEYVKTGVHKEMPPENPDWWYVRSAAVLR
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHH
RIYVDGPIGVERMRSVYGGLQDRGSKPSHFRKGSGSIARKVMQQLEEAGYLEKVTGGRSV
HHHCCCCCCHHHHHHHHCCHHHCCCCCCHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCC
SAKGRKFLDNIAYSIKDQAVETAPGLAKY
CHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTVFDIPADLLIAKVADELKNESVIKAPEWAEYVKTGVHKEMPPENPDWWYVRSAAVLR
CCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHH
RIYVDGPIGVERMRSVYGGLQDRGSKPSHFRKGSGSIARKVMQQLEEAGYLEKVTGGRSV
HHHCCCCCCHHHHHHHHCCHHHCCCCCCHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCC
SAKGRKFLDNIAYSIKDQAVETAPGLAKY
CHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]