| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486263
Identifier: 124486263
GI number: 124486263
Start: 1478895
End: 1479737
Strand: Reverse
Name: 124486263
Synonym: Mlab_1447
Alternate gene names: NA
Gene position: 1479737-1478895 (Counterclockwise)
Preceding gene: 124486267
Following gene: 124486259
Centisome position: 81.98
GC content: 50.77
Gene sequence:
>843_bases TTGTATATGTGTGCCGAAAAACCGGATTTTATCCGGATGTGGGATGAACAGATCGCACGTGCGTTCGAACAGAAGAGAAA GGCGGGTGAAGACAACGGAAGTTTCTGGGACAATCCGGTCAATGTGGAGAGGTATGTCAGAAGACTGCAGAATGATGACC GGGGAAGAGTCAAAAAGCAGCTTGACTCTATGAATATCCTGCCTGGATCTTCGGTTCTCGATGTCGGGGCAGGACCAGGT ACACTTTCTGTGCCGCTTGCGGCATCGGGTTGTTCTGTGACCGTTGTCGAGCCTTCCTCCCCCATGATCCGGGGGATGGA AGCATATCGTTCACTCACGAACGCTCCGCCAATTCGAACTATCCAAAAGACATGGGAAGAGGCTTCGCCTGATGAGATAG GCAAACATGATGTGGTGATCGCTTCCCTCTCACTCATGATGGCTGACATTGGTTCCTGCATGAAAAAAATGGATGACTGT GCAGAATCTGCGGTCCATCTCTTCTGGTTCCTCCTCCCTCCCTCACTTTCGCGGGGAAACAGCGATCTTTGGCCGATGCT GCACGGTGAACCGTACAACTACGAACCAACTGCCGATATTCTCTGGAATGTGTTGTGTCAGCTGGGGATCTATGCAAATC TTACCGTAGAATCACGAAATACCGGGCAGGCATACACGTCTGCTGCAGAGATGCGGCAGGACTATTATACCCGTCTTCTG GCAAACACCGATGACCAGAAACGTATCGTGGATCAGTATTTGGATCAGCGCCTCCTCAAAACCGATAAGGGATATATCCT CCCCGGAACGTCAAAGACCGCCCACATCTGGTGGGAAAAATAA
Upstream 100 bases:
>100_bases AATACCCGGATTTCTGGTATTCATGATTAACCTTATGTCTGACAGGTAAAATAGTCTTTCTCTCAGGTCCGCACAGTTTA TTACCGTCCGCCTGACATTA
Downstream 100 bases:
>100_bases TTTTTTGAAAAATAAAACAGATTTTAGATCCAGCCGGTCAAAAACGACCAGAGATTGGCAAATCCGGTTATTAGAATATC CTTCATCATATCAAGGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MYMCAEKPDFIRMWDEQIARAFEQKRKAGEDNGSFWDNPVNVERYVRRLQNDDRGRVKKQLDSMNILPGSSVLDVGAGPG TLSVPLAASGCSVTVVEPSSPMIRGMEAYRSLTNAPPIRTIQKTWEEASPDEIGKHDVVIASLSLMMADIGSCMKKMDDC AESAVHLFWFLLPPSLSRGNSDLWPMLHGEPYNYEPTADILWNVLCQLGIYANLTVESRNTGQAYTSAAEMRQDYYTRLL ANTDDQKRIVDQYLDQRLLKTDKGYILPGTSKTAHIWWEK
Sequences:
>Translated_280_residues MYMCAEKPDFIRMWDEQIARAFEQKRKAGEDNGSFWDNPVNVERYVRRLQNDDRGRVKKQLDSMNILPGSSVLDVGAGPG TLSVPLAASGCSVTVVEPSSPMIRGMEAYRSLTNAPPIRTIQKTWEEASPDEIGKHDVVIASLSLMMADIGSCMKKMDDC AESAVHLFWFLLPPSLSRGNSDLWPMLHGEPYNYEPTADILWNVLCQLGIYANLTVESRNTGQAYTSAAEMRQDYYTRLL ANTDDQKRIVDQYLDQRLLKTDKGYILPGTSKTAHIWWEK >Mature_280_residues MYMCAEKPDFIRMWDEQIARAFEQKRKAGEDNGSFWDNPVNVERYVRRLQNDDRGRVKKQLDSMNILPGSSVLDVGAGPG TLSVPLAASGCSVTVVEPSSPMIRGMEAYRSLTNAPPIRTIQKTWEEASPDEIGKHDVVIASLSLMMADIGSCMKKMDDC AESAVHLFWFLLPPSLSRGNSDLWPMLHGEPYNYEPTADILWNVLCQLGIYANLTVESRNTGQAYTSAAEMRQDYYTRLL ANTDDQKRIVDQYLDQRLLKTDKGYILPGTSKTAHIWWEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 31648; Mature: 31648
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYMCAEKPDFIRMWDEQIARAFEQKRKAGEDNGSFWDNPVNVERYVRRLQNDDRGRVKKQ CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH LDSMNILPGSSVLDVGAGPGTLSVPLAASGCSVTVVEPSSPMIRGMEAYRSLTNAPPIRT HHHCCCCCCCCEEECCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHH IQKTWEEASPDEIGKHDVVIASLSLMMADIGSCMKKMDDCAESAVHLFWFLLPPSLSRGN HHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SDLWPMLHGEPYNYEPTADILWNVLCQLGIYANLTVESRNTGQAYTSAAEMRQDYYTRLL CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH ANTDDQKRIVDQYLDQRLLKTDKGYILPGTSKTAHIWWEK CCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECC >Mature Secondary Structure MYMCAEKPDFIRMWDEQIARAFEQKRKAGEDNGSFWDNPVNVERYVRRLQNDDRGRVKKQ CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH LDSMNILPGSSVLDVGAGPGTLSVPLAASGCSVTVVEPSSPMIRGMEAYRSLTNAPPIRT HHHCCCCCCCCEEECCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHH IQKTWEEASPDEIGKHDVVIASLSLMMADIGSCMKKMDDCAESAVHLFWFLLPPSLSRGN HHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SDLWPMLHGEPYNYEPTADILWNVLCQLGIYANLTVESRNTGQAYTSAAEMRQDYYTRLL CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH ANTDDQKRIVDQYLDQRLLKTDKGYILPGTSKTAHIWWEK CCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]