| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is trpE [H]
Identifier: 124486216
GI number: 124486216
Start: 1427880
End: 1429406
Strand: Reverse
Name: trpE [H]
Synonym: Mlab_1399
Alternate gene names: 124486216
Gene position: 1429406-1427880 (Counterclockwise)
Preceding gene: 124486218
Following gene: 124486215
Centisome position: 79.19
GC content: 49.44
Gene sequence:
>1527_bases ATGGAAACTGGTATAATCGGGGACTCTGGTCAAAATGCGGTATTTCCCACAAAAGAGGAATTACCGGCGCTCAAAAAGAC CTTAACGGCCAATACGCTGATCCCCGTTTATACGACTTTTACCGACTCGGGAATCTCGCCTGCATCTGCCTATGAGGCAC TCAGAGGAGAATACGGTTTTCTCCTCGAATCGATAGAAGGAAATGAACATAATGCACGATACTCGGTCCTTGGGACCGGC CTTCTGATGCATCTAACTGCAGATCCGGGAATCAGCATTTCCGGAAAATACATTCCCGCGAAGGGAATCGAAGGCCGGGA TGTGTCTGCGGACTCGCTCAATGAACTATTACGCTGTATCGAGTATCAAAGTCCTGATATTCCCGGATACGCCGGAGGTC TTGCCGGATACTTCTCGTATGATCTGGCCCTTCAAACCCTAAGCGTCCCCGGCATCAAAGAAAAACCGCGGGATTTCCCT CTTGCCGAGTTCATGATGCCGGAAGAGTATGTTGTATTCGATCATGTGCGTGGAACGATCACCATTCTCAGATTTTTATT CGGGATGGATTCAAAAGACATCGATTCCGCATACGCCGAGGCCCTTCGTCAGATCTCCGCAGCGAAAAAGACTCTCTGCG GATTAGCATCATTTGAAGAGAAATTTCCGTGCGAAAAAATGGGTAAGGCCGAATCAACATATACATCCGGCATATCAAAA AACGGGTTCGAAGATCTCGTGAGAACCGCAAAAGAGTATATTCTCAACGGGGATATCTTCCAGGTTGTCATCTCAAAACA ATGCGCTGTCCCTTATGAAAGCGATCCCTTTAGGCTATATCGGCAGATGAGGAAACTGAACCCGAGTCCCTATCTGTATT TCATGGACTTCTCCGACAAACAGGTCATCGGAGCAAGTCCCGAGATGCTGATCAAAGTGGAAGGGCGGCAGGTCACCTCG GTTCCAATCGCCGGGACCAGAAAGCGCGGGAAGGATGCAAAAGAGGATATCGAACTGGAAAGGGAACTCTTAGCTGATAA AAAAGAGTGCGCCGAGCATCTGATGCTCGTTGATCTTTCGAGAAATGATATCGGCCGCGTCTCCAAATACGGAAGCGTTC GGGTGACTGACTTCATGTCGGTTGAAAAATTCTCCCATGTTCAGCACATCGTATCGACCGTTGAGGGCATCCTTTCGGAT GATCAGACCTCCTTCGATGCCTTCATGTCGTGTTTTCCTGCTGGAACCGTCTCCGGGGCACCGAAAATTCGCGCTATGCA GATCATAAATGAACTTGAACCGACATCCCGCGGCCCGTATGCCGGCGCCGTCGGCTATATCGGATTTAATGGAAATCTGG ATCTTGCGATCCTTATCCGGACCGTCGTGGTAAAAGACAAAACTGCGTATTTCCAGTCCGGAGCCGGCATCGTTGCGGAT TCCAATCCTGCATCTGAATTCATCGAGTCGGAAAACAAGGCCGCAAGCATGAAGGCAGCAATTGAATCGGCGGGTGAAAT CGCATGA
Upstream 100 bases:
>100_bases TTGAATTATTTGTACAGTAATGTATATATATGTACAACAGACAACAATTGTTGTGAATTATGCAAACAATCAATACGAAT CGGATGGTGATGCCGGTGGA
Downstream 100 bases:
>100_bases ACGTTCTGGTAATCGACTGTTACGACAGTTTCACCTACAATCTCTGTCAGCAGATAGGATATCTCGGGGGAAAACCGATC GTGGTTAAAAATGACCGACC
Product: anthranilate synthase, component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues METGIIGDSGQNAVFPTKEELPALKKTLTANTLIPVYTTFTDSGISPASAYEALRGEYGFLLESIEGNEHNARYSVLGTG LLMHLTADPGISISGKYIPAKGIEGRDVSADSLNELLRCIEYQSPDIPGYAGGLAGYFSYDLALQTLSVPGIKEKPRDFP LAEFMMPEEYVVFDHVRGTITILRFLFGMDSKDIDSAYAEALRQISAAKKTLCGLASFEEKFPCEKMGKAESTYTSGISK NGFEDLVRTAKEYILNGDIFQVVISKQCAVPYESDPFRLYRQMRKLNPSPYLYFMDFSDKQVIGASPEMLIKVEGRQVTS VPIAGTRKRGKDAKEDIELERELLADKKECAEHLMLVDLSRNDIGRVSKYGSVRVTDFMSVEKFSHVQHIVSTVEGILSD DQTSFDAFMSCFPAGTVSGAPKIRAMQIINELEPTSRGPYAGAVGYIGFNGNLDLAILIRTVVVKDKTAYFQSGAGIVAD SNPASEFIESENKAASMKAAIESAGEIA
Sequences:
>Translated_508_residues METGIIGDSGQNAVFPTKEELPALKKTLTANTLIPVYTTFTDSGISPASAYEALRGEYGFLLESIEGNEHNARYSVLGTG LLMHLTADPGISISGKYIPAKGIEGRDVSADSLNELLRCIEYQSPDIPGYAGGLAGYFSYDLALQTLSVPGIKEKPRDFP LAEFMMPEEYVVFDHVRGTITILRFLFGMDSKDIDSAYAEALRQISAAKKTLCGLASFEEKFPCEKMGKAESTYTSGISK NGFEDLVRTAKEYILNGDIFQVVISKQCAVPYESDPFRLYRQMRKLNPSPYLYFMDFSDKQVIGASPEMLIKVEGRQVTS VPIAGTRKRGKDAKEDIELERELLADKKECAEHLMLVDLSRNDIGRVSKYGSVRVTDFMSVEKFSHVQHIVSTVEGILSD DQTSFDAFMSCFPAGTVSGAPKIRAMQIINELEPTSRGPYAGAVGYIGFNGNLDLAILIRTVVVKDKTAYFQSGAGIVAD SNPASEFIESENKAASMKAAIESAGEIA >Mature_508_residues METGIIGDSGQNAVFPTKEELPALKKTLTANTLIPVYTTFTDSGISPASAYEALRGEYGFLLESIEGNEHNARYSVLGTG LLMHLTADPGISISGKYIPAKGIEGRDVSADSLNELLRCIEYQSPDIPGYAGGLAGYFSYDLALQTLSVPGIKEKPRDFP LAEFMMPEEYVVFDHVRGTITILRFLFGMDSKDIDSAYAEALRQISAAKKTLCGLASFEEKFPCEKMGKAESTYTSGISK NGFEDLVRTAKEYILNGDIFQVVISKQCAVPYESDPFRLYRQMRKLNPSPYLYFMDFSDKQVIGASPEMLIKVEGRQVTS VPIAGTRKRGKDAKEDIELERELLADKKECAEHLMLVDLSRNDIGRVSKYGSVRVTDFMSVEKFSHVQHIVSTVEGILSD DQTSFDAFMSCFPAGTVSGAPKIRAMQIINELEPTSRGPYAGAVGYIGFNGNLDLAILIRTVVVKDKTAYFQSGAGIVAD SNPASEFIESENKAASMKAAIESAGEIA
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=380, Percent_Identity=37.8947368421053, Blast_Score=232, Evalue=4e-62, Organism=Escherichia coli, GI1788114, Length=379, Percent_Identity=31.3984168865435, Blast_Score=212, Evalue=5e-56, Organism=Escherichia coli, GI1786809, Length=261, Percent_Identity=27.5862068965517, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI87082077, Length=270, Percent_Identity=26.2962962962963, Blast_Score=97, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6320935, Length=488, Percent_Identity=38.1147540983607, Blast_Score=293, Evalue=6e-80, Organism=Saccharomyces cerevisiae, GI6324361, Length=402, Percent_Identity=25.1243781094527, Blast_Score=108, Evalue=2e-24,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 55530; Mature: 55530
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METGIIGDSGQNAVFPTKEELPALKKTLTANTLIPVYTTFTDSGISPASAYEALRGEYGF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCHHH LLESIEGNEHNARYSVLGTGLLMHLTADPGISISGKYIPAKGIEGRDVSADSLNELLRCI HHHHCCCCCCCCEEEEEECCEEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHH EYQSPDIPGYAGGLAGYFSYDLALQTLSVPGIKEKPRDFPLAEFMMPEEYVVFDHVRGTI HCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHCCCCCEEEEHHHHHHH TILRFLFGMDSKDIDSAYAEALRQISAAKKTLCGLASFEEKFPCEKMGKAESTYTSGISK HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHCCCCC NGFEDLVRTAKEYILNGDIFQVVISKQCAVPYESDPFRLYRQMRKLNPSPYLYFMDFSDK CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCC QVIGASPEMLIKVEGRQVTSVPIAGTRKRGKDAKEDIELERELLADKKECAEHLMLVDLS EEECCCCCEEEEECCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHEEEECC RNDIGRVSKYGSVRVTDFMSVEKFSHVQHIVSTVEGILSDDQTSFDAFMSCFPAGTVSGA CCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC PKIRAMQIINELEPTSRGPYAGAVGYIGFNGNLDLAILIRTVVVKDKTAYFQSGAGIVAD CHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHCCCCEEEC SNPASEFIESENKAASMKAAIESAGEIA CCHHHHHHHCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure METGIIGDSGQNAVFPTKEELPALKKTLTANTLIPVYTTFTDSGISPASAYEALRGEYGF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCHHH LLESIEGNEHNARYSVLGTGLLMHLTADPGISISGKYIPAKGIEGRDVSADSLNELLRCI HHHHCCCCCCCCEEEEEECCEEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHH EYQSPDIPGYAGGLAGYFSYDLALQTLSVPGIKEKPRDFPLAEFMMPEEYVVFDHVRGTI HCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHCCCCCEEEEHHHHHHH TILRFLFGMDSKDIDSAYAEALRQISAAKKTLCGLASFEEKFPCEKMGKAESTYTSGISK HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHCCCCC NGFEDLVRTAKEYILNGDIFQVVISKQCAVPYESDPFRLYRQMRKLNPSPYLYFMDFSDK CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCC QVIGASPEMLIKVEGRQVTSVPIAGTRKRGKDAKEDIELERELLADKKECAEHLMLVDLS EEECCCCCEEEEECCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHEEEECC RNDIGRVSKYGSVRVTDFMSVEKFSHVQHIVSTVEGILSDDQTSFDAFMSCFPAGTVSGA CCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC PKIRAMQIINELEPTSRGPYAGAVGYIGFNGNLDLAILIRTVVVKDKTAYFQSGAGIVAD CHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHCCCCEEEC SNPASEFIESENKAASMKAAIESAGEIA CCHHHHHHHCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2732211 [H]