| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is hisE
Identifier: 124486201
GI number: 124486201
Start: 1410788
End: 1411102
Strand: Reverse
Name: hisE
Synonym: Mlab_1384
Alternate gene names: 124486201
Gene position: 1411102-1410788 (Counterclockwise)
Preceding gene: 124486202
Following gene: 124486200
Centisome position: 78.18
GC content: 47.94
Gene sequence:
>315_bases ATGACGGATGCAAAAGTATTCGATGAGTTATGGCAGGTCATCTGCGAAAGGGCGGCGTCTGAAAGTTTAGAGAAGTCATA TGTGCGGCATCTCCTGTTTCATGAAAAGGGCATCGACAAATCCCTTGAAAAGGTAGGAGAAGAGGCCGTTGAATTCATTC TCGCCGCAAAGAACGGCGTTTCTGAAAAAACGGTGGGAGAAGCAGCGGATCTCATTTTCCATATGATGGTTGCTTTAAAA GCGGCTGATGTGGACTTTGATCTCGTGGAAGAAGAGCTCGCCGTTCGTCGCGCCGGGATGCATCTTCACGATTAA
Upstream 100 bases:
>100_bases TCGGAAAAGGCGGGTCGACGATCGAAAAAGCCAGAATTCTGGTCCGAAGGTTTTATGGTAAAGAGGTTGGAGATATCCTC ATACCGAACAGAGGAAGCGT
Downstream 100 bases:
>100_bases TCCGGCGAATCTGTGGTTTCTTATCTCATTCAGACGTAACCCCTATTAACCCGAACCGCCACATAATATACATGAAACTC TTAGTCAGCCCAAGTTCAAT
Product: phosphoribosyl-ATP pyrophosphatase
Products: NA
Alternate protein names: PRA-PH
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MTDAKVFDELWQVICERAASESLEKSYVRHLLFHEKGIDKSLEKVGEEAVEFILAAKNGVSEKTVGEAADLIFHMMVALK AADVDFDLVEEELAVRRAGMHLHD
Sequences:
>Translated_104_residues MTDAKVFDELWQVICERAASESLEKSYVRHLLFHEKGIDKSLEKVGEEAVEFILAAKNGVSEKTVGEAADLIFHMMVALK AADVDFDLVEEELAVRRAGMHLHD >Mature_103_residues TDAKVFDELWQVICERAASESLEKSYVRHLLFHEKGIDKSLEKVGEEAVEFILAAKNGVSEKTVGEAADLIFHMMVALKA ADVDFDLVEEELAVRRAGMHLHD
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0140
COG function: function code E; Phosphoribosyl-ATP pyrophosphohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-PH family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS2_METLZ (A2ST94)
Other databases:
- EMBL: CP000559 - RefSeq: YP_001030817.1 - ProteinModelPortal: A2ST94 - SMR: A2ST94 - STRING: A2ST94 - GeneID: 4794616 - GenomeReviews: CP000559_GR - KEGG: mla:Mlab_1384 - eggNOG: arNOG13425 - HOGENOM: HBG646527 - OMA: TIDERAN - ProtClustDB: CLSK852329 - BioCyc: MLAB410358:MLAB_1384-MONOMER - GO: GO:0005737 - HAMAP: MF_01020 - InterPro: IPR008179 - InterPro: IPR021130 - TIGRFAMs: TIGR03188
Pfam domain/function: PF01503 PRA-PH
EC number: =3.6.1.31
Molecular weight: Translated: 11672; Mature: 11541
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAKVFDELWQVICERAASESLEKSYVRHLLFHEKGIDKSLEKVGEEAVEFILAAKNGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC SEKTVGEAADLIFHMMVALKAADVDFDLVEEELAVRRAGMHLHD CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TDAKVFDELWQVICERAASESLEKSYVRHLLFHEKGIDKSLEKVGEEAVEFILAAKNGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC SEKTVGEAADLIFHMMVALKAADVDFDLVEEELAVRRAGMHLHD CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA