| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486155
Identifier: 124486155
GI number: 124486155
Start: 1364053
End: 1364283
Strand: Reverse
Name: 124486155
Synonym: Mlab_1337
Alternate gene names: NA
Gene position: 1364283-1364053 (Counterclockwise)
Preceding gene: 124486156
Following gene: 124486154
Centisome position: 75.59
GC content: 53.68
Gene sequence:
>231_bases ATGAACCACGCAGCATGTTTTGTCTTTGAAACCCCGTTTGCAGCAAAACTGTATGAAGTTCTCGCCCCGGAAACCGTCAG CGATCCGGGGGAAAAATCCAACGTGCGGCTCACCTGCGGCGACTCTTCCGTGACACTCCAGGTGGAAGCGGAGGATGCGG CGTCTCTTCGTGCGTCCCTCAATATGTGGCTGCGGTTGGTTAATGTATCCCACGAAGTATTGGAGTTGTAA
Upstream 100 bases:
>100_bases ACCTTTCGCCGCATGTTCCCATCACCTATGATGAGAACGCCGACGGTCCTATCGTTTTTTGCGGCACCCAGAAAAGGCAG TATGTCCTGCAGGTCATGGT
Downstream 100 bases:
>100_bases AAAATGACAGCACCCCAGCAGGCGGCGGGAATCCCGCCGCAGATCCAGCAGCAGCTTGGAATGTTCCAGCAGATCCAGCA GCAGCTTCAGCAGGTATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MNHAACFVFETPFAAKLYEVLAPETVSDPGEKSNVRLTCGDSSVTLQVEAEDAASLRASLNMWLRLVNVSHEVLEL
Sequences:
>Translated_76_residues MNHAACFVFETPFAAKLYEVLAPETVSDPGEKSNVRLTCGDSSVTLQVEAEDAASLRASLNMWLRLVNVSHEVLEL >Mature_76_residues MNHAACFVFETPFAAKLYEVLAPETVSDPGEKSNVRLTCGDSSVTLQVEAEDAASLRASLNMWLRLVNVSHEVLEL
Specific function: Unknown
COG id: COG2892
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8322; Mature: 8322
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHAACFVFETPFAAKLYEVLAPETVSDPGEKSNVRLTCGDSSVTLQVEAEDAASLRASL CCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHH NMWLRLVNVSHEVLEL HHHHHHHCCCHHHHCC >Mature Secondary Structure MNHAACFVFETPFAAKLYEVLAPETVSDPGEKSNVRLTCGDSSVTLQVEAEDAASLRASL CCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHH NMWLRLVNVSHEVLEL HHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA