Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

Click here to switch to the map view.

The map label for this gene is 124486121

Identifier: 124486121

GI number: 124486121

Start: 1326893

End: 1327585

Strand: Reverse

Name: 124486121

Synonym: Mlab_1302

Alternate gene names: NA

Gene position: 1327585-1326893 (Counterclockwise)

Preceding gene: 124486122

Following gene: 124486120

Centisome position: 73.55

GC content: 50.22

Gene sequence:

>693_bases
ATGAGCCGCATCAGTACCTCCGATCTGCACGGATACTTGATCGACGAGAGAAATATGGGTTCCCTTGCCGAAATTCCGGC
AACGCTCTATGAAGAGATCCATGCCGATATTCTTTCACTCTACAAGCAGGCCGCGGCGCACGAGGATCCGTTCGGTGAGG
GCGCACAAAGTATTCTAAAGGAGCGCGAAAGTCTGCGCGAATATATTCGTGATCTCTACGGGGTCAGGACACGAAAAATC
CTCGCTCTTGCCCTCGCTCGGGCAAATGGTGAAGAAATCGACCGGGATGAAATCAGGATGATGGTGCCGGGCGAACGCGT
TTTGTTTGATGTCGTGTATGAATCAGCTCTCTCATGCAGAAAGACTCTTTTAGATGGGAAACCAACATTAGAGACCACTG
CATACCATTTCGTTCCCGCAGAGGTTTCAGCCGAACAAGCTCCGGTTTTGCTGCAGCCTGTGAACGAAACTCCGGATGAG
TTGTGCGCAGATGAAGTGAACGTAACGTCCGCCGATGCCCATGCTCCCGAGTCATACCGCGTGATAGCGGTATATGAAAA
TCTTCCAGAATTTCAGGATTATAGCGGACGAATTTACGCTCTTTCGCCAGGAGATGTCGTATCGCTGCCACCCCAGATGG
CAGATGTTCTGTGTAAAGACAACAAAGCCTTAAGTATCAGGCTTCGCAAATAA

Upstream 100 bases:

>100_bases
GAATAATTATACGCTGACAGCGGGCCGAAATGTTGTTCCCGAGGCATTGGGCGTTTTTCTCTGCTGCAGAGGGATTGCCG
AATTGTCGGGAGGTATCTGA

Downstream 100 bases:

>100_bases
GTATGGTATTTGGTATTCCCGTTTAAAAGGGGTAAATATTCATGAAGAAACCAGTAAAATTTAACACCTACTGCCCATAC
TGCCGGAAACACACCGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSRISTSDLHGYLIDERNMGSLAEIPATLYEEIHADILSLYKQAAAHEDPFGEGAQSILKERESLREYIRDLYGVRTRKI
LALALARANGEEIDRDEIRMMVPGERVLFDVVYESALSCRKTLLDGKPTLETTAYHFVPAEVSAEQAPVLLQPVNETPDE
LCADEVNVTSADAHAPESYRVIAVYENLPEFQDYSGRIYALSPGDVVSLPPQMADVLCKDNKALSIRLRK

Sequences:

>Translated_230_residues
MSRISTSDLHGYLIDERNMGSLAEIPATLYEEIHADILSLYKQAAAHEDPFGEGAQSILKERESLREYIRDLYGVRTRKI
LALALARANGEEIDRDEIRMMVPGERVLFDVVYESALSCRKTLLDGKPTLETTAYHFVPAEVSAEQAPVLLQPVNETPDE
LCADEVNVTSADAHAPESYRVIAVYENLPEFQDYSGRIYALSPGDVVSLPPQMADVLCKDNKALSIRLRK
>Mature_229_residues
SRISTSDLHGYLIDERNMGSLAEIPATLYEEIHADILSLYKQAAAHEDPFGEGAQSILKERESLREYIRDLYGVRTRKIL
ALALARANGEEIDRDEIRMMVPGERVLFDVVYESALSCRKTLLDGKPTLETTAYHFVPAEVSAEQAPVLLQPVNETPDEL
CADEVNVTSADAHAPESYRVIAVYENLPEFQDYSGRIYALSPGDVVSLPPQMADVLCKDNKALSIRLRK

Specific function: Unknown

COG id: COG1711

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25683; Mature: 25552

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRISTSDLHGYLIDERNMGSLAEIPATLYEEIHADILSLYKQAAAHEDPFGEGAQSILK
CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ERESLREYIRDLYGVRTRKILALALARANGEEIDRDEIRMMVPGERVLFDVVYESALSCR
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHEEEECCCHHHHHHHHHHHHHHHH
KTLLDGKPTLETTAYHFVPAEVSAEQAPVLLQPVNETPDELCADEVNVTSADAHAPESYR
HHHHCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCEE
VIAVYENLPEFQDYSGRIYALSPGDVVSLPPQMADVLCKDNKALSIRLRK
EEEEECCCCCCCCCCCEEEEECCCCEEECCHHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure 
SRISTSDLHGYLIDERNMGSLAEIPATLYEEIHADILSLYKQAAAHEDPFGEGAQSILK
CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ERESLREYIRDLYGVRTRKILALALARANGEEIDRDEIRMMVPGERVLFDVVYESALSCR
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHEEEECCCHHHHHHHHHHHHHHHH
KTLLDGKPTLETTAYHFVPAEVSAEQAPVLLQPVNETPDELCADEVNVTSADAHAPESYR
HHHHCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCEE
VIAVYENLPEFQDYSGRIYALSPGDVVSLPPQMADVLCKDNKALSIRLRK
EEEEECCCCCCCCCCCEEEEECCCCEEECCHHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA