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The map label for this gene is 124486068

Identifier: 124486068

GI number: 124486068

Start: 1274085

End: 1274369

Strand: Reverse

Name: 124486068

Synonym: Mlab_1248

Alternate gene names: NA

Gene position: 1274369-1274085 (Counterclockwise)

Preceding gene: 124486069

Following gene: 124486067

Centisome position: 70.6

GC content: 49.12

Gene sequence:

>285_bases
ATGTATAAGGGAATGAAGCTGAAGATTATCGAGCTTGAGAAGGATAAGATACGGGTCACTCTGGAGGGTGAAGGGCACAC
GATCGTGAATGCGCTGGTGGATGAGATCCTTGCAGATCCCGAAGTGGATGTTGCCAAATATGTGATCAAATACCAGTTCT
CCGATCCGGAAGTGTTTATCACCATGAAGCCCGGTTCTACAAAAGAGCCGCTCACGGTAATGCGTGAAGCCGCCCAGCAT
ATGATCGACCGCTGCGACGCTCTTCTGAGCTGTCTGAAAAACTAA

Upstream 100 bases:

>100_bases
CACCCGTATCTCCGGTCAGGTTGCCTTCACTCAGAAAATCCTTTAAATCTTTTTTTTTTGTTATTGATCCATCCCACAAT
TATATAGTATCGTCCGGCGA

Downstream 100 bases:

>100_bases
TACATTTTGTTTTTCTCCATAGAGAGATAGGCGAAGTATTATATTGCTCTAACCCTTACATAATAGAGCACTCAGTTTAG
TGGAGCAGTATCTGGCATAC

Product: DNA-directed RNA polymerase, subunit L

Products: NA

Alternate protein names: DNA-Directed RNA Polymerase Subunit L; RNA Polymerase

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MYKGMKLKIIELEKDKIRVTLEGEGHTIVNALVDEILADPEVDVAKYVIKYQFSDPEVFITMKPGSTKEPLTVMREAAQH
MIDRCDALLSCLKN

Sequences:

>Translated_94_residues
MYKGMKLKIIELEKDKIRVTLEGEGHTIVNALVDEILADPEVDVAKYVIKYQFSDPEVFITMKPGSTKEPLTVMREAAQH
MIDRCDALLSCLKN
>Mature_94_residues
MYKGMKLKIIELEKDKIRVTLEGEGHTIVNALVDEILADPEVDVAKYVIKYQFSDPEVFITMKPGSTKEPLTVMREAAQH
MIDRCDALLSCLKN

Specific function: Unknown

COG id: COG1761

COG function: function code K; DNA-directed RNA polymerase, subunit L

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10668; Mature: 10668

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKGMKLKIIELEKDKIRVTLEGEGHTIVNALVDEILADPEVDVAKYVIKYQFSDPEVFI
CCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEHEEEEECCCCEEEE
TMKPGSTKEPLTVMREAAQHMIDRCDALLSCLKN
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYKGMKLKIIELEKDKIRVTLEGEGHTIVNALVDEILADPEVDVAKYVIKYQFSDPEVFI
CCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEHEEEEECCCCEEEE
TMKPGSTKEPLTVMREAAQHMIDRCDALLSCLKN
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA