| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is mod [H]
Identifier: 124486021
GI number: 124486021
Start: 1228056
End: 1229966
Strand: Reverse
Name: mod [H]
Synonym: Mlab_1201
Alternate gene names: 124486021
Gene position: 1229966-1228056 (Counterclockwise)
Preceding gene: 124486022
Following gene: 124486020
Centisome position: 68.14
GC content: 43.9
Gene sequence:
>1911_bases ATGGAACAACACAACCCCGCTTTTCAAAAAATACCTCTTGCAACAACGAATCCTTTCTCTGAAAATCTCCGCCGCCTTCA GGCACTTTTTCCTTCGATCGTCAAAGACGGCCAGATCGATTTCGATGCCCTGAAAGAGGAACTTGGCGAAGTCGAAGAAG TGGATAAGGAACATTATGAACTGTCCTGGGCAGGAAAGCAGGAGGCAAAACGGACCGCAGGCGAGCCAATACTTGGACGC ACGCTGAAGTATGTCCCAGAGGAAAGTAAAAATCCAGACTCTACAGAGAACCTTTACATCGAGGGAGATAATTTAGAGGT TCTGAAGCTTCTGCAGAATTCTTACGTCGGCAAGATCAAGATGATCTACATCGATCCGCCGTATAATACGGGCAACGATT TTGTCTATAAGGACCACTTTGCGGTATCGGCAGAGGAAAATGCGAAAGCGGAAGGAGATATTAGCGCCGAAGGGGAGCGG TATGCGGTAAATCCGAAAACGTCTGGCAAGTATCATGCAAATTGGCTCTCAATGATGTATCCTCGGCTGCGGCTCGCGAA GAATCTTTTGAGAGAGGATGGTATTATGTTCATCTCAATCGATGATAATGAAGTGGGAAATTTACGGGAGATTTGCGATG AAATTTTCGGGGACAATAATTTTTTAGCTAATCTCATTTGGGAAAAAAAATATACAAGATCAAATGATGCTACATTTTTC TCTGATAATCATGATCACATACTCTGTTATTGTCGTAATGTTGAATGTTTTAAAATTGGAAGATTGCCTAGAACAGAGGA GATGGACGTAGCATATAAAAATCCAGATAATCATCCCAAAGGACTTTGGAAAGCAACACCATTACATGCAAAAAGTGGTT CTGCCAATAGTGCTAACTTTACATATACCTTCAAAAATGGTGTCGTATTTACTCCACCAACAGGAACATATTCTCGATAT TCTAGTGATACATTGAAAAAATATGATGATAATAATGAAATTTGGTTTGGTCAAGATGGGATGTCTATCCCCGCACGTAA AACATTTCTGTGTGATCTAAAGAATGAGGGGATTGTGCCAAGTACAATTATCCCATATAAAACTGGGGGACACAATCATG AATCGGTAGAAGAATTGAAAGATATTTTTATAAAAAATATCTTCACAAATCCAAAACCTACACGTTTAATCCGCCATCTT GCAACAATAGCTAATCTTAATCATGAATCTCTCATCCTCGACTTCTTCTCCGGGTCTTCAACAACGGCCCATGCAGTGAT GCAGCTCAATGCCGAAGATGGAGGGACCCGAAAATTCATCATGGTCCAGCTGCCTGAAGCCTGTGATGAAAAATCTGAAG CATACAAAGCCGGCTACAAAACCATCTGTGACATCGGAAAAGAACGGATTCGCAGAGCCGGGGACAAGATCCAAAAAGAG CACCCGGAAGCTTCGCTTGACACCGGATTCAACGTTTTCCGTCTTGCAGACACCAACATCCGCTGGATCGCCGCCGAAAC CGGACAAGTAAGCCTTGAAGATGCAATCATCACCAGTGGGAAAGACTTACGCGACTTCATGCCCGGATACACCGACAAAG ACGTCGTCTATGAAATACTGCTTCGCCAGTATGACATCCCCCTGACCGCAAAAATTGAATCTCTTGGTAAAATCGGAAAA CGCACTTACTCCGTCGCCGGCACCCTGATTGTCTGCCTCGAAGAGAACATAACAAACGAAATCATAGACAAGATTGCCGG AATCGAACCCGTCCCCCACAAAATCATCTTCCGTGACAGCGCATTCGGGGATGACATCTCCCTCAAAGAAAACACCATGA TGCGTCTTGACGCCCTCATGCAGAAACACAGCTCCGGTGGAAAGACCCCATACCGTGTAGAATTCCTCTGA
Upstream 100 bases:
>100_bases GTGTATGTTTTGGGAAGAAGAACATTTTACTCTCCCCCCCACTCGTAATCTTTAACCCCATTCCCCGCCCAATTACACAT ATTCTATTGGTGACATCTGC
Downstream 100 bases:
>100_bases GGTCCCCATGACCGGCAAAATCACCTTCAAATTCGTCGACCTCCCCTATCAGATAGACGCCGTCAATTCCGTCGTCGACC TCTTTTCGGGACAAAACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MEQHNPAFQKIPLATTNPFSENLRRLQALFPSIVKDGQIDFDALKEELGEVEEVDKEHYELSWAGKQEAKRTAGEPILGR TLKYVPEESKNPDSTENLYIEGDNLEVLKLLQNSYVGKIKMIYIDPPYNTGNDFVYKDHFAVSAEENAKAEGDISAEGER YAVNPKTSGKYHANWLSMMYPRLRLAKNLLREDGIMFISIDDNEVGNLREICDEIFGDNNFLANLIWEKKYTRSNDATFF SDNHDHILCYCRNVECFKIGRLPRTEEMDVAYKNPDNHPKGLWKATPLHAKSGSANSANFTYTFKNGVVFTPPTGTYSRY SSDTLKKYDDNNEIWFGQDGMSIPARKTFLCDLKNEGIVPSTIIPYKTGGHNHESVEELKDIFIKNIFTNPKPTRLIRHL ATIANLNHESLILDFFSGSSTTAHAVMQLNAEDGGTRKFIMVQLPEACDEKSEAYKAGYKTICDIGKERIRRAGDKIQKE HPEASLDTGFNVFRLADTNIRWIAAETGQVSLEDAIITSGKDLRDFMPGYTDKDVVYEILLRQYDIPLTAKIESLGKIGK RTYSVAGTLIVCLEENITNEIIDKIAGIEPVPHKIIFRDSAFGDDISLKENTMMRLDALMQKHSSGGKTPYRVEFL
Sequences:
>Translated_636_residues MEQHNPAFQKIPLATTNPFSENLRRLQALFPSIVKDGQIDFDALKEELGEVEEVDKEHYELSWAGKQEAKRTAGEPILGR TLKYVPEESKNPDSTENLYIEGDNLEVLKLLQNSYVGKIKMIYIDPPYNTGNDFVYKDHFAVSAEENAKAEGDISAEGER YAVNPKTSGKYHANWLSMMYPRLRLAKNLLREDGIMFISIDDNEVGNLREICDEIFGDNNFLANLIWEKKYTRSNDATFF SDNHDHILCYCRNVECFKIGRLPRTEEMDVAYKNPDNHPKGLWKATPLHAKSGSANSANFTYTFKNGVVFTPPTGTYSRY SSDTLKKYDDNNEIWFGQDGMSIPARKTFLCDLKNEGIVPSTIIPYKTGGHNHESVEELKDIFIKNIFTNPKPTRLIRHL ATIANLNHESLILDFFSGSSTTAHAVMQLNAEDGGTRKFIMVQLPEACDEKSEAYKAGYKTICDIGKERIRRAGDKIQKE HPEASLDTGFNVFRLADTNIRWIAAETGQVSLEDAIITSGKDLRDFMPGYTDKDVVYEILLRQYDIPLTAKIESLGKIGK RTYSVAGTLIVCLEENITNEIIDKIAGIEPVPHKIIFRDSAFGDDISLKENTMMRLDALMQKHSSGGKTPYRVEFL >Mature_636_residues MEQHNPAFQKIPLATTNPFSENLRRLQALFPSIVKDGQIDFDALKEELGEVEEVDKEHYELSWAGKQEAKRTAGEPILGR TLKYVPEESKNPDSTENLYIEGDNLEVLKLLQNSYVGKIKMIYIDPPYNTGNDFVYKDHFAVSAEENAKAEGDISAEGER YAVNPKTSGKYHANWLSMMYPRLRLAKNLLREDGIMFISIDDNEVGNLREICDEIFGDNNFLANLIWEKKYTRSNDATFF SDNHDHILCYCRNVECFKIGRLPRTEEMDVAYKNPDNHPKGLWKATPLHAKSGSANSANFTYTFKNGVVFTPPTGTYSRY SSDTLKKYDDNNEIWFGQDGMSIPARKTFLCDLKNEGIVPSTIIPYKTGGHNHESVEELKDIFIKNIFTNPKPTRLIRHL ATIANLNHESLILDFFSGSSTTAHAVMQLNAEDGGTRKFIMVQLPEACDEKSEAYKAGYKTICDIGKERIRRAGDKIQKE HPEASLDTGFNVFRLADTNIRWIAAETGQVSLEDAIITSGKDLRDFMPGYTDKDVVYEILLRQYDIPLTAKIESLGKIGK RTYSVAGTLIVCLEENITNEIIDKIAGIEPVPHKIIFRDSAFGDDISLKENTMMRLDALMQKHSSGGKTPYRVEFL
Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 72003; Mature: 72003
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQHNPAFQKIPLATTNPFSENLRRLQALFPSIVKDGQIDFDALKEELGEVEEVDKEHYE CCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHEE LSWAGKQEAKRTAGEPILGRTLKYVPEESKNPDSTENLYIEGDNLEVLKLLQNSYVGKIK EEECCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEE MIYIDPPYNTGNDFVYKDHFAVSAEENAKAEGDISAEGERYAVNPKTSGKYHANWLSMMY EEEECCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHH PRLRLAKNLLREDGIMFISIDDNEVGNLREICDEIFGDNNFLANLIWEKKYTRSNDATFF HHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCEEE SDNHDHILCYCRNVECFKIGRLPRTEEMDVAYKNPDNHPKGLWKATPLHAKSGSANSANF ECCCCEEEEEECCCCEEEECCCCCCCCCCEEECCCCCCCCCCEECCCCCCCCCCCCCCEE TYTFKNGVVFTPPTGTYSRYSSDTLKKYDDNNEIWFGQDGMSIPARKTFLCDLKNEGIVP EEEECCCEEECCCCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCC STIIPYKTGGHNHESVEELKDIFIKNIFTNPKPTRLIRHLATIANLNHESLILDFFSGSS CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCC TTAHAVMQLNAEDGGTRKFIMVQLPEACDEKSEAYKAGYKTICDIGKERIRRAGDKIQKE CCEEEEEEEECCCCCCEEEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HPEASLDTGFNVFRLADTNIRWIAAETGQVSLEDAIITSGKDLRDFMPGYTDKDVVYEIL CCCCCCCCCCEEEEEECCCEEEEEECCCCEEECHHHCCCCCHHHHHCCCCCCHHHHHHHH LRQYDIPLTAKIESLGKIGKRTYSVAGTLIVCLEENITNEIIDKIAGIEPVPHKIIFRDS HHHCCCCHHHHHHHHHHHHHHHHEECCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECC AFGDDISLKENTMMRLDALMQKHSSGGKTPYRVEFL CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEC >Mature Secondary Structure MEQHNPAFQKIPLATTNPFSENLRRLQALFPSIVKDGQIDFDALKEELGEVEEVDKEHYE CCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHEE LSWAGKQEAKRTAGEPILGRTLKYVPEESKNPDSTENLYIEGDNLEVLKLLQNSYVGKIK EEECCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEE MIYIDPPYNTGNDFVYKDHFAVSAEENAKAEGDISAEGERYAVNPKTSGKYHANWLSMMY EEEECCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHH PRLRLAKNLLREDGIMFISIDDNEVGNLREICDEIFGDNNFLANLIWEKKYTRSNDATFF HHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCEEE SDNHDHILCYCRNVECFKIGRLPRTEEMDVAYKNPDNHPKGLWKATPLHAKSGSANSANF ECCCCEEEEEECCCCEEEECCCCCCCCCCEEECCCCCCCCCCEECCCCCCCCCCCCCCEE TYTFKNGVVFTPPTGTYSRYSSDTLKKYDDNNEIWFGQDGMSIPARKTFLCDLKNEGIVP EEEECCCEEECCCCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCC STIIPYKTGGHNHESVEELKDIFIKNIFTNPKPTRLIRHLATIANLNHESLILDFFSGSS CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCC TTAHAVMQLNAEDGGTRKFIMVQLPEACDEKSEAYKAGYKTICDIGKERIRRAGDKIQKE CCEEEEEEEECCCCCCEEEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HPEASLDTGFNVFRLADTNIRWIAAETGQVSLEDAIITSGKDLRDFMPGYTDKDVVYEIL CCCCCCCCCCEEEEEECCCEEEEEECCCCEEECHHHCCCCCHHHHHCCCCCCHHHHHHHH LRQYDIPLTAKIESLGKIGKRTYSVAGTLIVCLEENITNEIIDKIAGIEPVPHKIIFRDS HHHCCCCHHHHHHHHHHHHHHHHEECCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECC AFGDDISLKENTMMRLDALMQKHSSGGKTPYRVEFL CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8387444; 11677609 [H]