| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486009
Identifier: 124486009
GI number: 124486009
Start: 1216322
End: 1217356
Strand: Reverse
Name: 124486009
Synonym: Mlab_1189
Alternate gene names: NA
Gene position: 1217356-1216322 (Counterclockwise)
Preceding gene: 124486010
Following gene: 124486007
Centisome position: 67.44
GC content: 55.36
Gene sequence:
>1035_bases ATGATGCTTGATACAGATTTTTTAGAACGTATCGCTCCTTATATTGAACCCCTTACGGCCGAGGAACGGGCCGAATATAT TGCGGAAGGCGAAGTATCGGTACAGATCCGGGAAGGCGAAGGTATCACGCCGAAGGATTATCTCCAGCTGGTGGAAAATA TCGGCCTCTATCTTGGAAAGACGAGCGGCGAAGGCTTCGAGTCGAATTATCAGACGATCCAGCTTAGTAACGGCAAGACC CTGCTCGTTATCCAGCTGCCGGGCGGCGGCAATCTGAACGTATTTCTGACCCCCGAGGGCAAAATGATCCTTGATACCGG TTACGGCTGCTATTATAAAGACTGCGAGCGGATGATCAAAGCCCTCAACGCAGGGGATTTTTCCGATGTGAAGTTCGTGG TCTGCACGCACGGTGATGCGGATCACTGCGGGGCGTCGGGGTATTTCCCGGTGACGCCTGTGATGCATCCGGTGACAAAA GCCCTTCTCGAGAGCGGGACGCGGGGCTATGCGTCGCCGAACGGCCGCGAGATTCTGGAGAAGTTCTACACGACGACGAT CAACACCTACTCCCGCATGAACGTGCCGGAGACGGTAGAATATTGTAAGACCGAGCCGGTCGGCACACGCGGGCTTTTCC CGGTCATCGACTCGTTTTCGTTTGCGGATATGCAGTTCGAGGTTTGGGCAAGTCTCGGCGGTCACATTGCGGGCCAGATC TTTTTGTACGAGCCAAACGAGGGACTGCTTTTCACAAGCGACGCTCTGCTGAACTTTGCGACGCTCTCCAAGGCGCGTGC GGATTACAGTTCGATCGCGGATTCGATGATCGGCTCGGTGAACGTGAACAGCGAGACGGCCAGAATCGAACGACGCGAAC TCCTGAGGATCGCCAAAGAGTTTGACGAACTGCAGAAAGCCGCCGGCAAGCGTCTTCTGATCTGCTGCGGCCATGGGGCG GTGTCCATTCTGGATGAAAAAGGCATGCTCTCTCCTTACAGCGAGCCGCTCTACTACGCGGCAGACTCCTGCTGA
Upstream 100 bases:
>100_bases TGCCCGCAGAAAGTTCTCGTGGCGGACACACCTTTGGATATTCTGCGGCTTTTACGACCATAAATATAGTAATGGTTCAT TGCCAATATGATAAAAACAC
Downstream 100 bases:
>100_bases TCCTTTTCTCCCCTTTTTTCTCGCTGTTTTCCCGGATGGTGTTTCGGCCTTATGCGGCCGGCCCTCTTTGTTCGTATATC TTCATATGGTTTATCGGCTT
Product: vesicle-fusing ATPase
Products: NA
Alternate protein names: Beta-Lactamase-Like; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Vesicle-Fusing ATPase
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MMLDTDFLERIAPYIEPLTAEERAEYIAEGEVSVQIREGEGITPKDYLQLVENIGLYLGKTSGEGFESNYQTIQLSNGKT LLVIQLPGGGNLNVFLTPEGKMILDTGYGCYYKDCERMIKALNAGDFSDVKFVVCTHGDADHCGASGYFPVTPVMHPVTK ALLESGTRGYASPNGREILEKFYTTTINTYSRMNVPETVEYCKTEPVGTRGLFPVIDSFSFADMQFEVWASLGGHIAGQI FLYEPNEGLLFTSDALLNFATLSKARADYSSIADSMIGSVNVNSETARIERRELLRIAKEFDELQKAAGKRLLICCGHGA VSILDEKGMLSPYSEPLYYAADSC
Sequences:
>Translated_344_residues MMLDTDFLERIAPYIEPLTAEERAEYIAEGEVSVQIREGEGITPKDYLQLVENIGLYLGKTSGEGFESNYQTIQLSNGKT LLVIQLPGGGNLNVFLTPEGKMILDTGYGCYYKDCERMIKALNAGDFSDVKFVVCTHGDADHCGASGYFPVTPVMHPVTK ALLESGTRGYASPNGREILEKFYTTTINTYSRMNVPETVEYCKTEPVGTRGLFPVIDSFSFADMQFEVWASLGGHIAGQI FLYEPNEGLLFTSDALLNFATLSKARADYSSIADSMIGSVNVNSETARIERRELLRIAKEFDELQKAAGKRLLICCGHGA VSILDEKGMLSPYSEPLYYAADSC >Mature_344_residues MMLDTDFLERIAPYIEPLTAEERAEYIAEGEVSVQIREGEGITPKDYLQLVENIGLYLGKTSGEGFESNYQTIQLSNGKT LLVIQLPGGGNLNVFLTPEGKMILDTGYGCYYKDCERMIKALNAGDFSDVKFVVCTHGDADHCGASGYFPVTPVMHPVTK ALLESGTRGYASPNGREILEKFYTTTINTYSRMNVPETVEYCKTEPVGTRGLFPVIDSFSFADMQFEVWASLGGHIAGQI FLYEPNEGLLFTSDALLNFATLSKARADYSSIADSMIGSVNVNSETARIERRELLRIAKEFDELQKAAGKRLLICCGHGA VSILDEKGMLSPYSEPLYYAADSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37882; Mature: 37882
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLDTDFLERIAPYIEPLTAEERAEYIAEGEVSVQIREGEGITPKDYLQLVENIGLYLGK CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEC TSGEGFESNYQTIQLSNGKTLLVIQLPGGGNLNVFLTPEGKMILDTGYGCYYKDCERMIK CCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHH ALNAGDFSDVKFVVCTHGDADHCGASGYFPVTPVMHPVTKALLESGTRGYASPNGREILE HHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH KFYTTTINTYSRMNVPETVEYCKTEPVGTRGLFPVIDSFSFADMQFEVWASLGGHIAGQI HHHHHHHCCHHCCCCCHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCEEEEE FLYEPNEGLLFTSDALLNFATLSKARADYSSIADSMIGSVNVNSETARIERRELLRIAKE EEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH FDELQKAAGKRLLICCGHGAVSILDEKGMLSPYSEPLYYAADSC HHHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEECCCC >Mature Secondary Structure MMLDTDFLERIAPYIEPLTAEERAEYIAEGEVSVQIREGEGITPKDYLQLVENIGLYLGK CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEC TSGEGFESNYQTIQLSNGKTLLVIQLPGGGNLNVFLTPEGKMILDTGYGCYYKDCERMIK CCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHH ALNAGDFSDVKFVVCTHGDADHCGASGYFPVTPVMHPVTKALLESGTRGYASPNGREILE HHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH KFYTTTINTYSRMNVPETVEYCKTEPVGTRGLFPVIDSFSFADMQFEVWASLGGHIAGQI HHHHHHHCCHHCCCCCHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCEEEEE FLYEPNEGLLFTSDALLNFATLSKARADYSSIADSMIGSVNVNSETARIERRELLRIAKE EEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH FDELQKAAGKRLLICCGHGAVSILDEKGMLSPYSEPLYYAADSC HHHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA