| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486005
Identifier: 124486005
GI number: 124486005
Start: 1210739
End: 1212076
Strand: Reverse
Name: 124486005
Synonym: Mlab_1185
Alternate gene names: NA
Gene position: 1212076-1210739 (Counterclockwise)
Preceding gene: 124486007
Following gene: 124486000
Centisome position: 67.15
GC content: 46.64
Gene sequence:
>1338_bases ATGTATCGAACTGCAATAGAAGAGCTTAGGAAGTGGAAGTCGTCAGAATACCGCAAACCGCTGATCGTAAACGGGGTCAG GCAGGTAGGTAAAACCTGGCTGCTCAAAGAGTTCGGCAGGCAAAATTATCAGAACACCGTGTATGTCAACTTTGAGGAAA ATCCCGAATACAAATCGTTCTTCGACACCACAAAAGACATAGAAAGAATTCTCCCGAATCTCGCCGTTGCCAAAAAACAG ACGATACAGCCCGGGAACACCCTCATTATCTTTGATGAGATCCAGGAGTGTCCGGATGCCTTGAATTCTCTCAAATATTT TTATGAGAACGGTCCGGAGTATCATATCGTGTGTGCCGGTTCACTTCTCGGCGTTGCCCTCTCCAGGCCGACCTCATTTC CTGTGGGAAAAGTTGAGTTTTTCACTCTCCGCCCCATGACCTTTTCCGAGTTTCTGATCGCCGTCGGAGATGAAAATCTG GCTTCCTATCTTGACGGCATCCGGGAGATCGAACCAATACCGGAGGCATTTTTCGGTCCGCTCTGCGAGAAGCTGAAGAT GTATTATATTATTGGAGGCATGCCTGAAGCAGTGTATGCGTGGACGAAGGAGCATGACATAAATCAGGTCCGTAAAATCC AGCAAAATATCCTGAATGCCTATACCCGCGATTTTGCAAAACACATTCAGCCGTTGTCGGATGTTCCCAAAGTCATGTAT ATCTGGGAATCTATCCCCTCTCAGCTGGCAAAAGAAAACAGGAAGTTTCTGTATAATGTGGTGAAGGAAGGGGCACGGGC GCGGGAGTATGAGAACGCTCTTCAATGGCTTTGCGATGCGAATCTCTTGCGCAAAGTGTATCGTCTGCGTTCCCCGGAAC TGCCGATATCATCTCAGAAGGATCTCTCCGCTTTCAAAATTTATCTGGCTGATGTCGGCCTGCTTGGCTGTATGTCGGTC CTTGATCCTTCTGTCATTGCAGAGGGGGATGAAGTGTTCAGCACGTTTAAGGGTGCATTGGCGGAGAATTATGTTCTGGA AGCGATCATTGGGCAGTTTGACGGATCGCCTGGATATATGTCGTCGTTGAATCCAAAGTTTGAGATCGATTTTATTGTCC AGCGGAAAAATCTGATTATCCCAATAGAAGTGAAATCCGACCGGAATGTTACGGGGAAGAGTCTGAAAAAATATAAAGAG CTGTACGGCGATTCGGTCAAAGTCCGTGTCAGATATTCTCTGTTGAATCTGAAGCTGGATGATGATGTGTTGAATATTCC TTTGTTCATGGCCGATCATTCCGCACGGCTTGTTGATCTTGTCCTTGGAAAAGAATAA
Upstream 100 bases:
>100_bases TCTGAGTACCCATAAAAAATAAGTTGTGGGTTTCATCACATAATTTGTGAAAATAATGTGATGTACATCACATAATTTTC AGTCTGCTTGGGAGAAGAAG
Downstream 100 bases:
>100_bases GAGAAAAAAATAAACATGGTTCTCTCTGCCTTGCGGGCTACTCTTTGCTTTGCGAGTTGTCGGGGACAGGTGTTCGTTTT TTCCACATTTTGTCGGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: AAA+ Superfamily ATPase; ATPase-Like Protein; AAA Family ATPase; NERD Domain Protein
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MYRTAIEELRKWKSSEYRKPLIVNGVRQVGKTWLLKEFGRQNYQNTVYVNFEENPEYKSFFDTTKDIERILPNLAVAKKQ TIQPGNTLIIFDEIQECPDALNSLKYFYENGPEYHIVCAGSLLGVALSRPTSFPVGKVEFFTLRPMTFSEFLIAVGDENL ASYLDGIREIEPIPEAFFGPLCEKLKMYYIIGGMPEAVYAWTKEHDINQVRKIQQNILNAYTRDFAKHIQPLSDVPKVMY IWESIPSQLAKENRKFLYNVVKEGARAREYENALQWLCDANLLRKVYRLRSPELPISSQKDLSAFKIYLADVGLLGCMSV LDPSVIAEGDEVFSTFKGALAENYVLEAIIGQFDGSPGYMSSLNPKFEIDFIVQRKNLIIPIEVKSDRNVTGKSLKKYKE LYGDSVKVRVRYSLLNLKLDDDVLNIPLFMADHSARLVDLVLGKE
Sequences:
>Translated_445_residues MYRTAIEELRKWKSSEYRKPLIVNGVRQVGKTWLLKEFGRQNYQNTVYVNFEENPEYKSFFDTTKDIERILPNLAVAKKQ TIQPGNTLIIFDEIQECPDALNSLKYFYENGPEYHIVCAGSLLGVALSRPTSFPVGKVEFFTLRPMTFSEFLIAVGDENL ASYLDGIREIEPIPEAFFGPLCEKLKMYYIIGGMPEAVYAWTKEHDINQVRKIQQNILNAYTRDFAKHIQPLSDVPKVMY IWESIPSQLAKENRKFLYNVVKEGARAREYENALQWLCDANLLRKVYRLRSPELPISSQKDLSAFKIYLADVGLLGCMSV LDPSVIAEGDEVFSTFKGALAENYVLEAIIGQFDGSPGYMSSLNPKFEIDFIVQRKNLIIPIEVKSDRNVTGKSLKKYKE LYGDSVKVRVRYSLLNLKLDDDVLNIPLFMADHSARLVDLVLGKE >Mature_445_residues MYRTAIEELRKWKSSEYRKPLIVNGVRQVGKTWLLKEFGRQNYQNTVYVNFEENPEYKSFFDTTKDIERILPNLAVAKKQ TIQPGNTLIIFDEIQECPDALNSLKYFYENGPEYHIVCAGSLLGVALSRPTSFPVGKVEFFTLRPMTFSEFLIAVGDENL ASYLDGIREIEPIPEAFFGPLCEKLKMYYIIGGMPEAVYAWTKEHDINQVRKIQQNILNAYTRDFAKHIQPLSDVPKVMY IWESIPSQLAKENRKFLYNVVKEGARAREYENALQWLCDANLLRKVYRLRSPELPISSQKDLSAFKIYLADVGLLGCMSV LDPSVIAEGDEVFSTFKGALAENYVLEAIIGQFDGSPGYMSSLNPKFEIDFIVQRKNLIIPIEVKSDRNVTGKSLKKYKE LYGDSVKVRVRYSLLNLKLDDDVLNIPLFMADHSARLVDLVLGKE
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51003; Mature: 51003
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRTAIEELRKWKSSEYRKPLIVNGVRQVGKTWLLKEFGRQNYQNTVYVNFEENPEYKSF CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH FDTTKDIERILPNLAVAKKQTIQPGNTLIIFDEIQECPDALNSLKYFYENGPEYHIVCAG HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECC SLLGVALSRPTSFPVGKVEFFTLRPMTFSEFLIAVGDENLASYLDGIREIEPIPEAFFGP HHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHH LCEKLKMYYIIGGMPEAVYAWTKEHDINQVRKIQQNILNAYTRDFAKHIQPLSDVPKVMY HHHHHEEHEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHH IWESIPSQLAKENRKFLYNVVKEGARAREYENALQWLCDANLLRKVYRLRSPELPISSQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DLSAFKIYLADVGLLGCMSVLDPSVIAEGDEVFSTFKGALAENYVLEAIIGQFDGSPGYM CHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SSLNPKFEIDFIVQRKNLIIPIEVKSDRNVTGKSLKKYKELYGDSVKVRVRYSLLNLKLD CCCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEEC DDVLNIPLFMADHSARLVDLVLGKE CCCEECEEEEECCCCHHHHHCCCCC >Mature Secondary Structure MYRTAIEELRKWKSSEYRKPLIVNGVRQVGKTWLLKEFGRQNYQNTVYVNFEENPEYKSF CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH FDTTKDIERILPNLAVAKKQTIQPGNTLIIFDEIQECPDALNSLKYFYENGPEYHIVCAG HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECC SLLGVALSRPTSFPVGKVEFFTLRPMTFSEFLIAVGDENLASYLDGIREIEPIPEAFFGP HHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHH LCEKLKMYYIIGGMPEAVYAWTKEHDINQVRKIQQNILNAYTRDFAKHIQPLSDVPKVMY HHHHHEEHEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHH IWESIPSQLAKENRKFLYNVVKEGARAREYENALQWLCDANLLRKVYRLRSPELPISSQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DLSAFKIYLADVGLLGCMSVLDPSVIAEGDEVFSTFKGALAENYVLEAIIGQFDGSPGYM CHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SSLNPKFEIDFIVQRKNLIIPIEVKSDRNVTGKSLKKYKELYGDSVKVRVRYSLLNLKLD CCCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEEC DDVLNIPLFMADHSARLVDLVLGKE CCCEECEEEEECCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA