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The map label for this gene is 124485993

Identifier: 124485993

GI number: 124485993

Start: 1195887

End: 1196420

Strand: Reverse

Name: 124485993

Synonym: Mlab_1173

Alternate gene names: NA

Gene position: 1196420-1195887 (Counterclockwise)

Preceding gene: 124485997

Following gene: 124485992

Centisome position: 66.29

GC content: 56.74

Gene sequence:

>534_bases
ATGAGCGAGTATATCATGCAGACAGAATATTGTGAGTTATGCGGGGTAGCACTGAGTAAGAAAGGCAAACTGGTGCAGAT
CGAGGGAGCAAAGCCGATGAGAGTCTGCGACAAGTGCGCCAAGCTTGGGACCGAGGTCCAGGCACCGCGTGCTCCGGTCC
AGTCGTTCGGCCGCCCGGTCATTACGACCAAGGCCAAGTCGCCGTCCCAGGCCAGTCAGCAGGCGAACCGCAAGCGGGAT
ATGTTCGATTTCATCGAGGGCGATATCGTGGAGGATTACCCCCAGCGGATCGCATCGGCCCGTCTTGCCAAAGGCTATAC
CCAGAAGGATCTTGCCTTCATTTTGAAGATGCAGGAAGGAGACATCAAGAAGTTCGAACGCGGCGAGCGTGCCCCGACAG
AGGCAGAACGCAAGAAGCTCGAAAAGGAGCTCGGCATCGTTCTTCTGGATGTGTCCGATGACGACGACAAGCTTCAGGCA
GGCGGCGTCGCATCCACCACGCTCGGCGATGTTCTTCAGGTGAAGAGGAAGTAA

Upstream 100 bases:

>100_bases
CGGATTTTTTCCCGCAGTTTTCGCCCTCATTTCCGTCCATTCACCGACAGAGAGTATTGCCGGATAGGAAAAGGGTTAAT
GTATGCGAGGGAAAATATAG

Downstream 100 bases:

>100_bases
TGTCGTCTCCGCTTATCCTGGTGAACTTCAAGTCATACCGCGAAGGAGCGGGCAATGCGGCAGGACAGATAGCTTCGGCC
GCCGAACTTGTGATGCAGGA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSEYIMQTEYCELCGVALSKKGKLVQIEGAKPMRVCDKCAKLGTEVQAPRAPVQSFGRPVITTKAKSPSQASQQANRKRD
MFDFIEGDIVEDYPQRIASARLAKGYTQKDLAFILKMQEGDIKKFERGERAPTEAERKKLEKELGIVLLDVSDDDDKLQA
GGVASTTLGDVLQVKRK

Sequences:

>Translated_177_residues
MSEYIMQTEYCELCGVALSKKGKLVQIEGAKPMRVCDKCAKLGTEVQAPRAPVQSFGRPVITTKAKSPSQASQQANRKRD
MFDFIEGDIVEDYPQRIASARLAKGYTQKDLAFILKMQEGDIKKFERGERAPTEAERKKLEKELGIVLLDVSDDDDKLQA
GGVASTTLGDVLQVKRK
>Mature_176_residues
SEYIMQTEYCELCGVALSKKGKLVQIEGAKPMRVCDKCAKLGTEVQAPRAPVQSFGRPVITTKAKSPSQASQQANRKRDM
FDFIEGDIVEDYPQRIASARLAKGYTQKDLAFILKMQEGDIKKFERGERAPTEAERKKLEKELGIVLLDVSDDDDKLQAG
GVASTTLGDVLQVKRK

Specific function: Unknown

COG id: COG1813

COG function: function code K; Predicted transcription factor, homolog of eukaryotic MBF1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004451
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 19656; Mature: 19525

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEYIMQTEYCELCGVALSKKGKLVQIEGAKPMRVCDKCAKLGTEVQAPRAPVQSFGRPV
CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCE
ITTKAKSPSQASQQANRKRDMFDFIEGDIVEDYPQRIASARLAKGYTQKDLAFILKMQEG
EEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
DIKKFERGERAPTEAERKKLEKELGIVLLDVSDDDDKLQAGGVASTTLGDVLQVKRK
CHHHHHCCCCCCCHHHHHHHHHHHCEEEEECCCCCCHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SEYIMQTEYCELCGVALSKKGKLVQIEGAKPMRVCDKCAKLGTEVQAPRAPVQSFGRPV
CCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCE
ITTKAKSPSQASQQANRKRDMFDFIEGDIVEDYPQRIASARLAKGYTQKDLAFILKMQEG
EEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
DIKKFERGERAPTEAERKKLEKELGIVLLDVSDDDDKLQAGGVASTTLGDVLQVKRK
CHHHHHCCCCCCCHHHHHHHHHHHCEEEEECCCCCCHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]