| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485967
Identifier: 124485967
GI number: 124485967
Start: 1163236
End: 1163835
Strand: Reverse
Name: 124485967
Synonym: Mlab_1147
Alternate gene names: NA
Gene position: 1163835-1163236 (Counterclockwise)
Preceding gene: 124485971
Following gene: 124485966
Centisome position: 64.48
GC content: 53.17
Gene sequence:
>600_bases ATGCAAATGCTTATGACATTTCCTCGTGCACATAATATTTCAATGGCTCTGGAAATAGAGATAAAAGTCAAGGTCCCCTC GCTTGATCCGATCCGGGAAAAACTCATCGCAAGCGGAGCGGAACTGATAGCCGACCAGGTAGAGCATGATCTGTATTATA ATGCTCCCCACCGGGATTTTGCCGTGACCGACGAAGCGCTCAGGATCCGGTACCTGACCAACCAGATCTGCGGGAAAGCC ATGCCGCCGAACGTGACCTACAAGGGTCCAAAAGTCGGCCGCGAGGGTTTCAAATCCAGAGAAGAACTCATCGTTGACCT CTCCTCGGCCGAAGAATACTGCACGATCCTCGAGCGGCTCGGATTTTGTCTGACCGCCGAGGTCGTCAAACACCGGGAGA TGTATCAGTGCGAGAATGCGCTCGTCACGCTGGACACGCTGCCTGGGATTGGGACCTTCTCGGAGATCGAAGCCTCCTTC GACCTTTCCGAGGACGAGGCGATCGCAGTTATCAATAAAACGGCAGAGATGGCAGGAATCGTCGGCGAACGTCTGACAAA ATCCTATCTCGAGATCCTGCTGGACTCCAGAAAAACCTGA
Upstream 100 bases:
>100_bases GCGACAAAGAGGACCGCGAGAAGGCCGAGTAAAACTATCAGCTTTTTCATGTAACGTTTATCTTACTTTTATCGTATAAT AAGTTCCCGCCGTGTCAAAT
Downstream 100 bases:
>100_bases ATATCAAAAACATGACCCCTCAGCCGCCTGAGATATTCGTCGATCCTGCATCCGTGTACGTCGTGATGATCAACGAAGTT GTCCCAAAAGATCCCAAAGA
Product: hypothetical protein
Products: 3',5'-cyclic AMP; diphosphate
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MQMLMTFPRAHNISMALEIEIKVKVPSLDPIREKLIASGAELIADQVEHDLYYNAPHRDFAVTDEALRIRYLTNQICGKA MPPNVTYKGPKVGREGFKSREELIVDLSSAEEYCTILERLGFCLTAEVVKHREMYQCENALVTLDTLPGIGTFSEIEASF DLSEDEAIAVINKTAEMAGIVGERLTKSYLEILLDSRKT
Sequences:
>Translated_199_residues MQMLMTFPRAHNISMALEIEIKVKVPSLDPIREKLIASGAELIADQVEHDLYYNAPHRDFAVTDEALRIRYLTNQICGKA MPPNVTYKGPKVGREGFKSREELIVDLSSAEEYCTILERLGFCLTAEVVKHREMYQCENALVTLDTLPGIGTFSEIEASF DLSEDEAIAVINKTAEMAGIVGERLTKSYLEILLDSRKT >Mature_199_residues MQMLMTFPRAHNISMALEIEIKVKVPSLDPIREKLIASGAELIADQVEHDLYYNAPHRDFAVTDEALRIRYLTNQICGKA MPPNVTYKGPKVGREGFKSREELIVDLSSAEEYCTILERLGFCLTAEVVKHREMYQCENALVTLDTLPGIGTFSEIEASF DLSEDEAIAVINKTAEMAGIVGERLTKSYLEILLDSRKT
Specific function: Unknown
COG id: COG1437
COG function: function code F; Adenylate cyclase, class 2 (thermophilic)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008172 - InterPro: IPR008173 - InterPro: IPR004206 [H]
Pfam domain/function: PF01928 CYTH [H]
EC number: 4.6.1.1
Molecular weight: Translated: 22343; Mature: 22343
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMLMTFPRAHNISMALEIEIKVKVPSLDPIREKLIASGAELIADQVEHDLYYNAPHRDF CCCEECCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCC AVTDEALRIRYLTNQICGKAMPPNVTYKGPKVGREGFKSREELIVDLSSAEEYCTILERL EECHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHCCHHHHEEECCCHHHHHHHHHHH GFCLTAEVVKHREMYQCENALVTLDTLPGIGTFSEIEASFDLSEDEAIAVINKTAEMAGI HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEHHHHHHHHH VGERLTKSYLEILLDSRKT HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQMLMTFPRAHNISMALEIEIKVKVPSLDPIREKLIASGAELIADQVEHDLYYNAPHRDF CCCEECCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCC AVTDEALRIRYLTNQICGKAMPPNVTYKGPKVGREGFKSREELIVDLSSAEEYCTILERL EECHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHCCHHHHEEECCCHHHHHHHHHHH GFCLTAEVVKHREMYQCENALVTLDTLPGIGTFSEIEASFDLSEDEAIAVINKTAEMAGI HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEHHHHHHHHH VGERLTKSYLEILLDSRKT HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP
Specific reaction: ATP = 3',5'-cyclic AMP + diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]