Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485966

Identifier: 124485966

GI number: 124485966

Start: 1162670

End: 1163224

Strand: Reverse

Name: 124485966

Synonym: Mlab_1146

Alternate gene names: NA

Gene position: 1163224-1162670 (Counterclockwise)

Preceding gene: 124485967

Following gene: 124485964

Centisome position: 64.45

GC content: 50.81

Gene sequence:

>555_bases
ATGACCCCTCAGCCGCCTGAGATATTCGTCGATCCTGCATCCGTGTACGTCGTGATGATCAACGAAGTTGTCCCAAAAGA
TCCCAAAGAGGATTTTTACGGAAGCGCAGGGGCCTCGTATGCAGAGTCGGCGATCGCGTTGTTCCGGCAGGCGGGCGTTG
ATGTTTCCTCTGTTTCGGATCTCCTCGACCGCGGGATCTATCTTACAAACGCGGTAAAATATCCTAAAACCGGATACGCC
GTGGAACTATCCGCGATAAAACGCAGTCTGCCGCTGCTGGAGGAAGAGCTTTCCCGCTTCCCCAATCTCCGCGTTGTCAT
GCTCATGGGCGATACGGCAAAAAAGTCGTTCAATACGATCGCAAAAAAGCAGACCGGTAAAAACTGCATCCCGTCCGGTG
CGACCTACAAACTGCGGGCCGGCGAGTTCTATTTTGGAAACGTGCGGGTTATCCCATCGTATATCATGACCGGCGGGAAT
CTTCTGATCGAGAAATCCAAGACCCAAATGATCACTGAAGATATAAAAAAGATGATGGAGATTATTCTTTCGTGA

Upstream 100 bases:

>100_bases
TCAATAAAACGGCAGAGATGGCAGGAATCGTCGGCGAACGTCTGACAAAATCCTATCTCGAGATCCTGCTGGACTCCAGA
AAAACCTGAATATCAAAAAC

Downstream 100 bases:

>100_bases
CTTCTATTGGGTCGCTGATGTTTTTCAGCACGATTTTTGGTTCGTCCTCATCATCATCCAGTGTGATGAGTGCATAATTC
CCATCGTATGCCGGCCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MTPQPPEIFVDPASVYVVMINEVVPKDPKEDFYGSAGASYAESAIALFRQAGVDVSSVSDLLDRGIYLTNAVKYPKTGYA
VELSAIKRSLPLLEEELSRFPNLRVVMLMGDTAKKSFNTIAKKQTGKNCIPSGATYKLRAGEFYFGNVRVIPSYIMTGGN
LLIEKSKTQMITEDIKKMMEIILS

Sequences:

>Translated_184_residues
MTPQPPEIFVDPASVYVVMINEVVPKDPKEDFYGSAGASYAESAIALFRQAGVDVSSVSDLLDRGIYLTNAVKYPKTGYA
VELSAIKRSLPLLEEELSRFPNLRVVMLMGDTAKKSFNTIAKKQTGKNCIPSGATYKLRAGEFYFGNVRVIPSYIMTGGN
LLIEKSKTQMITEDIKKMMEIILS
>Mature_183_residues
TPQPPEIFVDPASVYVVMINEVVPKDPKEDFYGSAGASYAESAIALFRQAGVDVSSVSDLLDRGIYLTNAVKYPKTGYAV
ELSAIKRSLPLLEEELSRFPNLRVVMLMGDTAKKSFNTIAKKQTGKNCIPSGATYKLRAGEFYFGNVRVIPSYIMTGGNL
LIEKSKTQMITEDIKKMMEIILS

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20301; Mature: 20170

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPQPPEIFVDPASVYVVMINEVVPKDPKEDFYGSAGASYAESAIALFRQAGVDVSSVSD
CCCCCCEEEECCHHEEEEEECHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH
LLDRGIYLTNAVKYPKTGYAVELSAIKRSLPLLEEELSRFPNLRVVMLMGDTAKKSFNTI
HHHCCEEEECCCCCCCCCCEEEHHHHHHHCCHHHHHHHHCCCCEEEEEECCCHHHHHHHH
AKKQTGKNCIPSGATYKLRAGEFYFGNVRVIPSYIMTGGNLLIEKSKTQMITEDIKKMME
HHHHCCCCCCCCCCEEEEECCEEEECCEEEEEHHHHCCCCEEEECCHHHHHHHHHHHHHH
IILS
HHCC
>Mature Secondary Structure 
TPQPPEIFVDPASVYVVMINEVVPKDPKEDFYGSAGASYAESAIALFRQAGVDVSSVSD
CCCCCEEEECCHHEEEEEECHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH
LLDRGIYLTNAVKYPKTGYAVELSAIKRSLPLLEEELSRFPNLRVVMLMGDTAKKSFNTI
HHHCCEEEECCCCCCCCCCEEEHHHHHHHCCHHHHHHHHCCCCEEEEEECCCHHHHHHHH
AKKQTGKNCIPSGATYKLRAGEFYFGNVRVIPSYIMTGGNLLIEKSKTQMITEDIKKMME
HHHHCCCCCCCCCCEEEEECCEEEECCEEEEEHHHHCCCCEEEECCHHHHHHHHHHHHHH
IILS
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA