| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is hisC
Identifier: 124485948
GI number: 124485948
Start: 1141480
End: 1142535
Strand: Reverse
Name: hisC
Synonym: Mlab_1128
Alternate gene names: 124485948
Gene position: 1142535-1141480 (Counterclockwise)
Preceding gene: 124485949
Following gene: 124485947
Centisome position: 63.3
GC content: 55.11
Gene sequence:
>1056_bases ATGAAGCCGCGGGTCAGATCTGAGTTCGTCAAATCAGGCTACGTCTTTGCAAAATCCCCGGCCGATATCGCAAAGGAATA CGGGTTCACCGAAGTTGCCATGCTCGGCAGCAACGAAAACCCCTACCCTCCTTCGGACAAGGTCCTTCGGGCAGCAGAAG CTGAGCTTTCAGGCGTAAACCGGTATCCGGATCCAAAAGCCGCCGCATTTCACGCCGCGCTCCGTACATACATCTGCGAT TGCCCCGTCGTTACGTCTGGACTCGGTATGGACGGCGTTATCGAGACCGTGATTCGAACGATCGTCGAGCCGGGTGACAA AGTTGTCATCTCCACGCCGACCTTCTCTATGTACGGCCTTGCAGCAAAGGCCGCATCTGCCCGTGTGGTCAATGTCTCGC GAAGCGCCGACTTCTCGGTCGATCTCGACACATTCCTGAACGAAGCCAAAGATGCACGTCTTTCGTTCCTCTGCACGCCG AACAATCCAACAGGGACCGTGACCCCGGTTGAGGACATTGAATATATTCTCGATAGGATCGAGGGAGTTTTATTCCTGGA TTGTGCCTACGTAGAGTTTTCAGACATCAACTATCTGCCGCTTCTTTCCCGCGACAACCTGATCATCGGCCGGACCATGT CCAAAGTGTATGGTCTTGCAGGTCTTCGGATCGGCTACGCATTCGTCCCGGAATGGCTGGAGGCTCCCTATAATATTGCC GCCACGCCGTTCACGATGAATCGTCTTTCTGAAGCCGCGGCCTCCGTGGCCGTTTCAGATGCCGCCTACCGCGAATCATT CATCGCCCATGTTCAAAAATGGCGGGATGTTTTCATGCAGGAGATCCCGTTCCCGGTTTACCCAAGCGGGTCGAACTTCA TACTCATCAATGTCGCCCCGCAGAAAGGCGACGCTGCGGCCGAATCCCTGGCAAAACACGGCGTGCTGGTTCGTTCCTGT ACCAGTTTCCCGGGTCTTGGAGATACGTTCATTCGCGTAAGCGTAGGTGCCGACTGGGAGAACGAGCGGTTCCTCGCTGC GGTGAAAAAACTATGA
Upstream 100 bases:
>100_bases AAGGGCGTTCTCATCAATGTTGCCGGTGACGGCAACATCAGGATCGTCCCGCCTCTGACAATCTCGGCCGACGAAATCAA CTATGCAGTCGGAGTGATCA
Downstream 100 bases:
>100_bases TGATCGGGATCACCGGAACCCCGGGATGTGGGAAGACGACCGTCGCAGACCTCCTTCGGGATATGGGGTATCCGGTTCTC GATCTGAAAACCACCGTCGG
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKPRVRSEFVKSGYVFAKSPADIAKEYGFTEVAMLGSNENPYPPSDKVLRAAEAELSGVNRYPDPKAAAFHAALRTYICD CPVVTSGLGMDGVIETVIRTIVEPGDKVVISTPTFSMYGLAAKAASARVVNVSRSADFSVDLDTFLNEAKDARLSFLCTP NNPTGTVTPVEDIEYILDRIEGVLFLDCAYVEFSDINYLPLLSRDNLIIGRTMSKVYGLAGLRIGYAFVPEWLEAPYNIA ATPFTMNRLSEAAASVAVSDAAYRESFIAHVQKWRDVFMQEIPFPVYPSGSNFILINVAPQKGDAAAESLAKHGVLVRSC TSFPGLGDTFIRVSVGADWENERFLAAVKKL
Sequences:
>Translated_351_residues MKPRVRSEFVKSGYVFAKSPADIAKEYGFTEVAMLGSNENPYPPSDKVLRAAEAELSGVNRYPDPKAAAFHAALRTYICD CPVVTSGLGMDGVIETVIRTIVEPGDKVVISTPTFSMYGLAAKAASARVVNVSRSADFSVDLDTFLNEAKDARLSFLCTP NNPTGTVTPVEDIEYILDRIEGVLFLDCAYVEFSDINYLPLLSRDNLIIGRTMSKVYGLAGLRIGYAFVPEWLEAPYNIA ATPFTMNRLSEAAASVAVSDAAYRESFIAHVQKWRDVFMQEIPFPVYPSGSNFILINVAPQKGDAAAESLAKHGVLVRSC TSFPGLGDTFIRVSVGADWENERFLAAVKKL >Mature_351_residues MKPRVRSEFVKSGYVFAKSPADIAKEYGFTEVAMLGSNENPYPPSDKVLRAAEAELSGVNRYPDPKAAAFHAALRTYICD CPVVTSGLGMDGVIETVIRTIVEPGDKVVISTPTFSMYGLAAKAASARVVNVSRSADFSVDLDTFLNEAKDARLSFLCTP NNPTGTVTPVEDIEYILDRIEGVLFLDCAYVEFSDINYLPLLSRDNLIIGRTMSKVYGLAGLRIGYAFVPEWLEAPYNIA ATPFTMNRLSEAAASVAVSDAAYRESFIAHVQKWRDVFMQEIPFPVYPSGSNFILINVAPQKGDAAAESLAKHGVLVRSC TSFPGLGDTFIRVSVGADWENERFLAAVKKL
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=332, Percent_Identity=28.3132530120482, Blast_Score=103, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6322075, Length=365, Percent_Identity=29.041095890411, Blast_Score=109, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_METLZ (A2SSJ1)
Other databases:
- EMBL: CP000559 - RefSeq: YP_001030564.1 - ProteinModelPortal: A2SSJ1 - SMR: A2SSJ1 - STRING: A2SSJ1 - GeneID: 4795647 - GenomeReviews: CP000559_GR - KEGG: mla:Mlab_1128 - eggNOG: arNOG04897 - HOGENOM: HBG646350 - OMA: MSARYHH - ProtClustDB: PRK00950 - BioCyc: MLAB410358:MLAB_1128-MONOMER - HAMAP: MF_01023 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 38283; Mature: 38283
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPRVRSEFVKSGYVFAKSPADIAKEYGFTEVAMLGSNENPYPPSDKVLRAAEAELSGVN CCCCHHHHHHHCCEEEECCHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC RYPDPKAAAFHAALRTYICDCPVVTSGLGMDGVIETVIRTIVEPGDKVVISTPTFSMYGL CCCCHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHH AAKAASARVVNVSRSADFSVDLDTFLNEAKDARLSFLCTPNNPTGTVTPVEDIEYILDRI HHHHCCEEEEEECCCCCCEEEHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH EGVLFLDCAYVEFSDINYLPLLSRDNLIIGRTMSKVYGLAGLRIGYAFVPEWLEAPYNIA CCEEEEEEEEEEECCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCHHHCCCCCEE ATPFTMNRLSEAAASVAVSDAAYRESFIAHVQKWRDVFMQEIPFPVYPSGSNFILINVAP ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC QKGDAAAESLAKHGVLVRSCTSFPGLGDTFIRVSVGADWENERFLAAVKKL CCCCHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHCC >Mature Secondary Structure MKPRVRSEFVKSGYVFAKSPADIAKEYGFTEVAMLGSNENPYPPSDKVLRAAEAELSGVN CCCCHHHHHHHCCEEEECCHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC RYPDPKAAAFHAALRTYICDCPVVTSGLGMDGVIETVIRTIVEPGDKVVISTPTFSMYGL CCCCHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHH AAKAASARVVNVSRSADFSVDLDTFLNEAKDARLSFLCTPNNPTGTVTPVEDIEYILDRI HHHHCCEEEEEECCCCCCEEEHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH EGVLFLDCAYVEFSDINYLPLLSRDNLIIGRTMSKVYGLAGLRIGYAFVPEWLEAPYNIA CCEEEEEEEEEEECCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCHHHCCCCCEE ATPFTMNRLSEAAASVAVSDAAYRESFIAHVQKWRDVFMQEIPFPVYPSGSNFILINVAP ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC QKGDAAAESLAKHGVLVRSCTSFPGLGDTFIRVSVGADWENERFLAAVKKL CCCCHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA