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The map label for this gene is 124485929

Identifier: 124485929

GI number: 124485929

Start: 1119757

End: 1120860

Strand: Reverse

Name: 124485929

Synonym: Mlab_1109

Alternate gene names: NA

Gene position: 1120860-1119757 (Counterclockwise)

Preceding gene: 124485930

Following gene: 124485928

Centisome position: 62.1

GC content: 52.63

Gene sequence:

>1104_bases
ATGACGGCAGCTACAAGATTCATATCAATAAACGGAAGGCCTGTCAAAACCCCCATCGTGATCGCTTCAATGGCCGGAAT
AACCGATGCGGAGTTTGTTCTTGCCCGCAGTAAACATGCCGGTGTTGCTTTTATTGGCGGATACAATACAGATGAACCAA
GCAGGAAAGCCTCTGTTGCTATGGAAGCAGCGGGCCGGACCGAGTTCAATGCCGATTTCGACGAAATAGCAACCGAGATC
GACATTCTGGAAGGGGCGGATATCATCATCGGTCTCAATCTGAGAGGGGCGACGCCGGAAGCATTCGTTTCTGCCGCAAA
ACGGTTTGGACCTTCTGTAATATACGAGATCGATGCCCACTGCCGTCAGCAGCCCATGATCGACGCAGGATGCGGAGAGT
ATCTCCTTCACAATCCTGAGAAACTCTGTGCCATCGTTTCTGCGCTTGCAGCCGAAGGCATGACCGTCTCCGTCAAGACC
CGTGCCGGCGTGGTTGATGACCGCCAGCTTGCACGCATGCTCTGGAAAGCCGGAGCTTCGATTCTCCATGTCGATCTGAT
GGATACCGGACACACGAAGATCAGACAGATTCGAAACAGCTGCCCCTTAATCATCATCGCAAACAACGGTGTTTCCAGTC
CCGACAAAATGATGGACTATTTTGCCCACGGGGCCGATCTCGTCTCGGTCGCACGAAGTGCAAGTCTCAGCGTTCTTCAG
ACACTTGACCGGTATATCCGGGCGGTCGCCGAAGAGATCGGCTGGTATAATGCCCCCAAACAGCTGTGCCGCGGAGGAGA
TCTCCGTTCGCTCACGTTCTGCTGCATGCCGGTGAAACAGTGCCCGCTTCTTCCCTCTCTCGAGTCGCTTGGGATGAGCC
GGGAGGAGTATCTCGCATTGAAAAAGGAAATGACTGCCGAGACTCCTCTTTCCATGGGCAGCCACACCTGTTTCGGCAGT
CTTGCCTACTGCTGTAAGTCTTCGACCCCCTGTATGTTCCGGGATATGACGCTGAAGTCGATCGATCTCCCGATGAATGA
ATATATGGCTCTGAAACGTACGCTTTCTGAGAAGATCGTGAAGAAAATCTTTGAAAATGTCTAA

Upstream 100 bases:

>100_bases
AGAAGATGCATTCCGCTCGAACGGGTCTCTGGCGGGTACCGTCTTTCCTGTCTCAATCCATCAGAGTAATTAGGAGTGAA
AACCAAATAATATAAAATTC

Downstream 100 bases:

>100_bases
GCTGTCTCTTGCCGAAACCGCCGAACTTTCGATGCTCCTTGAGGTGAGCGCCAATATCAAACCGGGAAATATCGACCGGT
TCCATGATTACGAGGATACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTAATRFISINGRPVKTPIVIASMAGITDAEFVLARSKHAGVAFIGGYNTDEPSRKASVAMEAAGRTEFNADFDEIATEI
DILEGADIIIGLNLRGATPEAFVSAAKRFGPSVIYEIDAHCRQQPMIDAGCGEYLLHNPEKLCAIVSALAAEGMTVSVKT
RAGVVDDRQLARMLWKAGASILHVDLMDTGHTKIRQIRNSCPLIIIANNGVSSPDKMMDYFAHGADLVSVARSASLSVLQ
TLDRYIRAVAEEIGWYNAPKQLCRGGDLRSLTFCCMPVKQCPLLPSLESLGMSREEYLALKKEMTAETPLSMGSHTCFGS
LAYCCKSSTPCMFRDMTLKSIDLPMNEYMALKRTLSEKIVKKIFENV

Sequences:

>Translated_367_residues
MTAATRFISINGRPVKTPIVIASMAGITDAEFVLARSKHAGVAFIGGYNTDEPSRKASVAMEAAGRTEFNADFDEIATEI
DILEGADIIIGLNLRGATPEAFVSAAKRFGPSVIYEIDAHCRQQPMIDAGCGEYLLHNPEKLCAIVSALAAEGMTVSVKT
RAGVVDDRQLARMLWKAGASILHVDLMDTGHTKIRQIRNSCPLIIIANNGVSSPDKMMDYFAHGADLVSVARSASLSVLQ
TLDRYIRAVAEEIGWYNAPKQLCRGGDLRSLTFCCMPVKQCPLLPSLESLGMSREEYLALKKEMTAETPLSMGSHTCFGS
LAYCCKSSTPCMFRDMTLKSIDLPMNEYMALKRTLSEKIVKKIFENV
>Mature_366_residues
TAATRFISINGRPVKTPIVIASMAGITDAEFVLARSKHAGVAFIGGYNTDEPSRKASVAMEAAGRTEFNADFDEIATEID
ILEGADIIIGLNLRGATPEAFVSAAKRFGPSVIYEIDAHCRQQPMIDAGCGEYLLHNPEKLCAIVSALAAEGMTVSVKTR
AGVVDDRQLARMLWKAGASILHVDLMDTGHTKIRQIRNSCPLIIIANNGVSSPDKMMDYFAHGADLVSVARSASLSVLQT
LDRYIRAVAEEIGWYNAPKQLCRGGDLRSLTFCCMPVKQCPLLPSLESLGMSREEYLALKKEMTAETPLSMGSHTCFGSL
AYCCKSSTPCMFRDMTLKSIDLPMNEYMALKRTLSEKIVKKIFENV

Specific function: Unknown

COG id: COG0042

COG function: function code J; tRNA-dihydrouridine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017671 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40004; Mature: 39873

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAATRFISINGRPVKTPIVIASMAGITDAEFVLARSKHAGVAFIGGYNTDEPSRKASVA
CCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHEECCCCCEEEECCCCCCCCCHHHHHH
MEAAGRTEFNADFDEIATEIDILEGADIIIGLNLRGATPEAFVSAAKRFGPSVIYEIDAH
HHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECHH
CRQQPMIDAGCGEYLLHNPEKLCAIVSALAAEGMTVSVKTRAGVVDDRQLARMLWKAGAS
HCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCC
ILHVDLMDTGHTKIRQIRNSCPLIIIANNGVSSPDKMMDYFAHGADLVSVARSASLSVLQ
EEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
TLDRYIRAVAEEIGWYNAPKQLCRGGDLRSLTFCCMPVKQCPLLPSLESLGMSREEYLAL
HHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHEECCHHHCCCCCCHHHHCCCHHHHHHH
KKEMTAETPLSMGSHTCFGSLAYCCKSSTPCMFRDMTLKSIDLPMNEYMALKRTLSEKIV
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCHHHCCCCHHHHHHHHHHHHHHHH
KKIFENV
HHHHHCC
>Mature Secondary Structure 
TAATRFISINGRPVKTPIVIASMAGITDAEFVLARSKHAGVAFIGGYNTDEPSRKASVA
CCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHEECCCCCEEEECCCCCCCCCHHHHHH
MEAAGRTEFNADFDEIATEIDILEGADIIIGLNLRGATPEAFVSAAKRFGPSVIYEIDAH
HHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECHH
CRQQPMIDAGCGEYLLHNPEKLCAIVSALAAEGMTVSVKTRAGVVDDRQLARMLWKAGAS
HCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCC
ILHVDLMDTGHTKIRQIRNSCPLIIIANNGVSSPDKMMDYFAHGADLVSVARSASLSVLQ
EEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
TLDRYIRAVAEEIGWYNAPKQLCRGGDLRSLTFCCMPVKQCPLLPSLESLGMSREEYLAL
HHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHEECCHHHCCCCCCHHHHCCCHHHHHHH
KKEMTAETPLSMGSHTCFGSLAYCCKSSTPCMFRDMTLKSIDLPMNEYMALKRTLSEKIV
HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCHHHCCCCHHHHHHHHHHHHHHHH
KKIFENV
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]