Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485840

Identifier: 124485840

GI number: 124485840

Start: 1028865

End: 1029842

Strand: Reverse

Name: 124485840

Synonym: Mlab_1020

Alternate gene names: NA

Gene position: 1029842-1028865 (Counterclockwise)

Preceding gene: 124485842

Following gene: 124485837

Centisome position: 57.06

GC content: 47.96

Gene sequence:

>978_bases
ATGCCGGAAAAAGATCTAGCTGAGACGCTTGCCAGTATGGCAGACCCGAAAAATTTCCCCAAGGATCTGGCAGTGATTCT
GGTTTGGGTCGCGCTTACGGTAGCTATGATCTATGTTCCGGTCGTAAACGAGACGTTTCTTCGGGTATTATTTGCCGTTC
CGGTGATTCTTTTTATTCCGGGGTATGTTTTGATCGGCGCACTGTTTCCGGAAAAGAAGTCGATCGACGGGATCGAACGG
TTTGCTCTCTCAGTCGGTCTTTCGATTGCGGTAGTGCCGCTGATCGGCCTCGTTCTGAATTATACGCCGTTTGGGATTCG
TCTTGATCCGATCGTTACCTCTCTGGTGATCTTTATTCTTGCGATGATGATCATCACGGTATACAGGCGTGCGTCCGTTC
CAGATGAGGAACGGTTTGCCGTGCCTTTCGAGCAGGTAAAACCGACACTCAAAACCGAATTTTTCCCAAAGGACAGTTCA
AAACTGGACAAGGCACTCTCCTGGATCCTTATCGCGGCAATTGTCGTGGCGGCCGTGACAACGGTCTATGTGATCGCATT
TCCAAAAGACGGGGAGAAGTTTACCGAGTTTTATATTTTAGGGGCGGATAAAATGGCAGATGACTACCCCGAGAAGTTTT
TTGCGGGAACAGAACAGTTTGTCTGGATCGGGATCGGGAATCATGAATATCGGGATGTGACCTATACGGTTGAAACCCTA
CTATTGAATGCGGAGTGGGATTCAACAACGAACTCGTCGGTCATTCATGCATCGAAGGTCCTTAATCGCTTTTCGGTAGA
TGTTGCCGATAACTCGACGTATCTGGAGATGTATAATTTTACGATCTACGATACCGAGTACAACCGTCTGGAGTTCCTTT
TGTATAATGAGACGGTACCTGATATCGGGGCGTCGGCAGAGGATAAAATGGCGGCCGCGTACCGTGATCTCCATCTCTGG
ATCAAAGTAATAACATAA

Upstream 100 bases:

>100_bases
ATACCTGACGACGTGATCAAAAACAAGTCTGCCGGTAATCTCACCCCCTAAAGCGTCCCGCAAGTCTCATAATACCTCAC
CACGAATAATACATCCAGAT

Downstream 100 bases:

>100_bases
ACACAGGATTTTTTTGCGGGTCGATAAGCAAGAGGCCCGCAGTAATTTTTGCCGGGTATATCTCGGATTAAAATGTGATG
TGAAAATTTCTCAGTCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MPEKDLAETLASMADPKNFPKDLAVILVWVALTVAMIYVPVVNETFLRVLFAVPVILFIPGYVLIGALFPEKKSIDGIER
FALSVGLSIAVVPLIGLVLNYTPFGIRLDPIVTSLVIFILAMMIITVYRRASVPDEERFAVPFEQVKPTLKTEFFPKDSS
KLDKALSWILIAAIVVAAVTTVYVIAFPKDGEKFTEFYILGADKMADDYPEKFFAGTEQFVWIGIGNHEYRDVTYTVETL
LLNAEWDSTTNSSVIHASKVLNRFSVDVADNSTYLEMYNFTIYDTEYNRLEFLLYNETVPDIGASAEDKMAAAYRDLHLW
IKVIT

Sequences:

>Translated_325_residues
MPEKDLAETLASMADPKNFPKDLAVILVWVALTVAMIYVPVVNETFLRVLFAVPVILFIPGYVLIGALFPEKKSIDGIER
FALSVGLSIAVVPLIGLVLNYTPFGIRLDPIVTSLVIFILAMMIITVYRRASVPDEERFAVPFEQVKPTLKTEFFPKDSS
KLDKALSWILIAAIVVAAVTTVYVIAFPKDGEKFTEFYILGADKMADDYPEKFFAGTEQFVWIGIGNHEYRDVTYTVETL
LLNAEWDSTTNSSVIHASKVLNRFSVDVADNSTYLEMYNFTIYDTEYNRLEFLLYNETVPDIGASAEDKMAAAYRDLHLW
IKVIT
>Mature_324_residues
PEKDLAETLASMADPKNFPKDLAVILVWVALTVAMIYVPVVNETFLRVLFAVPVILFIPGYVLIGALFPEKKSIDGIERF
ALSVGLSIAVVPLIGLVLNYTPFGIRLDPIVTSLVIFILAMMIITVYRRASVPDEERFAVPFEQVKPTLKTEFFPKDSSK
LDKALSWILIAAIVVAAVTTVYVIAFPKDGEKFTEFYILGADKMADDYPEKFFAGTEQFVWIGIGNHEYRDVTYTVETLL
LNAEWDSTTNSSVIHASKVLNRFSVDVADNSTYLEMYNFTIYDTEYNRLEFLLYNETVPDIGASAEDKMAAAYRDLHLWI
KVIT

Specific function: Unknown

COG id: COG4743

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36559; Mature: 36428

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKDLAETLASMADPKNFPKDLAVILVWVALTVAMIYVPVVNETFLRVLFAVPVILFIP
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYVLIGALFPEKKSIDGIERFALSVGLSIAVVPLIGLVLNYTPFGIRLDPIVTSLVIFIL
HHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHH
AMMIITVYRRASVPDEERFAVPFEQVKPTLKTEFFPKDSSKLDKALSWILIAAIVVAAVT
HHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TVYVIAFPKDGEKFTEFYILGADKMADDYPEKFFAGTEQFVWIGIGNHEYRDVTYTVETL
HHEEEEECCCCCCEEEEEEECCHHHHHHCHHHHHCCCCEEEEEEECCCCCCHHEEEEEHE
LLNAEWDSTTNSSVIHASKVLNRFSVDVADNSTYLEMYNFTIYDTEYNRLEFLLYNETVP
EEECCCCCCCCCCHHHHHHHHHHHEEEECCCCEEEEEEEEEEEECCCCEEEEEEECCCCC
DIGASAEDKMAAAYRDLHLWIKVIT
CCCCCCHHHHHHHHHHHHHEEEEEC
>Mature Secondary Structure 
PEKDLAETLASMADPKNFPKDLAVILVWVALTVAMIYVPVVNETFLRVLFAVPVILFIP
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYVLIGALFPEKKSIDGIERFALSVGLSIAVVPLIGLVLNYTPFGIRLDPIVTSLVIFIL
HHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHH
AMMIITVYRRASVPDEERFAVPFEQVKPTLKTEFFPKDSSKLDKALSWILIAAIVVAAVT
HHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TVYVIAFPKDGEKFTEFYILGADKMADDYPEKFFAGTEQFVWIGIGNHEYRDVTYTVETL
HHEEEEECCCCCCEEEEEEECCHHHHHHCHHHHHCCCCEEEEEEECCCCCCHHEEEEEHE
LLNAEWDSTTNSSVIHASKVLNRFSVDVADNSTYLEMYNFTIYDTEYNRLEFLLYNETVP
EEECCCCCCCCCCHHHHHHHHHHHEEEECCCCEEEEEEEEEEEECCCCEEEEEEECCCCC
DIGASAEDKMAAAYRDLHLWIKVIT
CCCCCCHHHHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA