| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485734
Identifier: 124485734
GI number: 124485734
Start: 907543
End: 908451
Strand: Reverse
Name: 124485734
Synonym: Mlab_0912
Alternate gene names: NA
Gene position: 908451-907543 (Counterclockwise)
Preceding gene: 124485735
Following gene: 124485733
Centisome position: 50.33
GC content: 49.17
Gene sequence:
>909_bases ATGGAACACGCAGACATTATATCTGGAGCTTATACCTATACCAAAGAGGCATTTTTCGCCCTGAAACAGCTTCCACGCTG GATCGTGCTTTTTCTCTATGTCGCATTACCCATCCTTGTGTGTCTTGCAATCTCCTCGCTTATCCTCCAGATGGCGGTTC TCCCGGTACTTGTGAACGTGTTTGTCAACGACAACTACGGATTCACGGCAGCGAGCCTGTCGGGACTCCTGCAGTATTTC GCCGTTATTCTGAGCCTGTGTTGCGTCTTCTTCGTGCCGCTGATCCAGGGATACTGTTATCGGATCGCAAAAAGCGATAG TTCCGAGATGCCCGACCATACGAATCTCTGGGGACTGTTTTTCAGCGGCTGGCGGATCAACTTCGTCATTCTCTATTACG CGATTCCGATCATCGTCATCTCGCTCATTTATGCGATGATCTTTTACTATCTGTTTCCCGAGGCAGGATTTTATACGACG ATCGATGTTCTGGCGCTGGAAAGTCTGTTTACCGTTCTGATCACTCTCTCATATGTGGCCGTTGAGTTCATCACGATCAT TCTGGTCTCGCTGTTTGCGTTTGTCGGACTCGTCCATCTGACACGCTCCGGCTCGCTTGCAGAAGCGACCCATATACGCG GGATCGCAGATATCATTAAAAAGATCGGATGGTACGACTACATTCTTTCGCTTGTGATCATGAGCATCCTCTTCCTTTTA GTCACGTTCATCCTGATCCTGCTTGCCCAGATATTTGCCTACAACGGCGTCGCGATCGTGATTCTGATCGGCGTGTATCT CTTTGTAATGATCCCGATCATGGTCTTTTTCATCAGATACCTCTCCGAGGTCTACGACACGGCATTCCGGGTCCCCGAAG AGGACGACGTAGACTTCGATGATTTCTGA
Upstream 100 bases:
>100_bases CCGGTCCGAGAAATTCTTGTGGCATGCCGTATAATCACGGAGCCATAACCAACAATTAATACCGGAGTCCAACAATAGTA ATTACGTAAGGAAGGCACCC
Downstream 100 bases:
>100_bases AAATGCCTGATCAGTTCTCGCTTCAATCCACCTATTCGCCGAAAGGATCCCAGCCGGAAGCGATCGAAGAACTGACCGAA GGCCTTCTCGATGGTGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MEHADIISGAYTYTKEAFFALKQLPRWIVLFLYVALPILVCLAISSLILQMAVLPVLVNVFVNDNYGFTAASLSGLLQYF AVILSLCCVFFVPLIQGYCYRIAKSDSSEMPDHTNLWGLFFSGWRINFVILYYAIPIIVISLIYAMIFYYLFPEAGFYTT IDVLALESLFTVLITLSYVAVEFITIILVSLFAFVGLVHLTRSGSLAEATHIRGIADIIKKIGWYDYILSLVIMSILFLL VTFILILLAQIFAYNGVAIVILIGVYLFVMIPIMVFFIRYLSEVYDTAFRVPEEDDVDFDDF
Sequences:
>Translated_302_residues MEHADIISGAYTYTKEAFFALKQLPRWIVLFLYVALPILVCLAISSLILQMAVLPVLVNVFVNDNYGFTAASLSGLLQYF AVILSLCCVFFVPLIQGYCYRIAKSDSSEMPDHTNLWGLFFSGWRINFVILYYAIPIIVISLIYAMIFYYLFPEAGFYTT IDVLALESLFTVLITLSYVAVEFITIILVSLFAFVGLVHLTRSGSLAEATHIRGIADIIKKIGWYDYILSLVIMSILFLL VTFILILLAQIFAYNGVAIVILIGVYLFVMIPIMVFFIRYLSEVYDTAFRVPEEDDVDFDDF >Mature_302_residues MEHADIISGAYTYTKEAFFALKQLPRWIVLFLYVALPILVCLAISSLILQMAVLPVLVNVFVNDNYGFTAASLSGLLQYF AVILSLCCVFFVPLIQGYCYRIAKSDSSEMPDHTNLWGLFFSGWRINFVILYYAIPIIVISLIYAMIFYYLFPEAGFYTT IDVLALESLFTVLITLSYVAVEFITIILVSLFAFVGLVHLTRSGSLAEATHIRGIADIIKKIGWYDYILSLVIMSILFLL VTFILILLAQIFAYNGVAIVILIGVYLFVMIPIMVFFIRYLSEVYDTAFRVPEEDDVDFDDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34270; Mature: 34270
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHADIISGAYTYTKEAFFALKQLPRWIVLFLYVALPILVCLAISSLILQMAVLPVLVNV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVNDNYGFTAASLSGLLQYFAVILSLCCVFFVPLIQGYCYRIAKSDSSEMPDHTNLWGLF HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH FSGWRINFVILYYAIPIIVISLIYAMIFYYLFPEAGFYTTIDVLALESLFTVLITLSYVA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VEFITIILVSLFAFVGLVHLTRSGSLAEATHIRGIADIIKKIGWYDYILSLVIMSILFLL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTFILILLAQIFAYNGVAIVILIGVYLFVMIPIMVFFIRYLSEVYDTAFRVPEEDDVDFD HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DF CC >Mature Secondary Structure MEHADIISGAYTYTKEAFFALKQLPRWIVLFLYVALPILVCLAISSLILQMAVLPVLVNV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVNDNYGFTAASLSGLLQYFAVILSLCCVFFVPLIQGYCYRIAKSDSSEMPDHTNLWGLF HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH FSGWRINFVILYYAIPIIVISLIYAMIFYYLFPEAGFYTTIDVLALESLFTVLITLSYVA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH VEFITIILVSLFAFVGLVHLTRSGSLAEATHIRGIADIIKKIGWYDYILSLVIMSILFLL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTFILILLAQIFAYNGVAIVILIGVYLFVMIPIMVFFIRYLSEVYDTAFRVPEEDDVDFD HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA