| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485699
Identifier: 124485699
GI number: 124485699
Start: 865649
End: 866911
Strand: Reverse
Name: 124485699
Synonym: Mlab_0877
Alternate gene names: NA
Gene position: 866911-865649 (Counterclockwise)
Preceding gene: 124485700
Following gene: 124485698
Centisome position: 48.03
GC content: 46.16
Gene sequence:
>1263_bases ATGCATCCGACCCCGCTGACCAGTACTCTATTACTGTTTACTCTTTTTTGTTTTGGGTATGCCTGGCTGATGAATTCATC GGAAGCAGTAGGTGCGGGTCTTGGAATTCTGGTCGTTCTGGTAATTCAGGCAGGCATTTTCCACGCAAAACTGCGTACCC TTGTTCTCTCTCTTAATGTAACCCGTGATGTCGACAAGCAGATTCTTCATCAGAATTCGATTGTTAACATAACATCGTCG ATTACTGTTGTAATTAAACAATTGACGGCTTCATTCGAAGACGTTCCCCCGACAGGTTCTGTTCTGATTTCAGGCTCGAC AAAGTTCATCGAAGGAAGAGCGACATATGCAGTGAGAATACCGGTCATCGGTGATTCGTATTTTAGAGGGATACAGATTA CATGCAGCGACATGTTTTTCGCCCGTACACTTCTGTTTGCCCGAAACGCCGGGCTTCCTAAGTTCACTATGTACCCAACC GGGATCTCGCAAACATACACGATCATTGGGCATGGGGCAGGATGGGGAGCTAAAGAATATGACAGACACGCACTTCTCCA GGGTTTTGATATTAGATCTCTGCGCCCCTACTCGGATGGGGATAACATCAGAGATATCGACTGGAAGCTCTCAAGTAAGC ACAGAGATCTCTATGTTCGCCTGAAATCGGATGCATCCGGCGGTCTGCCTGCATTAATTGCAGATATTCCCCCGCTCGGT GCCTCAAAAGAAACATGTATTCATTTTGCCGAGACGGTCATCGGTGCTTTGGAGGGAATTAAAATCGGAGATGATTTTCC GGTTATTTTCTTCTCCGGCGCCATGTATTTGGGAATAACCCGCTCAGGTCTCACCCATGAAATCAATGCCATGCTCAAAC GTGCCGGCAGTATCCGTCCTACGGACTATGTATTTCGACTCAGTCATCCGTATGCATTGATGGAAACAGATAAACCTGGT AAGATCATGACTGATTTTGAACAACGCATTTCCGATTTGGAGCAGCAGTATGCCGGACGTTATCCTACTGATTTTGAAAA TGTCGTGAAAAACATCGTGATGGATATGGAAAATGAGACACACGTCACTTTTGTCACCACAGCGCACGGAGATCTGAGTC ATCTGACATATTTTATTTCGGAAACAAAGATGAAAAATCGTCATGTAACGGTGTTTGTTGTAGGGGTTGCCGGAACTTCT CGCGAAGAAGAAGTGCGTAATGCCCTAACCCGTGCCGGGGCAAATGATCTGGAGATGGTCTGA
Upstream 100 bases:
>100_bases CAATCACCGTCTGATCCTCAAACGCGAAGCGGTTCTTGGCGGCATCACAATTCAGCGGGTTATCTCAGATATTCTGGAAA GTGTTCCGGTGAGATAATCC
Downstream 100 bases:
>100_bases ATGAATAAAATAGTATTCTCGATACTAATGGCGATCGTTGCAGTTATTGGTGCTGCAAATGATCAGAGGATCATCGCCGT GATCCTGGCAGCGGCGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MHPTPLTSTLLLFTLFCFGYAWLMNSSEAVGAGLGILVVLVIQAGIFHAKLRTLVLSLNVTRDVDKQILHQNSIVNITSS ITVVIKQLTASFEDVPPTGSVLISGSTKFIEGRATYAVRIPVIGDSYFRGIQITCSDMFFARTLLFARNAGLPKFTMYPT GISQTYTIIGHGAGWGAKEYDRHALLQGFDIRSLRPYSDGDNIRDIDWKLSSKHRDLYVRLKSDASGGLPALIADIPPLG ASKETCIHFAETVIGALEGIKIGDDFPVIFFSGAMYLGITRSGLTHEINAMLKRAGSIRPTDYVFRLSHPYALMETDKPG KIMTDFEQRISDLEQQYAGRYPTDFENVVKNIVMDMENETHVTFVTTAHGDLSHLTYFISETKMKNRHVTVFVVGVAGTS REEEVRNALTRAGANDLEMV
Sequences:
>Translated_420_residues MHPTPLTSTLLLFTLFCFGYAWLMNSSEAVGAGLGILVVLVIQAGIFHAKLRTLVLSLNVTRDVDKQILHQNSIVNITSS ITVVIKQLTASFEDVPPTGSVLISGSTKFIEGRATYAVRIPVIGDSYFRGIQITCSDMFFARTLLFARNAGLPKFTMYPT GISQTYTIIGHGAGWGAKEYDRHALLQGFDIRSLRPYSDGDNIRDIDWKLSSKHRDLYVRLKSDASGGLPALIADIPPLG ASKETCIHFAETVIGALEGIKIGDDFPVIFFSGAMYLGITRSGLTHEINAMLKRAGSIRPTDYVFRLSHPYALMETDKPG KIMTDFEQRISDLEQQYAGRYPTDFENVVKNIVMDMENETHVTFVTTAHGDLSHLTYFISETKMKNRHVTVFVVGVAGTS REEEVRNALTRAGANDLEMV >Mature_420_residues MHPTPLTSTLLLFTLFCFGYAWLMNSSEAVGAGLGILVVLVIQAGIFHAKLRTLVLSLNVTRDVDKQILHQNSIVNITSS ITVVIKQLTASFEDVPPTGSVLISGSTKFIEGRATYAVRIPVIGDSYFRGIQITCSDMFFARTLLFARNAGLPKFTMYPT GISQTYTIIGHGAGWGAKEYDRHALLQGFDIRSLRPYSDGDNIRDIDWKLSSKHRDLYVRLKSDASGGLPALIADIPPLG ASKETCIHFAETVIGALEGIKIGDDFPVIFFSGAMYLGITRSGLTHEINAMLKRAGSIRPTDYVFRLSHPYALMETDKPG KIMTDFEQRISDLEQQYAGRYPTDFENVVKNIVMDMENETHVTFVTTAHGDLSHLTYFISETKMKNRHVTVFVVGVAGTS REEEVRNALTRAGANDLEMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46442; Mature: 46442
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPTPLTSTLLLFTLFCFGYAWLMNSSEAVGAGLGILVVLVIQAGIFHAKLRTLVLSLNV CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC TRDVDKQILHQNSIVNITSSITVVIKQLTASFEDVPPTGSVLISGSTKFIEGRATYAVRI CHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCEEEEEEE PVIGDSYFRGIQITCSDMFFARTLLFARNAGLPKFTMYPTGISQTYTIIGHGAGWGAKEY EEECCCHHCCEEEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCCCHHH DRHALLQGFDIRSLRPYSDGDNIRDIDWKLSSKHRDLYVRLKSDASGGLPALIADIPPLG HHHHHHCCCCCCCCCCCCCCCCEEEECEEECCCCCEEEEEEECCCCCCCCCCEECCCCCC ASKETCIHFAETVIGALEGIKIGDDFPVIFFSGAMYLGITRSGLTHEINAMLKRAGSIRP CCHHHHHHHHHHHHHHHCCCEECCCCCEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCC TDYVFRLSHPYALMETDKPGKIMTDFEQRISDLEQQYAGRYPTDFENVVKNIVMDMENET CCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC HVTFVTTAHGDLSHLTYFISETKMKNRHVTVFVVGVAGTSREEEVRNALTRAGANDLEMV EEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHPTPLTSTLLLFTLFCFGYAWLMNSSEAVGAGLGILVVLVIQAGIFHAKLRTLVLSLNV CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC TRDVDKQILHQNSIVNITSSITVVIKQLTASFEDVPPTGSVLISGSTKFIEGRATYAVRI CHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCEEEEEEE PVIGDSYFRGIQITCSDMFFARTLLFARNAGLPKFTMYPTGISQTYTIIGHGAGWGAKEY EEECCCHHCCEEEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCCCHHH DRHALLQGFDIRSLRPYSDGDNIRDIDWKLSSKHRDLYVRLKSDASGGLPALIADIPPLG HHHHHHCCCCCCCCCCCCCCCCEEEECEEECCCCCEEEEEEECCCCCCCCCCEECCCCCC ASKETCIHFAETVIGALEGIKIGDDFPVIFFSGAMYLGITRSGLTHEINAMLKRAGSIRP CCHHHHHHHHHHHHHHHCCCEECCCCCEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCC TDYVFRLSHPYALMETDKPGKIMTDFEQRISDLEQQYAGRYPTDFENVVKNIVMDMENET CCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC HVTFVTTAHGDLSHLTYFISETKMKNRHVTVFVVGVAGTSREEEVRNALTRAGANDLEMV EEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA