| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485698
Identifier: 124485698
GI number: 124485698
Start: 865214
End: 865648
Strand: Reverse
Name: 124485698
Synonym: Mlab_0876
Alternate gene names: NA
Gene position: 865648-865214 (Counterclockwise)
Preceding gene: 124485699
Following gene: 124485697
Centisome position: 47.96
GC content: 46.67
Gene sequence:
>435_bases ATGAATAAAATAGTATTCTCGATACTAATGGCGATCGTTGCAGTTATTGGTGCTGCAAATGATCAGAGGATCATCGCCGT GATCCTGGCAGCGGCGTTCCTCATCTGCACGCTGATCAAAATATCTCCCGAACGAAAGATCCTGTTTATGACGGCGACGG GCTTCCCGCTCGTGCTCACATCCGGGTATGTACTGGTGACAGGTCTTCTGATCTTTTTCCTGATTCTGGCAATTACTGCA TGCACTGAAACACCGATGAGGCTGAACATAATCCTCATAAGTCTTCTTGCGGGTGCTGCCGGATGCATATTCGCTCTGCA GATATCGGTAGTTCTCCCGGTGCTCGCGTCAGGAATCTTCGTTATTGTTGTCATCTATATCCTGTTTATCAGAGAATACC GTCTGAAAAAAGAAGTCAAGGGAGCTAACAAATGA
Upstream 100 bases:
>100_bases TGTAACGGTGTTTGTTGTAGGGGTTGCCGGAACTTCTCGCGAAGAAGAAGTGCGTAATGCCCTAACCCGTGCCGGGGCAA ATGATCTGGAGATGGTCTGA
Downstream 100 bases:
>100_bases AACTCAAATCAACACTTATAACCTCGGCATACTTCGCACCGATTGTATTGTTTCTTGCTGCAATACTGACCTTTACCGCA TATATCTTCACGAACCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MNKIVFSILMAIVAVIGAANDQRIIAVILAAAFLICTLIKISPERKILFMTATGFPLVLTSGYVLVTGLLIFFLILAITA CTETPMRLNIILISLLAGAAGCIFALQISVVLPVLASGIFVIVVIYILFIREYRLKKEVKGANK
Sequences:
>Translated_144_residues MNKIVFSILMAIVAVIGAANDQRIIAVILAAAFLICTLIKISPERKILFMTATGFPLVLTSGYVLVTGLLIFFLILAITA CTETPMRLNIILISLLAGAAGCIFALQISVVLPVLASGIFVIVVIYILFIREYRLKKEVKGANK >Mature_144_residues MNKIVFSILMAIVAVIGAANDQRIIAVILAAAFLICTLIKISPERKILFMTATGFPLVLTSGYVLVTGLLIFFLILAITA CTETPMRLNIILISLLAGAAGCIFALQISVVLPVLASGIFVIVVIYILFIREYRLKKEVKGANK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15554; Mature: 15554
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIVFSILMAIVAVIGAANDQRIIAVILAAAFLICTLIKISPERKILFMTATGFPLVLT CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHH SGYVLVTGLLIFFLILAITACTETPMRLNIILISLLAGAAGCIFALQISVVLPVLASGIF CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIVVIYILFIREYRLKKEVKGANK HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNKIVFSILMAIVAVIGAANDQRIIAVILAAAFLICTLIKISPERKILFMTATGFPLVLT CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHH SGYVLVTGLLIFFLILAITACTETPMRLNIILISLLAGAAGCIFALQISVVLPVLASGIF CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIVVIYILFIREYRLKKEVKGANK HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA