| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485692
Identifier: 124485692
GI number: 124485692
Start: 859962
End: 860711
Strand: Reverse
Name: 124485692
Synonym: Mlab_0870
Alternate gene names: NA
Gene position: 860711-859962 (Counterclockwise)
Preceding gene: 124485693
Following gene: 124485688
Centisome position: 47.69
GC content: 51.6
Gene sequence:
>750_bases ATGAAAAAGTTCTCGTGGGAGGCACGCCTCGCCTGTATGCTGATCGCGATCTCGATCTGTGTGTATGCGATTAAATTCCT GTTCTTTGGTGACAACGGGGAAAGCAACACCATGTCGTACATCTTCAACAGCCTGGGTTTTCTCCCGATCAACATTCTGA TCGTAACGCTGATCATCAACCGTCTGCTGACCATGCGGGCGAAACGTGAGCAGCGGGAAAAAACCCGGATGGTCATCGGC CTCTTTTTCACTGAGATGGGCGATACCCTGCTTCGCAAGATGGTTCAGTGGGACACAGCGCCAGAAACGCTTCGCGAGAC GATGCTGGTCACAAATACCTGGACCAAAGAGCAGTACAAAGCGGCAAAGGAACAAGCCGCAAAATTATGCACCCGCACGA TCCCGAGCGCCGACGATCTGACCGAGGTCAGAGATCTCTTTATGAAAAATCACGACTTTCTGCTGCGGCTGATCGAAAAC CCGGTGCTTCTCGAGCATAACACCGTCTCGAAACTCATGCAGGATCTTTTCCATCTGGGAGAAGAACTTGCCAGCAGAAA GGATATCCACTCTCTGCCGGCGTCCGATCTCGCTCACCTTTCAGGCGACGTGAATCGTGTTTACTGTCAGCTCACGACCG CATGGCTGGAACACATGGAGTATTTGAGCAGGAACTACCCGTATCTGCTCTCTCTTTCTTTACGTAAAAGTCCGTTCCTG CTGGAAGACCGGGTCGTCGTTACCGAATAA
Upstream 100 bases:
>100_bases CGAAGGTGCGGGAAAACAGGGTATGCCACCCGGTCATCGAAGTGGAGACGCTGGAAGGAGCGCTTGAAAGCATTTCCGCT CTGGAAGAGAGGGGATACGT
Downstream 100 bases:
>100_bases AAAAACTTATTTTTTAAAGAACCCGCGGCGTGAGGGTTTTGAAGCTGCGGCTTCCTTTTGGAGGTTGAGCAGATGGTGCA TCACCCGGACCTCTTTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKKFSWEARLACMLIAISICVYAIKFLFFGDNGESNTMSYIFNSLGFLPINILIVTLIINRLLTMRAKREQREKTRMVIG LFFTEMGDTLLRKMVQWDTAPETLRETMLVTNTWTKEQYKAAKEQAAKLCTRTIPSADDLTEVRDLFMKNHDFLLRLIEN PVLLEHNTVSKLMQDLFHLGEELASRKDIHSLPASDLAHLSGDVNRVYCQLTTAWLEHMEYLSRNYPYLLSLSLRKSPFL LEDRVVVTE
Sequences:
>Translated_249_residues MKKFSWEARLACMLIAISICVYAIKFLFFGDNGESNTMSYIFNSLGFLPINILIVTLIINRLLTMRAKREQREKTRMVIG LFFTEMGDTLLRKMVQWDTAPETLRETMLVTNTWTKEQYKAAKEQAAKLCTRTIPSADDLTEVRDLFMKNHDFLLRLIEN PVLLEHNTVSKLMQDLFHLGEELASRKDIHSLPASDLAHLSGDVNRVYCQLTTAWLEHMEYLSRNYPYLLSLSLRKSPFL LEDRVVVTE >Mature_249_residues MKKFSWEARLACMLIAISICVYAIKFLFFGDNGESNTMSYIFNSLGFLPINILIVTLIINRLLTMRAKREQREKTRMVIG LFFTEMGDTLLRKMVQWDTAPETLRETMLVTNTWTKEQYKAAKEQAAKLCTRTIPSADDLTEVRDLFMKNHDFLLRLIEN PVLLEHNTVSKLMQDLFHLGEELASRKDIHSLPASDLAHLSGDVNRVYCQLTTAWLEHMEYLSRNYPYLLSLSLRKSPFL LEDRVVVTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28918; Mature: 28918
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS00761 SPASE_I_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFSWEARLACMLIAISICVYAIKFLFFGDNGESNTMSYIFNSLGFLPINILIVTLIIN CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHH RLLTMRAKREQREKTRMVIGLFFTEMGDTLLRKMVQWDTAPETLRETMLVTNTWTKEQYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHH AAKEQAAKLCTRTIPSADDLTEVRDLFMKNHDFLLRLIENPVLLEHNTVSKLMQDLFHLG HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHH EELASRKDIHSLPASDLAHLSGDVNRVYCQLTTAWLEHMEYLSRNYPYLLSLSLRKSPFL HHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCE LEDRVVVTE EECCEEECC >Mature Secondary Structure MKKFSWEARLACMLIAISICVYAIKFLFFGDNGESNTMSYIFNSLGFLPINILIVTLIIN CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHH RLLTMRAKREQREKTRMVIGLFFTEMGDTLLRKMVQWDTAPETLRETMLVTNTWTKEQYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHH AAKEQAAKLCTRTIPSADDLTEVRDLFMKNHDFLLRLIENPVLLEHNTVSKLMQDLFHLG HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHH EELASRKDIHSLPASDLAHLSGDVNRVYCQLTTAWLEHMEYLSRNYPYLLSLSLRKSPFL HHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCE LEDRVVVTE EECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]