Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is yjiL [C]

Identifier: 124485376

GI number: 124485376

Start: 524791

End: 526053

Strand: Reverse

Name: yjiL [C]

Synonym: Mlab_0551

Alternate gene names: 124485376

Gene position: 526053-524791 (Counterclockwise)

Preceding gene: 124485377

Following gene: 124485375

Centisome position: 29.14

GC content: 55.66

Gene sequence:

>1263_bases
ATGAGCGCAAAAGAACAACCCGTACGGATCGCCCAGATCACCTGCGGCGCAGAATACAGTGGAATCCAAAACGAAATCAC
TTCGGCGGCGGAGACCGTCGGCGCAAAGATGTTTTACCCGGACGTTGCCTTAAAGGACGTCAAACGGGCCTACAAGGACT
TCGGCCTTCCGGTGAAAAGCCCGGATCTGAAACTCGCCATCGCCCGTGCCCAGGCGATCGTTGAAGGAAGAATCGAGGCG
GACGGAATCTTCATCGCAAGCTGCTTCAGGTGTGCCGAGGCGGCAATCGTCCGTAACGAACTCCGCAGATACATCGTGGA
AAACTCGAAGATACCGGTCGTCTCCTACTCGTTCAACGAGCGGACCGGCGCATCCACTCTTCTGACAAGGCTCGAAGCCT
TATCCACGATCGCAAAACGCCGGGCACTGATGGCCCGCGAGGTCCAGGTCGGGACTACGATGGGTGTCGACTCCGGATCA
TCGACCACCAAATGCATAATCATGCAGGACAACGAGATCATCGGAACCGGCTGGAGACCGACCACCGATGTTCTGAAAAG
TGCTGACGACGTCGTGTCCCTGGCATTAAAGGAGTCTGGACTCAAACTCTCCGACATTGAGGCAATTGGAACAACCGGAT
ACGGAAGGTTCCTGGTCGGCAAACACATCAAAGCCGATCTTATCCAGGAAGAACTCACCGTCAACTCCAAAGGAGCGGTA
TATCTTGCAAACGCCCAGAAAGGATTTGCCACCGTGATTGATATCGGCGGTATGGATAACAAGGCCATCAGCGTAAAAGA
CGGAATCCCCGGTTCCTTTACGATGGGGGGTATCTGCGCCGGAGCATCGGGACGGTTCCTCGAAATGACGTCCAAACGCC
TTGGAATCGACATCACCGAACTCGGCGCACTCTCGATGGAAAGCGAAGGCGGCGAGAATGTCCCGATGAACAGTTATTGT
ATCGTCTTTGGAACGCAGTCTCTCGTCAATGCTTTGGCGGCTGGATACAAACCCGCAGATGTTGCCGCGGCGGCGTGTCA
CAGTGTAGCTCAGCAGGTGTACGAACAGCAGCTCCAGGAAGTCGATATCAAAGAGCCGGTCATCATGGTCGGGGGATCAT
CGCTTATTCAGGGACTTGTCCGGGCAATGGGCCGGATGCTCAGAACCGAGGTCGTCGTGCCCCATCACGCCCAGTACATC
GGGGCGGTCGGCGGGGCACTGCTTTCCTCGGGATTCGTCGATAAAAAGGTGAAGGAGGCGTAA

Upstream 100 bases:

>100_bases
AGATGCCCAAACTGGAACTGAGATATCCGGCATCCAAAGAAGAGGGCGTGACGTTCGTTGCAAAAATCAAACAGTTCTTA
AACGAGCTGGAGGTCAAAAA

Downstream 100 bases:

>100_bases
ATGGCTGGTTTGGACTACTTCGAGGTGGAATGCACCGAAGACGGGTCGGACAACTATATCAAAATCGCCACAACCGTACT
GCAGGATCACAACCTCCTCA

Product: NADPH-dependent F420 reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MSAKEQPVRIAQITCGAEYSGIQNEITSAAETVGAKMFYPDVALKDVKRAYKDFGLPVKSPDLKLAIARAQAIVEGRIEA
DGIFIASCFRCAEAAIVRNELRRYIVENSKIPVVSYSFNERTGASTLLTRLEALSTIAKRRALMAREVQVGTTMGVDSGS
STTKCIIMQDNEIIGTGWRPTTDVLKSADDVVSLALKESGLKLSDIEAIGTTGYGRFLVGKHIKADLIQEELTVNSKGAV
YLANAQKGFATVIDIGGMDNKAISVKDGIPGSFTMGGICAGASGRFLEMTSKRLGIDITELGALSMESEGGENVPMNSYC
IVFGTQSLVNALAAGYKPADVAAAACHSVAQQVYEQQLQEVDIKEPVIMVGGSSLIQGLVRAMGRMLRTEVVVPHHAQYI
GAVGGALLSSGFVDKKVKEA

Sequences:

>Translated_420_residues
MSAKEQPVRIAQITCGAEYSGIQNEITSAAETVGAKMFYPDVALKDVKRAYKDFGLPVKSPDLKLAIARAQAIVEGRIEA
DGIFIASCFRCAEAAIVRNELRRYIVENSKIPVVSYSFNERTGASTLLTRLEALSTIAKRRALMAREVQVGTTMGVDSGS
STTKCIIMQDNEIIGTGWRPTTDVLKSADDVVSLALKESGLKLSDIEAIGTTGYGRFLVGKHIKADLIQEELTVNSKGAV
YLANAQKGFATVIDIGGMDNKAISVKDGIPGSFTMGGICAGASGRFLEMTSKRLGIDITELGALSMESEGGENVPMNSYC
IVFGTQSLVNALAAGYKPADVAAAACHSVAQQVYEQQLQEVDIKEPVIMVGGSSLIQGLVRAMGRMLRTEVVVPHHAQYI
GAVGGALLSSGFVDKKVKEA
>Mature_419_residues
SAKEQPVRIAQITCGAEYSGIQNEITSAAETVGAKMFYPDVALKDVKRAYKDFGLPVKSPDLKLAIARAQAIVEGRIEAD
GIFIASCFRCAEAAIVRNELRRYIVENSKIPVVSYSFNERTGASTLLTRLEALSTIAKRRALMAREVQVGTTMGVDSGSS
TTKCIIMQDNEIIGTGWRPTTDVLKSADDVVSLALKESGLKLSDIEAIGTTGYGRFLVGKHIKADLIQEELTVNSKGAVY
LANAQKGFATVIDIGGMDNKAISVKDGIPGSFTMGGICAGASGRFLEMTSKRLGIDITELGALSMESEGGENVPMNSYCI
VFGTQSLVNALAAGYKPADVAAAACHSVAQQVYEQQLQEVDIKEPVIMVGGSSLIQGLVRAMGRMLRTEVVVPHHAQYIG
AVGGALLSSGFVDKKVKEA

Specific function: Unknown

COG id: COG1924

COG function: function code I; Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082426, Length=265, Percent_Identity=31.6981132075472, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002731
- InterPro:   IPR008275
- InterPro:   IPR017676 [H]

Pfam domain/function: PF01869 BcrAD_BadFG [H]

EC number: NA

Molecular weight: Translated: 44655; Mature: 44524

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKEQPVRIAQITCGAEYSGIQNEITSAAETVGAKMFYPDVALKDVKRAYKDFGLPVKS
CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCCC
PDLKLAIARAQAIVEGRIEADGIFIASCFRCAEAAIVRNELRRYIVENSKIPVVSYSFNE
CCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
RTGASTLLTRLEALSTIAKRRALMAREVQVGTTMGVDSGSSTTKCIIMQDNEIIGTGWRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCEEEECCCCC
TTDVLKSADDVVSLALKESGLKLSDIEAIGTTGYGRFLVGKHIKADLIQEELTVNSKGAV
HHHHHHCHHHHHHHHHHHCCCEEEHHHECCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCE
YLANAQKGFATVIDIGGMDNKAISVKDGIPGSFTMGGICAGASGRFLEMTSKRLGIDITE
EEECCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCEEECCCCCCCEEHHHHHCCCHHH
LGALSMESEGGENVPMNSYCIVFGTQSLVNALAAGYKPADVAAAACHSVAQQVYEQQLQE
HCCEEECCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VDIKEPVIMVGGSSLIQGLVRAMGRMLRTEVVVPHHAQYIGAVGGALLSSGFVDKKVKEA
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure 
SAKEQPVRIAQITCGAEYSGIQNEITSAAETVGAKMFYPDVALKDVKRAYKDFGLPVKS
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCCC
PDLKLAIARAQAIVEGRIEADGIFIASCFRCAEAAIVRNELRRYIVENSKIPVVSYSFNE
CCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
RTGASTLLTRLEALSTIAKRRALMAREVQVGTTMGVDSGSSTTKCIIMQDNEIIGTGWRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCEEEECCCCC
TTDVLKSADDVVSLALKESGLKLSDIEAIGTTGYGRFLVGKHIKADLIQEELTVNSKGAV
HHHHHHCHHHHHHHHHHHCCCEEEHHHECCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCE
YLANAQKGFATVIDIGGMDNKAISVKDGIPGSFTMGGICAGASGRFLEMTSKRLGIDITE
EEECCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCEEECCCCCCCEEHHHHHCCCHHH
LGALSMESEGGENVPMNSYCIVFGTQSLVNALAAGYKPADVAAAACHSVAQQVYEQQLQE
HCCEEECCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
VDIKEPVIMVGGSSLIQGLVRAMGRMLRTEVVVPHHAQYIGAVGGALLSSGFVDKKVKEA
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]