Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485375

Identifier: 124485375

GI number: 124485375

Start: 524209

End: 524790

Strand: Reverse

Name: 124485375

Synonym: Mlab_0550

Alternate gene names: NA

Gene position: 524790-524209 (Counterclockwise)

Preceding gene: 124485376

Following gene: 124485374

Centisome position: 29.07

GC content: 52.75

Gene sequence:

>582_bases
ATGGCTGGTTTGGACTACTTCGAGGTGGAATGCACCGAAGACGGGTCGGACAACTATATCAAAATCGCCACAACCGTACT
GCAGGATCACAACCTCCTCAGTATCGTGGAAGGACTGCACATCTACATCGATCCGAAGTATCCCCTGTTCGTGGCAACGG
GATTCATCCGCCCGCCGCGTTCCGTGATAAAGGTCTCGGATGTGGGCAATGTACTGCTTCAGGACGATCAGGCAACGATC
GCGGTTGGAGATGAGACCTATCTTGCCGCGATGCTGAAGATGCTTTGGGCCAAACTCGGACACGACAATGTCGATCAACC
CGACCGGTTCACGGTGATCATCAAAAATACGGAGATCCCAAAGGATCTGAGAGACTGGGTGGTTATCGACCCGTCCCAGT
CGCTCTTTAAGGATCTGATCTACGCGATCCAGGTGATCGCTCCCGAAGGCTTCAAAGTCCGGCGCGAAAACTACGGAAAG
AACCGGTTTTCCTATGCGGCAAGCGAAAACACCCTTCCGGCGAAAGATATCGAGAAGATCATCGCCGAAAGATTCGAGCA
GATGGAGGAGGCACTGAAATGA

Upstream 100 bases:

>100_bases
AACCGAGGTCGTCGTGCCCCATCACGCCCAGTACATCGGGGCGGTCGGCGGGGCACTGCTTTCCTCGGGATTCGTCGATA
AAAAGGTGAAGGAGGCGTAA

Downstream 100 bases:

>100_bases
TCCTTGTCCCGATCACCTATAAAGGCGGAGTGTACCGTCTCGACGAGGTCGTCGATTATATCGAGGATCTTGGCGGCTAC
ATCGTCCAGAGACATAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAGLDYFEVECTEDGSDNYIKIATTVLQDHNLLSIVEGLHIYIDPKYPLFVATGFIRPPRSVIKVSDVGNVLLQDDQATI
AVGDETYLAAMLKMLWAKLGHDNVDQPDRFTVIIKNTEIPKDLRDWVVIDPSQSLFKDLIYAIQVIAPEGFKVRRENYGK
NRFSYAASENTLPAKDIEKIIAERFEQMEEALK

Sequences:

>Translated_193_residues
MAGLDYFEVECTEDGSDNYIKIATTVLQDHNLLSIVEGLHIYIDPKYPLFVATGFIRPPRSVIKVSDVGNVLLQDDQATI
AVGDETYLAAMLKMLWAKLGHDNVDQPDRFTVIIKNTEIPKDLRDWVVIDPSQSLFKDLIYAIQVIAPEGFKVRRENYGK
NRFSYAASENTLPAKDIEKIIAERFEQMEEALK
>Mature_192_residues
AGLDYFEVECTEDGSDNYIKIATTVLQDHNLLSIVEGLHIYIDPKYPLFVATGFIRPPRSVIKVSDVGNVLLQDDQATIA
VGDETYLAAMLKMLWAKLGHDNVDQPDRFTVIIKNTEIPKDLRDWVVIDPSQSLFKDLIYAIQVIAPEGFKVRRENYGKN
RFSYAASENTLPAKDIEKIIAERFEQMEEALK

Specific function: Unknown

COG id: COG4051

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21910; Mature: 21779

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLDYFEVECTEDGSDNYIKIATTVLQDHNLLSIVEGLHIYIDPKYPLFVATGFIRPPR
CCCCCEEEEEECCCCCCCEEEEEEEHHCCCCHHHHHCCEEEEECCCCCEEEEECCCCCCH
SVIKVSDVGNVLLQDDQATIAVGDETYLAAMLKMLWAKLGHDNVDQPDRFTVIIKNTEIP
HHEEECCCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC
KDLRDWVVIDPSQSLFKDLIYAIQVIAPEGFKVRRENYGKNRFSYAASENTLPAKDIEKI
CCCCCCEEECCCHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCEEECCCCCCCCHHHHHHH
IAERFEQMEEALK
HHHHHHHHHHHCC
>Mature Secondary Structure 
AGLDYFEVECTEDGSDNYIKIATTVLQDHNLLSIVEGLHIYIDPKYPLFVATGFIRPPR
CCCCEEEEEECCCCCCCEEEEEEEHHCCCCHHHHHCCEEEEECCCCCEEEEECCCCCCH
SVIKVSDVGNVLLQDDQATIAVGDETYLAAMLKMLWAKLGHDNVDQPDRFTVIIKNTEIP
HHEEECCCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC
KDLRDWVVIDPSQSLFKDLIYAIQVIAPEGFKVRRENYGKNRFSYAASENTLPAKDIEKI
CCCCCCEEECCCHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCEEECCCCCCCCHHHHHHH
IAERFEQMEEALK
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA