| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485375
Identifier: 124485375
GI number: 124485375
Start: 524209
End: 524790
Strand: Reverse
Name: 124485375
Synonym: Mlab_0550
Alternate gene names: NA
Gene position: 524790-524209 (Counterclockwise)
Preceding gene: 124485376
Following gene: 124485374
Centisome position: 29.07
GC content: 52.75
Gene sequence:
>582_bases ATGGCTGGTTTGGACTACTTCGAGGTGGAATGCACCGAAGACGGGTCGGACAACTATATCAAAATCGCCACAACCGTACT GCAGGATCACAACCTCCTCAGTATCGTGGAAGGACTGCACATCTACATCGATCCGAAGTATCCCCTGTTCGTGGCAACGG GATTCATCCGCCCGCCGCGTTCCGTGATAAAGGTCTCGGATGTGGGCAATGTACTGCTTCAGGACGATCAGGCAACGATC GCGGTTGGAGATGAGACCTATCTTGCCGCGATGCTGAAGATGCTTTGGGCCAAACTCGGACACGACAATGTCGATCAACC CGACCGGTTCACGGTGATCATCAAAAATACGGAGATCCCAAAGGATCTGAGAGACTGGGTGGTTATCGACCCGTCCCAGT CGCTCTTTAAGGATCTGATCTACGCGATCCAGGTGATCGCTCCCGAAGGCTTCAAAGTCCGGCGCGAAAACTACGGAAAG AACCGGTTTTCCTATGCGGCAAGCGAAAACACCCTTCCGGCGAAAGATATCGAGAAGATCATCGCCGAAAGATTCGAGCA GATGGAGGAGGCACTGAAATGA
Upstream 100 bases:
>100_bases AACCGAGGTCGTCGTGCCCCATCACGCCCAGTACATCGGGGCGGTCGGCGGGGCACTGCTTTCCTCGGGATTCGTCGATA AAAAGGTGAAGGAGGCGTAA
Downstream 100 bases:
>100_bases TCCTTGTCCCGATCACCTATAAAGGCGGAGTGTACCGTCTCGACGAGGTCGTCGATTATATCGAGGATCTTGGCGGCTAC ATCGTCCAGAGACATAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MAGLDYFEVECTEDGSDNYIKIATTVLQDHNLLSIVEGLHIYIDPKYPLFVATGFIRPPRSVIKVSDVGNVLLQDDQATI AVGDETYLAAMLKMLWAKLGHDNVDQPDRFTVIIKNTEIPKDLRDWVVIDPSQSLFKDLIYAIQVIAPEGFKVRRENYGK NRFSYAASENTLPAKDIEKIIAERFEQMEEALK
Sequences:
>Translated_193_residues MAGLDYFEVECTEDGSDNYIKIATTVLQDHNLLSIVEGLHIYIDPKYPLFVATGFIRPPRSVIKVSDVGNVLLQDDQATI AVGDETYLAAMLKMLWAKLGHDNVDQPDRFTVIIKNTEIPKDLRDWVVIDPSQSLFKDLIYAIQVIAPEGFKVRRENYGK NRFSYAASENTLPAKDIEKIIAERFEQMEEALK >Mature_192_residues AGLDYFEVECTEDGSDNYIKIATTVLQDHNLLSIVEGLHIYIDPKYPLFVATGFIRPPRSVIKVSDVGNVLLQDDQATIA VGDETYLAAMLKMLWAKLGHDNVDQPDRFTVIIKNTEIPKDLRDWVVIDPSQSLFKDLIYAIQVIAPEGFKVRRENYGKN RFSYAASENTLPAKDIEKIIAERFEQMEEALK
Specific function: Unknown
COG id: COG4051
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21910; Mature: 21779
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLDYFEVECTEDGSDNYIKIATTVLQDHNLLSIVEGLHIYIDPKYPLFVATGFIRPPR CCCCCEEEEEECCCCCCCEEEEEEEHHCCCCHHHHHCCEEEEECCCCCEEEEECCCCCCH SVIKVSDVGNVLLQDDQATIAVGDETYLAAMLKMLWAKLGHDNVDQPDRFTVIIKNTEIP HHEEECCCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC KDLRDWVVIDPSQSLFKDLIYAIQVIAPEGFKVRRENYGKNRFSYAASENTLPAKDIEKI CCCCCCEEECCCHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCEEECCCCCCCCHHHHHHH IAERFEQMEEALK HHHHHHHHHHHCC >Mature Secondary Structure AGLDYFEVECTEDGSDNYIKIATTVLQDHNLLSIVEGLHIYIDPKYPLFVATGFIRPPR CCCCEEEEEECCCCCCCEEEEEEEHHCCCCHHHHHCCEEEEECCCCCEEEEECCCCCCH SVIKVSDVGNVLLQDDQATIAVGDETYLAAMLKMLWAKLGHDNVDQPDRFTVIIKNTEIP HHEEECCCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC KDLRDWVVIDPSQSLFKDLIYAIQVIAPEGFKVRRENYGKNRFSYAASENTLPAKDIEKI CCCCCCEEECCCHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCEEECCCCCCCCHHHHHHH IAERFEQMEEALK HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA