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The map label for this gene is 124485365

Identifier: 124485365

GI number: 124485365

Start: 513545

End: 515473

Strand: Reverse

Name: 124485365

Synonym: Mlab_0540

Alternate gene names: NA

Gene position: 515473-513545 (Counterclockwise)

Preceding gene: 124485372

Following gene: 124485364

Centisome position: 28.56

GC content: 58.22

Gene sequence:

>1929_bases
ATGGCGACGATACAAGGGATGAGCGGAGCGGACGTAAAAGCGATGACAGCGGAGCTTGCCGCGCTTTTGCCGCTCTGGAT
CGGGAAAATATATCAGTACGACAATGCCTCGCTTGGGTTCCGGCTGAATGGTGAGGAGAAGGCACGCCATCTTCTGTATG
TGGTGAGAGGCATTCGGGCGCATCTCGTATCCGAACTGCCGCCGGCGCCGAAAAACCCGTCCGGGTTTTCGATGTATCTT
AGGAAATACATCGAGGGGGGCAAGGTCCTCAATATCGAGCAGAAGGCGATCGAGCGGGTCATCATAATAACGATCGGCAA
AGGGCCGTCGGAGTATAAGCTGATCATCGAACTCTTCGACGAAGGAAACCTTATCCTGACAGACGAAAAGTTCACGATCA
TCAATGCCCTTGCCCAGCGGCGGTTCCGGGACCGGGATATCGTCGGCGGCGCAGAGTATGCGATCGAAGCCGTCTGGCCC
GAGAGGCTGACGTTCGAGGAGTTCAAAGAGAAGATCACCGCAGACGAGAACGATATCGTGCGGGCTCTCGCAACGAAACT
GCAGCTCGGCGGCATCCCCTCGGAAGAGATATGTCAGCTTGCGGGCGTCTCGAAGTCGATGCCCTGTAAGTTCGCGACCG
ATGTCCAGCTTCGCCCGGTGTATGAGGCGATGAAAAGCTGGATCGCCAAACTGACCTATGCACGCGATCCGGTGATCGAT
GCGAAGGGAGCGTTCCCGTTCCCCTCACTGGTCCGCGAGCCAAAAGAGCACTTCGCGACGTTTTCGCAGGCGCTCGAGGC
GTTCTATCCAAAACCGGTGGCCGAGAAGGTCATCGAACAGAAGATCAAACTCTCCAAAGAGGAGCGGATCCGAAAACAGC
AGGAAGCAGCCGTCGTCAACTTCGACAAAAAGATCGCCGAGGCGACCGAGATCTCGGAGATCATCTACTCGCATTACGGC
GAGGTGCAGGAGACGATCGACGTTCTTGCGGCCGCAAGCCAGAAGCTTTCCTGGCAGGATATCGCGGCCGTGATCAAAAA
GAGCGACCTGCCCGCCGCAAAACGGATCATCTCGGTGGACCCGAAGAATGCGTCCGTCGTGATCGATCTGCAGGAAAAGC
ACAAGGTCACGATCTTCGTGCACGAAAGTCTGGAGGCAAACGTCGGCAGATACTTCGCCGTCGTGAAAAAGTTCCGGGCG
AAAAAGGCGGGAGCGCTTCGGGCGATGGAAGCAGGCATCGTGCATGCGGAGAAGAAAAAGGCGGCCGGACCCGGCCGACT
CAAGCCGAAATGGTATCACCGTTTCCGGTGGATGGAGACCTCCGACGGCGTGCTTGTGATCGGCGGCCGAAATGCCGACC
AGAACGAGGAGCTTGTCAAGAAGTATATGGAAGGCAAAGACACCTTCCTCCACGCAGATGTCTTCGGAGCGTCCGCGGTG
ATCGTGAAAGGCGTAACGGAACGCATGGATCAGGCGGTCCAGTTTGCCGCGTCCTACTCGCGGGCATGGGCCGGCGGTGG
GGCATCCGTCGATGTGATCGCAGCAAGCCCCAACCAGGTAAGTAAGACGCCCGAGTCGGGAGAGTATGTGGCTCACGGTT
CGTTCGTCATCCGGGGCGAGCGTAAGATCTACAAGGACGTGCCGCTCGAGATCGCGATCGGGGTCAGGACCGAACCGGTC
CTTGCGGTGATCGGCGGAACGCCTTCCGCGATCGAACCGCTGGCTTCGCATTCCGTTCGTCTGGTTCCGGGGACATTCGA
AGGAAACGACGTTGCTAAGAAAGTTCTTCGAAAACTCAAAGAGGCGGTGCCTGAAAGCGAGCAGAAAGCGCTCAAAGCGA
TCCTGAACACCGAGGGCGTAGCCGCGTTCGTGCCGCCGGGCGGGTCCGATCTCAAAGAGCCGGCCCGAGAGGGAGCGGAC
CGCGAATGA

Upstream 100 bases:

>100_bases
TCAAAAGGGAAGCCCTGCCTGATCTGAAAAACCCGCAGTTTCGGGAACGAAATGCAGGGTCGGTTTATAGTTCTGTACAT
CCTATGTATGTTAGCAAAGA

Downstream 100 bases:

>100_bases
AGGCGGAGCTGCCCGAACCGCTGAAAAAAGACGGATTCGGCGAGTATAAACTCATGCCCGAATCGATCGACGATCTCTGG
CATCTTTCGCATCTGATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 642; Mature: 641

Protein sequence:

>642_residues
MATIQGMSGADVKAMTAELAALLPLWIGKIYQYDNASLGFRLNGEEKARHLLYVVRGIRAHLVSELPPAPKNPSGFSMYL
RKYIEGGKVLNIEQKAIERVIIITIGKGPSEYKLIIELFDEGNLILTDEKFTIINALAQRRFRDRDIVGGAEYAIEAVWP
ERLTFEEFKEKITADENDIVRALATKLQLGGIPSEEICQLAGVSKSMPCKFATDVQLRPVYEAMKSWIAKLTYARDPVID
AKGAFPFPSLVREPKEHFATFSQALEAFYPKPVAEKVIEQKIKLSKEERIRKQQEAAVVNFDKKIAEATEISEIIYSHYG
EVQETIDVLAAASQKLSWQDIAAVIKKSDLPAAKRIISVDPKNASVVIDLQEKHKVTIFVHESLEANVGRYFAVVKKFRA
KKAGALRAMEAGIVHAEKKKAAGPGRLKPKWYHRFRWMETSDGVLVIGGRNADQNEELVKKYMEGKDTFLHADVFGASAV
IVKGVTERMDQAVQFAASYSRAWAGGGASVDVIAASPNQVSKTPESGEYVAHGSFVIRGERKIYKDVPLEIAIGVRTEPV
LAVIGGTPSAIEPLASHSVRLVPGTFEGNDVAKKVLRKLKEAVPESEQKALKAILNTEGVAAFVPPGGSDLKEPAREGAD
RE

Sequences:

>Translated_642_residues
MATIQGMSGADVKAMTAELAALLPLWIGKIYQYDNASLGFRLNGEEKARHLLYVVRGIRAHLVSELPPAPKNPSGFSMYL
RKYIEGGKVLNIEQKAIERVIIITIGKGPSEYKLIIELFDEGNLILTDEKFTIINALAQRRFRDRDIVGGAEYAIEAVWP
ERLTFEEFKEKITADENDIVRALATKLQLGGIPSEEICQLAGVSKSMPCKFATDVQLRPVYEAMKSWIAKLTYARDPVID
AKGAFPFPSLVREPKEHFATFSQALEAFYPKPVAEKVIEQKIKLSKEERIRKQQEAAVVNFDKKIAEATEISEIIYSHYG
EVQETIDVLAAASQKLSWQDIAAVIKKSDLPAAKRIISVDPKNASVVIDLQEKHKVTIFVHESLEANVGRYFAVVKKFRA
KKAGALRAMEAGIVHAEKKKAAGPGRLKPKWYHRFRWMETSDGVLVIGGRNADQNEELVKKYMEGKDTFLHADVFGASAV
IVKGVTERMDQAVQFAASYSRAWAGGGASVDVIAASPNQVSKTPESGEYVAHGSFVIRGERKIYKDVPLEIAIGVRTEPV
LAVIGGTPSAIEPLASHSVRLVPGTFEGNDVAKKVLRKLKEAVPESEQKALKAILNTEGVAAFVPPGGSDLKEPAREGAD
RE
>Mature_641_residues
ATIQGMSGADVKAMTAELAALLPLWIGKIYQYDNASLGFRLNGEEKARHLLYVVRGIRAHLVSELPPAPKNPSGFSMYLR
KYIEGGKVLNIEQKAIERVIIITIGKGPSEYKLIIELFDEGNLILTDEKFTIINALAQRRFRDRDIVGGAEYAIEAVWPE
RLTFEEFKEKITADENDIVRALATKLQLGGIPSEEICQLAGVSKSMPCKFATDVQLRPVYEAMKSWIAKLTYARDPVIDA
KGAFPFPSLVREPKEHFATFSQALEAFYPKPVAEKVIEQKIKLSKEERIRKQQEAAVVNFDKKIAEATEISEIIYSHYGE
VQETIDVLAAASQKLSWQDIAAVIKKSDLPAAKRIISVDPKNASVVIDLQEKHKVTIFVHESLEANVGRYFAVVKKFRAK
KAGALRAMEAGIVHAEKKKAAGPGRLKPKWYHRFRWMETSDGVLVIGGRNADQNEELVKKYMEGKDTFLHADVFGASAVI
VKGVTERMDQAVQFAASYSRAWAGGGASVDVIAASPNQVSKTPESGEYVAHGSFVIRGERKIYKDVPLEIAIGVRTEPVL
AVIGGTPSAIEPLASHSVRLVPGTFEGNDVAKKVLRKLKEAVPESEQKALKAILNTEGVAAFVPPGGSDLKEPAREGADR
E

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32130516, Length=660, Percent_Identity=25.3030303030303, Blast_Score=152, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI32565397, Length=626, Percent_Identity=25.8785942492013, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI281362530, Length=343, Percent_Identity=27.4052478134111, Blast_Score=112, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281362528, Length=343, Percent_Identity=27.4052478134111, Blast_Score=112, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616
- InterPro:   IPR010979 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 70731; Mature: 70600

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIQGMSGADVKAMTAELAALLPLWIGKIYQYDNASLGFRLNGEEKARHLLYVVRGIRA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHH
HLVSELPPAPKNPSGFSMYLRKYIEGGKVLNIEQKAIERVIIITIGKGPSEYKLIIELFD
HHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHCEEEEEEECCCCCCEEEEEEEEC
EGNLILTDEKFTIINALAQRRFRDRDIVGGAEYAIEAVWPERLTFEEFKEKITADENDIV
CCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCCHHHHHHHHCCCHHHHH
RALATKLQLGGIPSEEICQLAGVSKSMPCKFATDVQLRPVYEAMKSWIAKLTYARDPVID
HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEECCCEEHHHHHHHHHHHHHHHHCCCCCCC
AKGAFPFPSLVREPKEHFATFSQALEAFYPKPVAEKVIEQKIKLSKEERIRKQQEAAVVN
CCCCCCCHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FDKKIAEATEISEIIYSHYGEVQETIDVLAAASQKLSWQDIAAVIKKSDLPAAKRIISVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHEEEEC
PKNASVVIDLQEKHKVTIFVHESLEANVGRYFAVVKKFRAKKAGALRAMEAGIVHAEKKK
CCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHC
AAGPGRLKPKWYHRFRWMETSDGVLVIGGRNADQNEELVKKYMEGKDTFLHADVFGASAV
CCCCCCCCHHHHHHEEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCHHH
IVKGVTERMDQAVQFAASYSRAWAGGGASVDVIAASPNQVSKTPESGEYVAHGSFVIRGE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEEECC
RKIYKDVPLEIAIGVRTEPVLAVIGGTPSAIEPLASHSVRLVPGTFEGNDVAKKVLRKLK
HHHHHCCCEEEEECCCCCCEEEEECCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHH
EAVPESEQKALKAILNTEGVAAFVPPGGSDLKEPAREGADRE
HHCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
ATIQGMSGADVKAMTAELAALLPLWIGKIYQYDNASLGFRLNGEEKARHLLYVVRGIRA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHH
HLVSELPPAPKNPSGFSMYLRKYIEGGKVLNIEQKAIERVIIITIGKGPSEYKLIIELFD
HHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHCEEEEEEECCCCCCEEEEEEEEC
EGNLILTDEKFTIINALAQRRFRDRDIVGGAEYAIEAVWPERLTFEEFKEKITADENDIV
CCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCCHHHHHHHHCCCHHHHH
RALATKLQLGGIPSEEICQLAGVSKSMPCKFATDVQLRPVYEAMKSWIAKLTYARDPVID
HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEECCCEEHHHHHHHHHHHHHHHHCCCCCCC
AKGAFPFPSLVREPKEHFATFSQALEAFYPKPVAEKVIEQKIKLSKEERIRKQQEAAVVN
CCCCCCCHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FDKKIAEATEISEIIYSHYGEVQETIDVLAAASQKLSWQDIAAVIKKSDLPAAKRIISVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHEEEEC
PKNASVVIDLQEKHKVTIFVHESLEANVGRYFAVVKKFRAKKAGALRAMEAGIVHAEKKK
CCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHC
AAGPGRLKPKWYHRFRWMETSDGVLVIGGRNADQNEELVKKYMEGKDTFLHADVFGASAV
CCCCCCCCHHHHHHEEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCHHH
IVKGVTERMDQAVQFAASYSRAWAGGGASVDVIAASPNQVSKTPESGEYVAHGSFVIRGE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEEECC
RKIYKDVPLEIAIGVRTEPVLAVIGGTPSAIEPLASHSVRLVPGTFEGNDVAKKVLRKLK
HHHHHCCCEEEEECCCCCCEEEEECCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHH
EAVPESEQKALKAILNTEGVAAFVPPGGSDLKEPAREGADRE
HHCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]