| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485295
Identifier: 124485295
GI number: 124485295
Start: 448083
End: 448622
Strand: Reverse
Name: 124485295
Synonym: Mlab_0470
Alternate gene names: NA
Gene position: 448622-448083 (Counterclockwise)
Preceding gene: 124485296
Following gene: 124485294
Centisome position: 24.85
GC content: 53.89
Gene sequence:
>540_bases ATGACAGTAGATTTACGCGACAAAGTTGAGGAAGACCGCGGTCTGATCAAAAAAATCCAGCTCTGCGTCCCGGGATTTCG GGGATACCGGCAGAAAGAGGATATCCGGATTGCCGATTCGATGCTGCGCCTGCAGCTTGCAGACGAGTTGAAAAACAACG TTCTCCTGCCTCTGGAGCAGACCCGCGAGTCGGCCAGCCGGGCACTCGAACTTGATCTGATGAACGATCTGGCCGCGGCA ATCTCGCAGGCAAAGACCGCAGAAGCAAAGATCCGCCATGCCGAGCAGGGATACTCAGGCATCTCCGCAGCAACCCGTGT CAAGACGCCGGAACTGAACACCCTGTATGAATATGATCTCGCATTGCTTGACGGAATTCGTGGAATCGGGGACCTGGCGA AGGCCGCATTCAGCAGTGCCGATGCAGGAAACTTTAACAAAACAGCAGACAGACTCCGGGAGATCAAATCCGGGTTCAGC GAGTTTACGGTAATTTTCGACAAACGCAGCGTTGACATGGCAGGCATTGGTGCATTCTAA
Upstream 100 bases:
>100_bases ATATTTCCGGTCATCAGCACGCCGGTCCTGATTGGAGCAGCGCTGGTGATCGTGGCGGCAGGTGCCATTATTTTCCTGAT ACTAAAAAAATAAACAAACC
Downstream 100 bases:
>100_bases TGAGTTTCTTCTCAAAAACAAACAAAACCATCGGCTCCGGTTCGGATATCGAGGGTGCAGAATCCAGAAAAGGCTTCTAC TGGGTCGATGATCAGAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTVDLRDKVEEDRGLIKKIQLCVPGFRGYRQKEDIRIADSMLRLQLADELKNNVLLPLEQTRESASRALELDLMNDLAAA ISQAKTAEAKIRHAEQGYSGISAATRVKTPELNTLYEYDLALLDGIRGIGDLAKAAFSSADAGNFNKTADRLREIKSGFS EFTVIFDKRSVDMAGIGAF
Sequences:
>Translated_179_residues MTVDLRDKVEEDRGLIKKIQLCVPGFRGYRQKEDIRIADSMLRLQLADELKNNVLLPLEQTRESASRALELDLMNDLAAA ISQAKTAEAKIRHAEQGYSGISAATRVKTPELNTLYEYDLALLDGIRGIGDLAKAAFSSADAGNFNKTADRLREIKSGFS EFTVIFDKRSVDMAGIGAF >Mature_178_residues TVDLRDKVEEDRGLIKKIQLCVPGFRGYRQKEDIRIADSMLRLQLADELKNNVLLPLEQTRESASRALELDLMNDLAAAI SQAKTAEAKIRHAEQGYSGISAATRVKTPELNTLYEYDLALLDGIRGIGDLAKAAFSSADAGNFNKTADRLREIKSGFSE FTVIFDKRSVDMAGIGAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19784; Mature: 19653
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDLRDKVEEDRGLIKKIQLCVPGFRGYRQKEDIRIADSMLRLQLADELKNNVLLPLEQ CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCHHH TRESASRALELDLMNDLAAAISQAKTAEAKIRHAEQGYSGISAATRVKTPELNTLYEYDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHH ALLDGIRGIGDLAKAAFSSADAGNFNKTADRLREIKSGFSEFTVIFDKRSVDMAGIGAF HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCC >Mature Secondary Structure TVDLRDKVEEDRGLIKKIQLCVPGFRGYRQKEDIRIADSMLRLQLADELKNNVLLPLEQ CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCHHH TRESASRALELDLMNDLAAAISQAKTAEAKIRHAEQGYSGISAATRVKTPELNTLYEYDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHH ALLDGIRGIGDLAKAAFSSADAGNFNKTADRLREIKSGFSEFTVIFDKRSVDMAGIGAF HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA