Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

Click here to switch to the map view.

The map label for this gene is 124485295

Identifier: 124485295

GI number: 124485295

Start: 448083

End: 448622

Strand: Reverse

Name: 124485295

Synonym: Mlab_0470

Alternate gene names: NA

Gene position: 448622-448083 (Counterclockwise)

Preceding gene: 124485296

Following gene: 124485294

Centisome position: 24.85

GC content: 53.89

Gene sequence:

>540_bases
ATGACAGTAGATTTACGCGACAAAGTTGAGGAAGACCGCGGTCTGATCAAAAAAATCCAGCTCTGCGTCCCGGGATTTCG
GGGATACCGGCAGAAAGAGGATATCCGGATTGCCGATTCGATGCTGCGCCTGCAGCTTGCAGACGAGTTGAAAAACAACG
TTCTCCTGCCTCTGGAGCAGACCCGCGAGTCGGCCAGCCGGGCACTCGAACTTGATCTGATGAACGATCTGGCCGCGGCA
ATCTCGCAGGCAAAGACCGCAGAAGCAAAGATCCGCCATGCCGAGCAGGGATACTCAGGCATCTCCGCAGCAACCCGTGT
CAAGACGCCGGAACTGAACACCCTGTATGAATATGATCTCGCATTGCTTGACGGAATTCGTGGAATCGGGGACCTGGCGA
AGGCCGCATTCAGCAGTGCCGATGCAGGAAACTTTAACAAAACAGCAGACAGACTCCGGGAGATCAAATCCGGGTTCAGC
GAGTTTACGGTAATTTTCGACAAACGCAGCGTTGACATGGCAGGCATTGGTGCATTCTAA

Upstream 100 bases:

>100_bases
ATATTTCCGGTCATCAGCACGCCGGTCCTGATTGGAGCAGCGCTGGTGATCGTGGCGGCAGGTGCCATTATTTTCCTGAT
ACTAAAAAAATAAACAAACC

Downstream 100 bases:

>100_bases
TGAGTTTCTTCTCAAAAACAAACAAAACCATCGGCTCCGGTTCGGATATCGAGGGTGCAGAATCCAGAAAAGGCTTCTAC
TGGGTCGATGATCAGAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTVDLRDKVEEDRGLIKKIQLCVPGFRGYRQKEDIRIADSMLRLQLADELKNNVLLPLEQTRESASRALELDLMNDLAAA
ISQAKTAEAKIRHAEQGYSGISAATRVKTPELNTLYEYDLALLDGIRGIGDLAKAAFSSADAGNFNKTADRLREIKSGFS
EFTVIFDKRSVDMAGIGAF

Sequences:

>Translated_179_residues
MTVDLRDKVEEDRGLIKKIQLCVPGFRGYRQKEDIRIADSMLRLQLADELKNNVLLPLEQTRESASRALELDLMNDLAAA
ISQAKTAEAKIRHAEQGYSGISAATRVKTPELNTLYEYDLALLDGIRGIGDLAKAAFSSADAGNFNKTADRLREIKSGFS
EFTVIFDKRSVDMAGIGAF
>Mature_178_residues
TVDLRDKVEEDRGLIKKIQLCVPGFRGYRQKEDIRIADSMLRLQLADELKNNVLLPLEQTRESASRALELDLMNDLAAAI
SQAKTAEAKIRHAEQGYSGISAATRVKTPELNTLYEYDLALLDGIRGIGDLAKAAFSSADAGNFNKTADRLREIKSGFSE
FTVIFDKRSVDMAGIGAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19784; Mature: 19653

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVDLRDKVEEDRGLIKKIQLCVPGFRGYRQKEDIRIADSMLRLQLADELKNNVLLPLEQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCHHH
TRESASRALELDLMNDLAAAISQAKTAEAKIRHAEQGYSGISAATRVKTPELNTLYEYDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHH
ALLDGIRGIGDLAKAAFSSADAGNFNKTADRLREIKSGFSEFTVIFDKRSVDMAGIGAF
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
TVDLRDKVEEDRGLIKKIQLCVPGFRGYRQKEDIRIADSMLRLQLADELKNNVLLPLEQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCHHH
TRESASRALELDLMNDLAAAISQAKTAEAKIRHAEQGYSGISAATRVKTPELNTLYEYDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHH
ALLDGIRGIGDLAKAAFSSADAGNFNKTADRLREIKSGFSEFTVIFDKRSVDMAGIGAF
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA